EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000005626 (Gene tree)
Gene ID: 105016466
Gene Symbol: rnf17
Alias: TDRD4|im:7147535|wu:fj98c04
Full Name: ring finger protein 17
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 24905 bases
Position: chrLG16:23634099-23659003
Accession: 105016466
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000028868	TUDOR	PF00567.24	1.9e-77	1	5
ENSELUP00000028868	TUDOR	PF00567.24	1.9e-77	2	5
ENSELUP00000028868	TUDOR	PF00567.24	1.9e-77	3	5
ENSELUP00000028868	TUDOR	PF00567.24	1.9e-77	4	5
ENSELUP00000028868	TUDOR	PF00567.24	1.9e-77	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000012301	-	6549	XM_013137997	ENSELUP00000028868	1614 (aa)	XP_012993451	UPI000661E3B0

Gene Model

Click here to download ENSELUG00000005626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005626's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005626	rnf17	98	32.436	ENSG00000132972	RNF17	99	38.743	Homo_sapiens
ENSELUG00000005626	rnf17	94	48.892	ENSAPOG00000017034	rnf17	99	48.220	Acanthochromis_polyacanthus
ENSELUG00000005626	rnf17	98	32.314	ENSAMEG00000017340	RNF17	91	35.614	Ailuropoda_melanoleuca
ENSELUG00000005626	rnf17	99	51.042	ENSAOCG00000018283	rnf17	99	51.330	Amphiprion_ocellaris
ENSELUG00000005626	rnf17	84	50.923	ENSAPEG00000022338	rnf17	93	51.426	Amphiprion_percula
ENSELUG00000005626	rnf17	90	49.194	ENSATEG00000002067	rnf17	99	48.858	Anabas_testudineus
ENSELUG00000005626	rnf17	89	32.103	ENSAPLG00000003969	RNF17	83	34.588	Anas_platyrhynchos
ENSELUG00000005626	rnf17	74	35.697	ENSACAG00000001418	RNF17	75	35.697	Anolis_carolinensis
ENSELUG00000005626	rnf17	99	48.422	ENSACLG00000018279	rnf17	99	48.592	Astatotilapia_calliptera
ENSELUG00000005626	rnf17	91	52.922	ENSAMXG00000011002	rnf17	99	53.172	Astyanax_mexicanus
ENSELUG00000005626	rnf17	98	32.418	ENSCJAG00000018937	RNF17	99	39.349	Callithrix_jacchus
ENSELUG00000005626	rnf17	86	35.299	ENSCAFG00000007418	RNF17	89	35.436	Canis_familiaris
ENSELUG00000005626	rnf17	98	32.032	ENSCHIG00000026716	RNF17	99	37.004	Capra_hircus
ENSELUG00000005626	rnf17	90	35.524	ENSTSYG00000000365	RNF17	99	37.202	Carlito_syrichta
ENSELUG00000005626	rnf17	74	30.212	ENSCAPG00000012908	RNF17	89	30.269	Cavia_aperea
ENSELUG00000005626	rnf17	98	32.569	ENSCCAG00000026725	RNF17	99	38.304	Cebus_capucinus
ENSELUG00000005626	rnf17	98	32.895	ENSCATG00000040352	RNF17	99	38.743	Cercocebus_atys
ENSELUG00000005626	rnf17	87	36.054	ENSCLAG00000004127	RNF17	88	36.054	Chinchilla_lanigera
ENSELUG00000005626	rnf17	98	32.935	ENSCSAG00000018019	RNF17	97	32.995	Chlorocebus_sabaeus
ENSELUG00000005626	rnf17	64	50.370	ENSCHOG00000013310	RNF17	57	50.370	Choloepus_hoffmanni
ENSELUG00000005626	rnf17	93	33.567	ENSCPBG00000020920	RNF17	88	37.058	Chrysemys_picta_bellii
ENSELUG00000005626	rnf17	98	32.515	ENSCANG00000032927	RNF17	99	38.889	Colobus_angolensis_palliatus
ENSELUG00000005626	rnf17	89	35.533	ENSCGRG00001022658	Rnf17	88	35.533	Cricetulus_griseus_chok1gshd
ENSELUG00000005626	rnf17	89	35.533	ENSCGRG00000009924	Rnf17	88	35.533	Cricetulus_griseus_crigri
ENSELUG00000005626	rnf17	89	46.844	ENSCSEG00000008626	rnf17	96	45.141	Cynoglossus_semilaevis
ENSELUG00000005626	rnf17	72	57.726	ENSCVAG00000017008	rnf17	92	57.726	Cyprinodon_variegatus
ENSELUG00000005626	rnf17	99	47.754	ENSDARG00000056387	rnf17	100	47.677	Danio_rerio
ENSELUG00000005626	rnf17	98	32.429	ENSDNOG00000006115	RNF17	97	32.355	Dasypus_novemcinctus
ENSELUG00000005626	rnf17	98	32.879	ENSECAG00000017152	RNF17	96	32.938	Equus_caballus
ENSELUG00000005626	rnf17	60	32.453	ENSEEUG00000000332	RNF17	67	31.985	Erinaceus_europaeus
ENSELUG00000005626	rnf17	91	35.957	ENSFCAG00000004914	RNF17	99	37.097	Felis_catus
ENSELUG00000005626	rnf17	74	34.223	ENSFALG00000008766	RNF17	79	34.223	Ficedula_albicollis
ENSELUG00000005626	rnf17	87	34.679	ENSFDAG00000017857	RNF17	87	34.893	Fukomys_damarensis
ENSELUG00000005626	rnf17	99	47.304	ENSFHEG00000014822	rnf17	99	46.998	Fundulus_heteroclitus
ENSELUG00000005626	rnf17	53	44.612	ENSGMOG00000015560	-	100	44.612	Gadus_morhua
ENSELUG00000005626	rnf17	83	48.608	ENSGAFG00000004463	rnf17	97	48.590	Gambusia_affinis
ENSELUG00000005626	rnf17	92	31.642	ENSGAGG00000016999	RNF17	71	35.150	Gopherus_agassizii
ENSELUG00000005626	rnf17	98	32.455	ENSGGOG00000014491	RNF17	99	38.743	Gorilla_gorilla
ENSELUG00000005626	rnf17	99	48.422	ENSHBUG00000003554	rnf17	99	48.592	Haplochromis_burtoni
ENSELUG00000005626	rnf17	87	35.883	ENSHGLG00000007270	RNF17	87	36.177	Heterocephalus_glaber_female
ENSELUG00000005626	rnf17	87	35.804	ENSHGLG00100017393	RNF17	88	36.098	Heterocephalus_glaber_male
ENSELUG00000005626	rnf17	87	42.219	ENSHCOG00000017676	rnf17	99	42.101	Hippocampus_comes
ENSELUG00000005626	rnf17	86	53.523	ENSIPUG00000001087	rnf17	92	53.523	Ictalurus_punctatus
ENSELUG00000005626	rnf17	87	35.657	ENSJJAG00000016584	Rnf17	87	35.657	Jaculus_jaculus
ENSELUG00000005626	rnf17	99	48.225	ENSKMAG00000013403	rnf17	99	48.250	Kryptolebias_marmoratus
ENSELUG00000005626	rnf17	91	48.156	ENSLBEG00000014910	rnf17	96	47.545	Labrus_bergylta
ENSELUG00000005626	rnf17	85	35.289	ENSLACG00000000323	RNF17	100	35.124	Latimeria_chalumnae
ENSELUG00000005626	rnf17	99	40.671	ENSLOCG00000010768	rnf17	91	44.574	Lepisosteus_oculatus
ENSELUG00000005626	rnf17	98	32.835	ENSMFAG00000032388	RNF17	99	38.889	Macaca_fascicularis
ENSELUG00000005626	rnf17	98	32.955	ENSMMUG00000014610	RNF17	99	39.035	Macaca_mulatta
ENSELUG00000005626	rnf17	98	32.835	ENSMNEG00000011234	RNF17	99	38.889	Macaca_nemestrina
ENSELUG00000005626	rnf17	98	33.193	ENSMLEG00000030227	RNF17	97	33.193	Mandrillus_leucophaeus
ENSELUG00000005626	rnf17	81	78.788	ENSMAMG00000020403	rnf17	96	78.788	Mastacembelus_armatus
ENSELUG00000005626	rnf17	99	48.422	ENSMZEG00005019166	rnf17	99	48.592	Maylandia_zebra
ENSELUG00000005626	rnf17	74	33.759	ENSMGAG00000015138	RNF17	96	33.759	Meleagris_gallopavo
ENSELUG00000005626	rnf17	88	35.047	ENSMAUG00000004788	Rnf17	89	34.650	Mesocricetus_auratus
ENSELUG00000005626	rnf17	89	35.459	ENSMICG00000010364	RNF17	99	37.445	Microcebus_murinus
ENSELUG00000005626	rnf17	59	36.648	ENSMOCG00000011818	-	99	36.648	Microtus_ochrogaster
ENSELUG00000005626	rnf17	75	58.389	ENSMMOG00000019514	rnf17	92	58.389	Mola_mola
ENSELUG00000005626	rnf17	98	32.720	ENSMODG00000007827	RNF17	89	36.306	Monodelphis_domestica
ENSELUG00000005626	rnf17	96	45.907	ENSMALG00000016943	rnf17	99	45.720	Monopterus_albus
ENSELUG00000005626	rnf17	89	36.111	MGP_CAROLIEiJ_G0019337	Rnf17	87	36.111	Mus_caroli
ENSELUG00000005626	rnf17	89	36.241	ENSMUSG00000000365	Rnf17	87	36.241	Mus_musculus
ENSELUG00000005626	rnf17	89	35.686	MGP_PahariEiJ_G0030355	Rnf17	87	35.686	Mus_pahari
ENSELUG00000005626	rnf17	89	36.568	MGP_SPRETEiJ_G0020228	Rnf17	87	36.568	Mus_spretus
ENSELUG00000005626	rnf17	98	32.452	ENSMPUG00000013305	RNF17	92	35.597	Mustela_putorius_furo
ENSELUG00000005626	rnf17	89	36.378	ENSMLUG00000003903	RNF17	97	32.917	Myotis_lucifugus
ENSELUG00000005626	rnf17	89	36.298	ENSNGAG00000013553	Rnf17	88	36.488	Nannospalax_galili
ENSELUG00000005626	rnf17	78	48.996	ENSNBRG00000012006	rnf17	92	48.996	Neolamprologus_brichardi
ENSELUG00000005626	rnf17	98	33.213	ENSNLEG00000013780	RNF17	99	38.881	Nomascus_leucogenys
ENSELUG00000005626	rnf17	66	38.318	ENSOPRG00000016743	-	69	38.318	Ochotona_princeps
ENSELUG00000005626	rnf17	99	48.444	ENSONIG00000015746	rnf17	100	52.196	Oreochromis_niloticus
ENSELUG00000005626	rnf17	99	32.609	ENSOCUG00000007384	RNF17	92	36.709	Oryctolagus_cuniculus
ENSELUG00000005626	rnf17	89	45.492	ENSORLG00000012818	rnf17	99	45.606	Oryzias_latipes
ENSELUG00000005626	rnf17	99	45.466	ENSORLG00020009879	-	99	45.629	Oryzias_latipes_hni
ENSELUG00000005626	rnf17	99	45.050	ENSORLG00015013027	-	99	45.567	Oryzias_latipes_hsok
ENSELUG00000005626	rnf17	76	46.396	ENSOMEG00000009891	rnf17	96	46.396	Oryzias_melastigma
ENSELUG00000005626	rnf17	98	31.974	ENSOGAG00000014803	RNF17	97	31.799	Otolemur_garnettii
ENSELUG00000005626	rnf17	98	32.450	ENSOARG00000014641	RNF17	99	32.390	Ovis_aries
ENSELUG00000005626	rnf17	78	35.515	ENSPPAG00000028779	RNF17	99	38.913	Pan_paniscus
ENSELUG00000005626	rnf17	91	36.034	ENSPPRG00000009230	RNF17	99	36.950	Panthera_pardus
ENSELUG00000005626	rnf17	91	36.034	ENSPTIG00000001738	RNF17	99	36.756	Panthera_tigris_altaica
ENSELUG00000005626	rnf17	98	32.473	ENSPTRG00000005713	RNF17	99	38.913	Pan_troglodytes
ENSELUG00000005626	rnf17	98	33.133	ENSPANG00000007640	RNF17	99	38.743	Papio_anubis
ENSELUG00000005626	rnf17	78	50.789	ENSPKIG00000001648	rnf17	91	52.113	Paramormyrops_kingsleyae
ENSELUG00000005626	rnf17	74	36.591	ENSPSIG00000011245	RNF17	99	36.591	Pelodiscus_sinensis
ENSELUG00000005626	rnf17	89	36.443	ENSPEMG00000008693	Rnf17	88	36.443	Peromyscus_maniculatus_bairdii
ENSELUG00000005626	rnf17	69	34.824	ENSPCIG00000009190	-	93	34.538	Phascolarctos_cinereus
ENSELUG00000005626	rnf17	99	48.024	ENSPFOG00000007124	rnf17	99	48.297	Poecilia_formosa
ENSELUG00000005626	rnf17	99	47.768	ENSPLAG00000006198	rnf17	99	48.775	Poecilia_latipinna
ENSELUG00000005626	rnf17	99	47.706	ENSPMEG00000022432	rnf17	99	48.713	Poecilia_mexicana
ENSELUG00000005626	rnf17	80	53.846	ENSPREG00000001414	rnf17	91	53.846	Poecilia_reticulata
ENSELUG00000005626	rnf17	98	32.994	ENSPPYG00000005215	RNF17	97	33.054	Pongo_abelii
ENSELUG00000005626	rnf17	68	32.624	ENSPCOG00000020211	RNF17	86	36.364	Propithecus_coquereli
ENSELUG00000005626	rnf17	85	48.921	ENSPVAG00000013021	RNF17	84	48.921	Pteropus_vampyrus
ENSELUG00000005626	rnf17	87	64.155	ENSPNAG00000027505	rnf17	99	56.245	Pygocentrus_nattereri
ENSELUG00000005626	rnf17	87	36.105	ENSRNOG00000008059	Rnf17	87	36.105	Rattus_norvegicus
ENSELUG00000005626	rnf17	98	32.384	ENSRBIG00000027010	RNF17	97	32.700	Rhinopithecus_bieti
ENSELUG00000005626	rnf17	98	33.113	ENSRROG00000022801	RNF17	99	38.889	Rhinopithecus_roxellana
ENSELUG00000005626	rnf17	98	32.671	ENSSBOG00000021661	RNF17	99	39.124	Saimiri_boliviensis_boliviensis
ENSELUG00000005626	rnf17	88	35.987	ENSSHAG00000005609	RNF17	88	35.987	Sarcophilus_harrisii
ENSELUG00000005626	rnf17	74	49.414	ENSSFOG00015023037	rnf17	89	49.414	Scleropages_formosus
ENSELUG00000005626	rnf17	91	47.284	ENSSMAG00000007429	rnf17	98	45.308	Scophthalmus_maximus
ENSELUG00000005626	rnf17	91	50.501	ENSSLDG00000019577	rnf17	99	50.766	Seriola_lalandi_dorsalis
ENSELUG00000005626	rnf17	69	36.222	ENSSARG00000003016	RNF17	64	36.222	Sorex_araneus
ENSELUG00000005626	rnf17	73	37.101	ENSSPUG00000008917	RNF17	80	36.653	Sphenodon_punctatus
ENSELUG00000005626	rnf17	89	48.400	ENSSPAG00000001925	rnf17	99	48.895	Stegastes_partitus
ENSELUG00000005626	rnf17	76	36.292	ENSSSCG00000009572	RNF17	83	36.292	Sus_scrofa
ENSELUG00000005626	rnf17	51	32.597	ENSTGUG00000011267	-	100	32.507	Taeniopygia_guttata
ENSELUG00000005626	rnf17	99	43.441	ENSTRUG00000015498	rnf17	98	48.379	Takifugu_rubripes
ENSELUG00000005626	rnf17	73	47.477	ENSTNIG00000015681	rnf17	99	47.477	Tetraodon_nigroviridis
ENSELUG00000005626	rnf17	61	43.172	ENSTBEG00000000282	RNF17	63	43.172	Tupaia_belangeri
ENSELUG00000005626	rnf17	98	31.284	ENSTTRG00000012698	RNF17	97	31.325	Tursiops_truncatus
ENSELUG00000005626	rnf17	86	42.308	ENSVPAG00000011388	RNF17	77	42.308	Vicugna_pacos
ENSELUG00000005626	rnf17	88	35.737	ENSVVUG00000006226	RNF17	89	36.129	Vulpes_vulpes
ENSELUG00000005626	rnf17	71	33.055	ENSXETG00000034020	RNF17	99	43.103	Xenopus_tropicalis
ENSELUG00000005626	rnf17	91	46.390	ENSXCOG00000018295	rnf17	99	47.039	Xiphophorus_couchianus
ENSELUG00000005626	rnf17	91	47.308	ENSXMAG00000014747	rnf17	99	47.577	Xiphophorus_maculatus