EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000005696 (Gene tree)
Gene ID: 105013571
Gene Symbol: sall4
Alias: cb372|cb614|ik:tdsubc_2c1|sb:cb372|sb:cb614|wu:fa01g03|xx:tdsubc_2c1
Full Name: spalt like transcription factor 4
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 8433 bases
Position: chrLG12:9083722-9092154
Accession: 105013571
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000004537	zf-C2H2	PF00096.26	1.4e-27	1	6
ENSELUP00000004537	zf-C2H2	PF00096.26	1.4e-27	2	6
ENSELUP00000004537	zf-C2H2	PF00096.26	1.4e-27	3	6
ENSELUP00000004537	zf-C2H2	PF00096.26	1.4e-27	4	6
ENSELUP00000004537	zf-C2H2	PF00096.26	1.4e-27	5	6
ENSELUP00000004537	zf-C2H2	PF00096.26	1.4e-27	6	6
ENSELUP00000004541	zf-C2H2	PF00096.26	1.9e-27	1	6
ENSELUP00000004541	zf-C2H2	PF00096.26	1.9e-27	2	6
ENSELUP00000004541	zf-C2H2	PF00096.26	1.9e-27	3	6
ENSELUP00000004541	zf-C2H2	PF00096.26	1.9e-27	4	6
ENSELUP00000004541	zf-C2H2	PF00096.26	1.9e-27	5	6
ENSELUP00000004541	zf-C2H2	PF00096.26	1.9e-27	6	6
ENSELUP00000004555	zf-C2H2	PF00096.26	1.9e-27	1	6
ENSELUP00000004555	zf-C2H2	PF00096.26	1.9e-27	2	6
ENSELUP00000004555	zf-C2H2	PF00096.26	1.9e-27	3	6
ENSELUP00000004555	zf-C2H2	PF00096.26	1.9e-27	4	6
ENSELUP00000004555	zf-C2H2	PF00096.26	1.9e-27	5	6
ENSELUP00000004555	zf-C2H2	PF00096.26	1.9e-27	6	6
ENSELUP00000004537	zf-met	PF12874.7	4.4e-12	1	2
ENSELUP00000004537	zf-met	PF12874.7	4.4e-12	2	2
ENSELUP00000004555	zf-met	PF12874.7	2.1e-11	1	2
ENSELUP00000004555	zf-met	PF12874.7	2.1e-11	2	2
ENSELUP00000004541	zf-met	PF12874.7	2.2e-11	1	2
ENSELUP00000004541	zf-met	PF12874.7	2.2e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000012173	-	5866	-	ENSELUP00000004541	1128 (aa)	-	-
ENSELUT00000012184	-	5952	-	ENSELUP00000004537	1079 (aa)	-	-
ENSELUT00000012155	-	5928	XM_010875154	ENSELUP00000004555	1120 (aa)	XP_010873456	UPI00057650D8

Gene Model

Click here to download ENSELUG00000005696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005696's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000005696	sall4	66	67.308	ENSELUG00000006159	sall1a	62	67.308
ENSELUG00000005696	sall4	56	65.385	ENSELUG00000017774	-	75	65.385
ENSELUG00000005696	sall4	89	65.385	ENSELUG00000020351	sall3a	86	37.899
ENSELUG00000005696	sall4	89	65.385	ENSELUG00000009541	sall3b	78	65.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005696	sall4	100	44.331	ENSG00000101115	SALL4	100	59.615	Homo_sapiens
ENSELUG00000005696	sall4	100	66.085	ENSAPOG00000002465	sall4	100	65.899	Acanthochromis_polyacanthus
ENSELUG00000005696	sall4	99	46.126	ENSAMEG00000013250	-	99	46.126	Ailuropoda_melanoleuca
ENSELUG00000005696	sall4	100	64.184	ENSACIG00000017298	sall4	100	64.184	Amphilophus_citrinellus
ENSELUG00000005696	sall4	100	66.195	ENSAOCG00000023678	sall4	100	66.195	Amphiprion_ocellaris
ENSELUG00000005696	sall4	100	66.549	ENSAPEG00000000751	sall4	100	66.549	Amphiprion_percula
ENSELUG00000005696	sall4	100	66.016	ENSATEG00000024480	sall4	100	66.016	Anabas_testudineus
ENSELUG00000005696	sall4	100	50.426	ENSAPLG00000006498	SALL4	100	51.107	Anas_platyrhynchos
ENSELUG00000005696	sall4	100	51.504	ENSACAG00000012748	SALL4	100	51.176	Anolis_carolinensis
ENSELUG00000005696	sall4	100	43.919	ENSANAG00000023352	SALL4	86	67.308	Aotus_nancymaae
ENSELUG00000005696	sall4	100	64.539	ENSACLG00000017851	sall4	100	64.539	Astatotilapia_calliptera
ENSELUG00000005696	sall4	99	67.252	ENSAMXG00000001254	sall4	99	67.954	Astyanax_mexicanus
ENSELUG00000005696	sall4	93	67.308	ENSBTAG00000003101	SALL4	100	41.723	Bos_taurus
ENSELUG00000005696	sall4	83	46.674	ENSCJAG00000000591	SALL4	99	47.346	Callithrix_jacchus
ENSELUG00000005696	sall4	100	44.027	ENSCAFG00000011738	-	100	44.198	Canis_familiaris
ENSELUG00000005696	sall4	100	43.942	ENSCAFG00020021870	SALL4	100	44.113	Canis_lupus_dingo
ENSELUG00000005696	sall4	93	67.308	ENSCHIG00000026270	SALL4	100	42.159	Capra_hircus
ENSELUG00000005696	sall4	100	43.515	ENSTSYG00000007359	SALL4	100	51.004	Carlito_syrichta
ENSELUG00000005696	sall4	99	44.083	ENSCAPG00000012135	SALL4	95	44.284	Cavia_aperea
ENSELUG00000005696	sall4	100	40.782	ENSCCAG00000029512	-	100	62.000	Cebus_capucinus
ENSELUG00000005696	sall4	100	44.670	ENSCATG00000030757	SALL4	86	67.308	Cercocebus_atys
ENSELUG00000005696	sall4	100	43.089	ENSCLAG00000010479	SALL4	86	65.385	Chinchilla_lanigera
ENSELUG00000005696	sall4	100	44.974	ENSCSAG00000015269	SALL4	100	45.416	Chlorocebus_sabaeus
ENSELUG00000005696	sall4	99	51.385	ENSCPBG00000014995	SALL4	99	52.007	Chrysemys_picta_bellii
ENSELUG00000005696	sall4	100	44.719	ENSCANG00000036463	SALL4	100	45.246	Colobus_angolensis_palliatus
ENSELUG00000005696	sall4	100	42.700	ENSCGRG00001019569	Sall4	100	46.970	Cricetulus_griseus_chok1gshd
ENSELUG00000005696	sall4	100	42.616	ENSCGRG00000000462	Sall4	100	77.778	Cricetulus_griseus_crigri
ENSELUG00000005696	sall4	100	63.508	ENSCSEG00000014604	sall4	100	64.071	Cynoglossus_semilaevis
ENSELUG00000005696	sall4	100	65.190	ENSCVAG00000010815	sall4	100	65.190	Cyprinodon_variegatus
ENSELUG00000005696	sall4	99	66.144	ENSDARG00000044485	sall4	99	66.163	Danio_rerio
ENSELUG00000005696	sall4	100	43.782	ENSDNOG00000040633	SALL4	100	43.671	Dasypus_novemcinctus
ENSELUG00000005696	sall4	100	41.141	ENSDORG00000012841	Sall4	100	71.605	Dipodomys_ordii
ENSELUG00000005696	sall4	62	65.385	ENSETEG00000012475	-	51	65.385	Echinops_telfairi
ENSELUG00000005696	sall4	64	56.897	ENSEBUG00000015425	-	60	59.184	Eptatretus_burgeri
ENSELUG00000005696	sall4	100	44.313	ENSECAG00000018533	SALL4	100	44.463	Equus_caballus
ENSELUG00000005696	sall4	100	42.675	ENSEEUG00000003649	SALL4	99	42.869	Erinaceus_europaeus
ENSELUG00000005696	sall4	100	43.172	ENSFCAG00000002822	SALL4	88	67.308	Felis_catus
ENSELUG00000005696	sall4	100	49.197	ENSFALG00000013149	SALL4	100	50.507	Ficedula_albicollis
ENSELUG00000005696	sall4	100	42.404	ENSFDAG00000017812	SALL4	88	63.462	Fukomys_damarensis
ENSELUG00000005696	sall4	100	63.793	ENSFHEG00000014187	sall4	100	63.517	Fundulus_heteroclitus
ENSELUG00000005696	sall4	100	65.138	ENSGMOG00000003822	sall4	100	65.075	Gadus_morhua
ENSELUG00000005696	sall4	100	50.555	ENSGALG00000041365	SALL4	100	51.291	Gallus_gallus
ENSELUG00000005696	sall4	100	64.738	ENSGAFG00000019925	sall4	100	64.425	Gambusia_affinis
ENSELUG00000005696	sall4	100	63.901	ENSGACG00000011124	sall4	100	63.901	Gasterosteus_aculeatus
ENSELUG00000005696	sall4	99	51.561	ENSGAGG00000002297	SALL4	99	51.928	Gopherus_agassizii
ENSELUG00000005696	sall4	100	44.482	ENSGGOG00000001832	SALL4	86	67.308	Gorilla_gorilla
ENSELUG00000005696	sall4	100	64.539	ENSHBUG00000007327	sall4	100	64.362	Haplochromis_burtoni
ENSELUG00000005696	sall4	99	43.062	ENSHGLG00000009043	SALL4	96	43.339	Heterocephalus_glaber_female
ENSELUG00000005696	sall4	99	43.062	ENSHGLG00100002722	SALL4	96	43.339	Heterocephalus_glaber_male
ENSELUG00000005696	sall4	100	63.186	ENSHCOG00000008519	sall4	100	63.186	Hippocampus_comes
ENSELUG00000005696	sall4	99	67.201	ENSIPUG00000019170	sall4	99	67.201	Ictalurus_punctatus
ENSELUG00000005696	sall4	65	53.333	ENSSTOG00000025002	SALL4	100	83.099	Ictidomys_tridecemlineatus
ENSELUG00000005696	sall4	100	44.211	ENSJJAG00000020688	Sall4	99	84.507	Jaculus_jaculus
ENSELUG00000005696	sall4	100	64.576	ENSKMAG00000002501	sall4	100	64.444	Kryptolebias_marmoratus
ENSELUG00000005696	sall4	100	65.691	ENSLBEG00000019951	sall4	100	65.691	Labrus_bergylta
ENSELUG00000005696	sall4	99	47.296	ENSLACG00000013898	SALL4	99	63.158	Latimeria_chalumnae
ENSELUG00000005696	sall4	100	64.885	ENSLOCG00000002427	sall4	100	64.742	Lepisosteus_oculatus
ENSELUG00000005696	sall4	100	44.454	ENSLAFG00000004309	SALL4	100	44.539	Loxodonta_africana
ENSELUG00000005696	sall4	100	44.936	ENSMFAG00000027169	SALL4	100	45.416	Macaca_fascicularis
ENSELUG00000005696	sall4	90	46.774	ENSMMUG00000003870	SALL4	100	59.615	Macaca_mulatta
ENSELUG00000005696	sall4	90	46.774	ENSMNEG00000035995	SALL4	86	67.308	Macaca_nemestrina
ENSELUG00000005696	sall4	100	45.021	ENSMLEG00000030467	SALL4	100	45.501	Mandrillus_leucophaeus
ENSELUG00000005696	sall4	100	66.849	ENSMAMG00000005223	sall4	100	66.725	Mastacembelus_armatus
ENSELUG00000005696	sall4	100	64.450	ENSMZEG00005023418	sall4	100	64.273	Maylandia_zebra
ENSELUG00000005696	sall4	74	63.462	ENSMGAG00000009344	SALL4	96	63.462	Meleagris_gallopavo
ENSELUG00000005696	sall4	100	42.941	ENSMAUG00000015814	Sall4	100	74.699	Mesocricetus_auratus
ENSELUG00000005696	sall4	100	44.416	ENSMICG00000000027	SALL4	86	67.308	Microcebus_murinus
ENSELUG00000005696	sall4	100	43.170	ENSMOCG00000018245	Sall4	100	82.192	Microtus_ochrogaster
ENSELUG00000005696	sall4	100	65.562	ENSMMOG00000014929	sall4	100	65.750	Mola_mola
ENSELUG00000005696	sall4	99	49.139	ENSMODG00000016387	SALL4	97	48.038	Monodelphis_domestica
ENSELUG00000005696	sall4	100	67.035	ENSMALG00000018709	sall4	100	67.127	Monopterus_albus
ENSELUG00000005696	sall4	100	42.233	MGP_CAROLIEiJ_G0024723	Sall4	100	84.722	Mus_caroli
ENSELUG00000005696	sall4	100	42.988	ENSMUSG00000027547	Sall4	100	84.722	Mus_musculus
ENSELUG00000005696	sall4	100	41.839	MGP_PahariEiJ_G0026164	Sall4	100	84.722	Mus_pahari
ENSELUG00000005696	sall4	100	42.905	MGP_SPRETEiJ_G0025643	Sall4	100	84.722	Mus_spretus
ENSELUG00000005696	sall4	100	43.339	ENSMPUG00000017543	SALL4	96	43.423	Mustela_putorius_furo
ENSELUG00000005696	sall4	99	32.007	ENSMLUG00000028073	-	99	31.771	Myotis_lucifugus
ENSELUG00000005696	sall4	100	41.223	ENSMLUG00000008405	-	100	40.961	Myotis_lucifugus
ENSELUG00000005696	sall4	99	43.638	ENSMLUG00000007060	-	99	43.606	Myotis_lucifugus
ENSELUG00000005696	sall4	100	43.149	ENSNGAG00000017833	Sall4	84	67.308	Nannospalax_galili
ENSELUG00000005696	sall4	100	64.476	ENSNBRG00000001829	sall4	100	64.476	Neolamprologus_brichardi
ENSELUG00000005696	sall4	100	44.672	ENSNLEG00000007013	SALL4	100	45.200	Nomascus_leucogenys
ENSELUG00000005696	sall4	87	63.462	ENSMEUG00000005793	-	99	63.462	Notamacropus_eugenii
ENSELUG00000005696	sall4	100	43.787	ENSOPRG00000011640	SALL4	100	43.787	Ochotona_princeps
ENSELUG00000005696	sall4	100	64.862	ENSONIG00000016557	sall4	100	65.160	Oreochromis_niloticus
ENSELUG00000005696	sall4	100	50.684	ENSOANG00000008667	SALL4	97	51.062	Ornithorhynchus_anatinus
ENSELUG00000005696	sall4	99	44.635	ENSOCUG00000011797	SALL4	98	44.753	Oryctolagus_cuniculus
ENSELUG00000005696	sall4	100	64.286	ENSORLG00000016130	sall4	100	64.393	Oryzias_latipes
ENSELUG00000005696	sall4	100	64.194	ENSORLG00020007339	sall4	100	64.393	Oryzias_latipes_hni
ENSELUG00000005696	sall4	100	64.011	ENSORLG00015002265	sall4	100	64.128	Oryzias_latipes_hsok
ENSELUG00000005696	sall4	100	64.436	ENSOMEG00000017344	sall4	100	64.539	Oryzias_melastigma
ENSELUG00000005696	sall4	99	45.040	ENSOGAG00000013799	SALL4	99	45.040	Otolemur_garnettii
ENSELUG00000005696	sall4	100	40.051	ENSOARG00000014570	SALL4	100	40.641	Ovis_aries
ENSELUG00000005696	sall4	100	44.928	ENSPPAG00000038064	SALL4	86	67.308	Pan_paniscus
ENSELUG00000005696	sall4	100	43.548	ENSPPRG00000008677	SALL4	88	67.308	Panthera_pardus
ENSELUG00000005696	sall4	100	44.303	ENSPTRG00000013631	SALL4	86	67.308	Pan_troglodytes
ENSELUG00000005696	sall4	90	46.774	ENSPANG00000021792	SALL4	86	67.308	Papio_anubis
ENSELUG00000005696	sall4	100	65.867	ENSPKIG00000007074	sall4	100	66.133	Paramormyrops_kingsleyae
ENSELUG00000005696	sall4	99	51.899	ENSPSIG00000009066	SALL4	99	52.778	Pelodiscus_sinensis
ENSELUG00000005696	sall4	100	57.524	ENSPMGG00000022551	sall4	100	57.970	Periophthalmus_magnuspinnatus
ENSELUG00000005696	sall4	100	42.427	ENSPEMG00000022706	Sall4	100	84.722	Peromyscus_maniculatus_bairdii
ENSELUG00000005696	sall4	99	49.415	ENSPCIG00000022838	SALL4	97	48.390	Phascolarctos_cinereus
ENSELUG00000005696	sall4	100	65.106	ENSPFOG00000001442	sall4	100	64.867	Poecilia_formosa
ENSELUG00000005696	sall4	100	65.014	ENSPLAG00000008760	sall4	100	64.779	Poecilia_latipinna
ENSELUG00000005696	sall4	100	65.106	ENSPMEG00000008497	sall4	100	64.779	Poecilia_mexicana
ENSELUG00000005696	sall4	100	65.138	ENSPREG00000021140	sall4	100	64.810	Poecilia_reticulata
ENSELUG00000005696	sall4	100	44.605	ENSPPYG00000011138	SALL4	100	44.690	Pongo_abelii
ENSELUG00000005696	sall4	100	41.212	ENSPCAG00000004726	SALL4	99	41.858	Procavia_capensis
ENSELUG00000005696	sall4	100	43.846	ENSPCOG00000016321	SALL4	82	67.308	Propithecus_coquereli
ENSELUG00000005696	sall4	94	44.392	ENSPVAG00000002075	SALL4	94	43.599	Pteropus_vampyrus
ENSELUG00000005696	sall4	100	64.628	ENSPNYG00000021738	sall4	100	64.450	Pundamilia_nyererei
ENSELUG00000005696	sall4	99	68.121	ENSPNAG00000020929	sall4	99	68.121	Pygocentrus_nattereri
ENSELUG00000005696	sall4	100	42.703	ENSRNOG00000050035	Sall4	83	65.385	Rattus_norvegicus
ENSELUG00000005696	sall4	100	44.549	ENSRBIG00000039876	SALL4	100	44.992	Rhinopithecus_bieti
ENSELUG00000005696	sall4	100	44.634	ENSRROG00000036585	SALL4	100	45.076	Rhinopithecus_roxellana
ENSELUG00000005696	sall4	100	43.533	ENSSBOG00000030011	SALL4	85	67.308	Saimiri_boliviensis_boliviensis
ENSELUG00000005696	sall4	97	65.385	ENSSHAG00000018013	SALL4	90	65.385	Sarcophilus_harrisii
ENSELUG00000005696	sall4	100	65.501	ENSSFOG00015021075	sall4	100	65.160	Scleropages_formosus
ENSELUG00000005696	sall4	100	66.298	ENSSMAG00000019218	sall4	99	66.282	Scophthalmus_maximus
ENSELUG00000005696	sall4	100	67.819	ENSSDUG00000004657	sall4	100	67.908	Seriola_dumerili
ENSELUG00000005696	sall4	100	67.553	ENSSLDG00000004973	sall4	100	67.642	Seriola_lalandi_dorsalis
ENSELUG00000005696	sall4	100	66.667	ENSSPAG00000001978	sall4	100	66.933	Stegastes_partitus
ENSELUG00000005696	sall4	100	43.504	ENSSSCG00000007479	SALL4	100	43.504	Sus_scrofa
ENSELUG00000005696	sall4	100	65.778	ENSTRUG00000007410	sall4	100	65.778	Takifugu_rubripes
ENSELUG00000005696	sall4	100	64.299	ENSTNIG00000012460	sall4	100	64.444	Tetraodon_nigroviridis
ENSELUG00000005696	sall4	99	42.457	ENSTTRG00000007753	SALL4	99	42.167	Tursiops_truncatus
ENSELUG00000005696	sall4	100	43.878	ENSUAMG00000010113	SALL4	100	44.048	Ursus_americanus
ENSELUG00000005696	sall4	99	44.385	ENSUMAG00000024274	SALL4	98	44.188	Ursus_maritimus
ENSELUG00000005696	sall4	100	48.656	ENSXETG00000012326	sall4	100	48.446	Xenopus_tropicalis
ENSELUG00000005696	sall4	100	58.459	ENSXCOG00000015467	sall4	100	58.584	Xiphophorus_couchianus
ENSELUG00000005696	sall4	100	58.280	ENSXMAG00000012692	sall4	100	58.201	Xiphophorus_maculatus