EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000005731 (Gene tree)
Gene ID: 105031272
Gene Symbol: nsrp1
Alias: ccdc55|fc14d05|wu:fc14d05|zgc:152777
Full Name: nuclear speckle splicing regulatory protein 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 6461 bases
Position: chrLG07:39739927-39746387
Accession: 105031272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000028956	DUF2040	PF09745.9	1.2e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000012076	-	3613	XM_013140741	ENSELUP00000028956	538 (aa)	XP_012996195	-

Gene Model

Click here to download ENSELUG00000005731's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005731's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005731	nsrp1	100	39.724	ENSG00000126653	NSRP1	100	60.938	Homo_sapiens
ENSELUG00000005731	nsrp1	51	71.429	ENSACIG00000014008	nsrp1	97	71.429	Amphilophus_citrinellus
ENSELUG00000005731	nsrp1	56	76.316	ENSATEG00000006815	nsrp1	100	70.732	Anabas_testudineus
ENSELUG00000005731	nsrp1	57	66.456	ENSDARG00000015221	nsrp1	55	67.832	Danio_rerio
ENSELUG00000005731	nsrp1	100	55.311	ENSFHEG00000004525	nsrp1	60	70.877	Fundulus_heteroclitus
ENSELUG00000005731	nsrp1	67	61.875	ENSGACG00000020516	nsrp1	59	62.013	Gasterosteus_aculeatus
ENSELUG00000005731	nsrp1	71	60.436	ENSHCOG00000009930	nsrp1	87	65.185	Hippocampus_comes
ENSELUG00000005731	nsrp1	78	73.684	ENSIPUG00000019291	nsrp1	70	73.684	Ictalurus_punctatus
ENSELUG00000005731	nsrp1	52	71.831	ENSKMAG00000019403	nsrp1	60	71.678	Kryptolebias_marmoratus
ENSELUG00000005731	nsrp1	76	72.500	ENSLBEG00000027763	nsrp1	90	69.820	Labrus_bergylta
ENSELUG00000005731	nsrp1	91	43.909	ENSLOCG00000006654	nsrp1	54	84.211	Lepisosteus_oculatus
ENSELUG00000005731	nsrp1	68	65.229	ENSMAMG00000020195	nsrp1	98	70.107	Mastacembelus_armatus
ENSELUG00000005731	nsrp1	66	44.192	ENSMUSG00000037958	Nsrp1	96	61.333	Mus_musculus
ENSELUG00000005731	nsrp1	57	71.795	ENSONIG00000005565	nsrp1	99	65.176	Oreochromis_niloticus
ENSELUG00000005731	nsrp1	57	80.000	ENSPKIG00000000088	nsrp1	70	61.765	Paramormyrops_kingsleyae
ENSELUG00000005731	nsrp1	78	68.750	ENSPMGG00000021712	nsrp1	57	69.708	Periophthalmus_magnuspinnatus
ENSELUG00000005731	nsrp1	52	70.423	ENSPFOG00000011548	nsrp1	60	70.526	Poecilia_formosa
ENSELUG00000005731	nsrp1	61	62.426	ENSPNAG00000013616	nsrp1	58	67.986	Pygocentrus_nattereri
ENSELUG00000005731	nsrp1	55	61.364	ENSTNIG00000016161	nsrp1	98	63.140	Tetraodon_nigroviridis