EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000005794 (Gene tree)
Gene ID: 105018315
Gene Symbol: edc3
Alias: im:7151288|lsm16|wu:fb82d07|yjdc|zgc:112006
Full Name: enhancer of mRNA-decapping protein 3
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 10034 bases
Position: chrLG19:14734650-14744683
Accession: 105018315
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000029023	FDF	PF09532.10	1.8e-06	1	1
ENSELUP00000029023	LSM14	PF12701.7	9.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000011958	-	4201	XM_010883640	ENSELUP00000029023	479 (aa)	XP_010881942	UPI0005762C97

Gene Model

Click here to download ENSELUG00000005794's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005794's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000005794	edc3	100	69.647	ENSELUG00000007607	EDC3	100	69.647

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005794	edc3	100	66.082	ENSG00000179151	EDC3	100	81.481	Homo_sapiens
ENSELUG00000005794	edc3	100	58.384	ENSAPOG00000008655	EDC3	100	58.384	Acanthochromis_polyacanthus
ENSELUG00000005794	edc3	100	82.546	ENSAPOG00000010791	edc3	100	82.546	Acanthochromis_polyacanthus
ENSELUG00000005794	edc3	100	65.497	ENSAMEG00000008963	EDC3	100	65.497	Ailuropoda_melanoleuca
ENSELUG00000005794	edc3	100	81.405	ENSACIG00000017751	edc3	100	81.405	Amphilophus_citrinellus
ENSELUG00000005794	edc3	99	63.710	ENSACIG00000005330	EDC3	99	64.113	Amphilophus_citrinellus
ENSELUG00000005794	edc3	100	63.693	ENSAOCG00000009103	-	100	63.693	Amphiprion_ocellaris
ENSELUG00000005794	edc3	100	83.058	ENSAOCG00000005431	edc3	100	83.058	Amphiprion_ocellaris
ENSELUG00000005794	edc3	100	83.058	ENSAPEG00000000968	edc3	100	83.058	Amphiprion_percula
ENSELUG00000005794	edc3	100	64.523	ENSAPEG00000007841	EDC3	100	64.523	Amphiprion_percula
ENSELUG00000005794	edc3	100	65.979	ENSATEG00000004205	-	100	65.979	Anabas_testudineus
ENSELUG00000005794	edc3	100	82.645	ENSATEG00000015505	edc3	100	82.645	Anabas_testudineus
ENSELUG00000005794	edc3	89	64.629	ENSAPLG00000008957	EDC3	100	64.629	Anas_platyrhynchos
ENSELUG00000005794	edc3	77	65.000	ENSACAG00000000460	-	100	65.000	Anolis_carolinensis
ENSELUG00000005794	edc3	100	66.082	ENSANAG00000024078	EDC3	100	66.082	Aotus_nancymaae
ENSELUG00000005794	edc3	100	64.124	ENSACLG00000018776	-	100	64.124	Astatotilapia_calliptera
ENSELUG00000005794	edc3	100	80.579	ENSACLG00000007232	edc3	100	80.579	Astatotilapia_calliptera
ENSELUG00000005794	edc3	100	75.542	ENSAMXG00000001589	edc3	100	75.542	Astyanax_mexicanus
ENSELUG00000005794	edc3	100	65.497	ENSBTAG00000007308	EDC3	100	65.497	Bos_taurus
ENSELUG00000005794	edc3	100	66.082	ENSCJAG00000017681	EDC3	100	66.082	Callithrix_jacchus
ENSELUG00000005794	edc3	100	65.692	ENSCAFG00000017935	EDC3	100	65.692	Canis_familiaris
ENSELUG00000005794	edc3	100	65.692	ENSCAFG00020003909	EDC3	100	65.692	Canis_lupus_dingo
ENSELUG00000005794	edc3	100	65.497	ENSCHIG00000023658	EDC3	100	65.497	Capra_hircus
ENSELUG00000005794	edc3	100	66.277	ENSTSYG00000004822	EDC3	100	66.277	Carlito_syrichta
ENSELUG00000005794	edc3	100	65.887	ENSCPOG00000015595	EDC3	100	65.887	Cavia_porcellus
ENSELUG00000005794	edc3	100	65.887	ENSCCAG00000021663	EDC3	100	65.887	Cebus_capucinus
ENSELUG00000005794	edc3	100	65.887	ENSCATG00000037511	EDC3	100	65.887	Cercocebus_atys
ENSELUG00000005794	edc3	100	65.692	ENSCLAG00000005700	EDC3	100	65.692	Chinchilla_lanigera
ENSELUG00000005794	edc3	100	65.887	ENSCSAG00000014239	EDC3	100	65.887	Chlorocebus_sabaeus
ENSELUG00000005794	edc3	100	66.862	ENSCPBG00000024239	EDC3	100	66.862	Chrysemys_picta_bellii
ENSELUG00000005794	edc3	100	37.500	ENSCING00000022142	-	99	36.914	Ciona_intestinalis
ENSELUG00000005794	edc3	100	65.887	ENSCANG00000028699	EDC3	100	65.887	Colobus_angolensis_palliatus
ENSELUG00000005794	edc3	100	65.692	ENSCGRG00001013874	Edc3	100	65.692	Cricetulus_griseus_chok1gshd
ENSELUG00000005794	edc3	100	65.692	ENSCGRG00000011885	Edc3	100	65.692	Cricetulus_griseus_crigri
ENSELUG00000005794	edc3	99	81.159	ENSCSEG00000012996	edc3	99	81.159	Cynoglossus_semilaevis
ENSELUG00000005794	edc3	100	79.752	ENSCVAG00000008023	edc3	100	79.752	Cyprinodon_variegatus
ENSELUG00000005794	edc3	99	71.992	ENSDARG00000051931	edc3	99	71.992	Danio_rerio
ENSELUG00000005794	edc3	100	59.195	ENSDNOG00000030661	EDC3	100	59.195	Dasypus_novemcinctus
ENSELUG00000005794	edc3	69	83.333	ENSETEG00000002398	-	64	83.333	Echinops_telfairi
ENSELUG00000005794	edc3	100	65.497	ENSEASG00005005071	EDC3	100	65.497	Equus_asinus_asinus
ENSELUG00000005794	edc3	100	65.497	ENSECAG00000017994	EDC3	100	65.497	Equus_caballus
ENSELUG00000005794	edc3	100	65.497	ENSFCAG00000002014	EDC3	100	65.497	Felis_catus
ENSELUG00000005794	edc3	98	65.538	ENSFALG00000004543	EDC3	96	65.538	Ficedula_albicollis
ENSELUG00000005794	edc3	100	65.692	ENSFDAG00000012582	EDC3	100	65.692	Fukomys_damarensis
ENSELUG00000005794	edc3	100	80.165	ENSFHEG00000009375	edc3	100	80.165	Fundulus_heteroclitus
ENSELUG00000005794	edc3	100	81.818	ENSGMOG00000002715	edc3	100	81.818	Gadus_morhua
ENSELUG00000005794	edc3	100	66.536	ENSGALG00000040181	EDC3	100	66.536	Gallus_gallus
ENSELUG00000005794	edc3	100	79.752	ENSGAFG00000014433	edc3	100	80.041	Gambusia_affinis
ENSELUG00000005794	edc3	99	60.392	ENSGACG00000014671	EDC3	99	60.588	Gasterosteus_aculeatus
ENSELUG00000005794	edc3	100	80.992	ENSGACG00000009783	edc3	100	80.992	Gasterosteus_aculeatus
ENSELUG00000005794	edc3	100	66.928	ENSGAGG00000023477	EDC3	100	66.928	Gopherus_agassizii
ENSELUG00000005794	edc3	100	66.082	ENSGGOG00000003552	EDC3	100	66.082	Gorilla_gorilla
ENSELUG00000005794	edc3	100	64.124	ENSHBUG00000020817	EDC3	100	64.124	Haplochromis_burtoni
ENSELUG00000005794	edc3	100	80.579	ENSHBUG00000003635	edc3	100	80.579	Haplochromis_burtoni
ENSELUG00000005794	edc3	100	78.719	ENSHCOG00000016834	edc3	100	78.926	Hippocampus_comes
ENSELUG00000005794	edc3	99	73.705	ENSIPUG00000005695	edc3	100	73.705	Ictalurus_punctatus
ENSELUG00000005794	edc3	100	66.277	ENSSTOG00000013936	EDC3	100	66.277	Ictidomys_tridecemlineatus
ENSELUG00000005794	edc3	100	65.887	ENSJJAG00000008074	Edc3	100	65.887	Jaculus_jaculus
ENSELUG00000005794	edc3	100	62.781	ENSKMAG00000001987	EDC3	100	62.781	Kryptolebias_marmoratus
ENSELUG00000005794	edc3	100	81.031	ENSKMAG00000001243	edc3	100	81.237	Kryptolebias_marmoratus
ENSELUG00000005794	edc3	100	80.493	ENSLBEG00000013435	edc3	99	80.493	Labrus_bergylta
ENSELUG00000005794	edc3	100	63.525	ENSLBEG00000017984	EDC3	100	63.525	Labrus_bergylta
ENSELUG00000005794	edc3	100	66.859	ENSLACG00000014149	EDC3	100	66.859	Latimeria_chalumnae
ENSELUG00000005794	edc3	99	69.679	ENSLOCG00000014625	edc3	99	69.679	Lepisosteus_oculatus
ENSELUG00000005794	edc3	100	66.016	ENSLAFG00000002992	EDC3	100	66.016	Loxodonta_africana
ENSELUG00000005794	edc3	100	66.082	ENSMFAG00000043074	EDC3	100	66.082	Macaca_fascicularis
ENSELUG00000005794	edc3	100	66.082	ENSMMUG00000011071	EDC3	100	66.082	Macaca_mulatta
ENSELUG00000005794	edc3	100	66.082	ENSMNEG00000035316	EDC3	100	66.082	Macaca_nemestrina
ENSELUG00000005794	edc3	100	65.887	ENSMLEG00000030372	EDC3	100	65.887	Mandrillus_leucophaeus
ENSELUG00000005794	edc3	100	82.231	ENSMAMG00000000505	edc3	100	82.231	Mastacembelus_armatus
ENSELUG00000005794	edc3	99	63.333	ENSMAMG00000005423	-	99	63.333	Mastacembelus_armatus
ENSELUG00000005794	edc3	100	63.934	ENSMZEG00005005654	EDC3	100	63.934	Maylandia_zebra
ENSELUG00000005794	edc3	100	80.579	ENSMZEG00005004892	edc3	100	80.579	Maylandia_zebra
ENSELUG00000005794	edc3	100	66.536	ENSMGAG00000002617	EDC3	100	66.536	Meleagris_gallopavo
ENSELUG00000005794	edc3	100	66.277	ENSMICG00000043190	EDC3	100	66.277	Microcebus_murinus
ENSELUG00000005794	edc3	100	65.302	ENSMOCG00000016205	Edc3	100	65.302	Microtus_ochrogaster
ENSELUG00000005794	edc3	99	81.781	ENSMMOG00000012278	edc3	99	81.988	Mola_mola
ENSELUG00000005794	edc3	100	66.472	ENSMODG00000009442	EDC3	100	66.472	Monodelphis_domestica
ENSELUG00000005794	edc3	100	81.405	ENSMALG00000008658	edc3	100	81.405	Monopterus_albus
ENSELUG00000005794	edc3	100	65.302	MGP_CAROLIEiJ_G0032280	Edc3	100	78.462	Mus_caroli
ENSELUG00000005794	edc3	100	65.497	ENSMUSG00000038957	Edc3	100	78.462	Mus_musculus
ENSELUG00000005794	edc3	100	65.497	MGP_PahariEiJ_G0015146	Edc3	100	78.462	Mus_pahari
ENSELUG00000005794	edc3	100	65.497	MGP_SPRETEiJ_G0033420	Edc3	100	78.462	Mus_spretus
ENSELUG00000005794	edc3	100	65.497	ENSMPUG00000017293	EDC3	100	65.497	Mustela_putorius_furo
ENSELUG00000005794	edc3	100	65.825	ENSMLUG00000016382	EDC3	100	65.825	Myotis_lucifugus
ENSELUG00000005794	edc3	100	64.717	ENSNGAG00000010923	Edc3	100	64.717	Nannospalax_galili
ENSELUG00000005794	edc3	100	64.198	ENSNBRG00000007881	EDC3	100	64.198	Neolamprologus_brichardi
ENSELUG00000005794	edc3	100	80.785	ENSNBRG00000002434	edc3	100	80.785	Neolamprologus_brichardi
ENSELUG00000005794	edc3	100	56.920	ENSNLEG00000014577	EDC3	100	56.920	Nomascus_leucogenys
ENSELUG00000005794	edc3	100	66.145	ENSMEUG00000009077	EDC3	100	66.145	Notamacropus_eugenii
ENSELUG00000005794	edc3	85	83.333	ENSOPRG00000009540	-	79	83.333	Ochotona_princeps
ENSELUG00000005794	edc3	100	60.311	ENSONIG00000002932	-	100	60.311	Oreochromis_niloticus
ENSELUG00000005794	edc3	100	80.785	ENSONIG00000008434	edc3	100	80.785	Oreochromis_niloticus
ENSELUG00000005794	edc3	77	62.344	ENSOCUG00000017740	EDC3	86	62.843	Oryctolagus_cuniculus
ENSELUG00000005794	edc3	100	80.041	ENSORLG00000004883	edc3	100	80.041	Oryzias_latipes
ENSELUG00000005794	edc3	100	62.083	ENSORLG00000014399	-	98	62.083	Oryzias_latipes
ENSELUG00000005794	edc3	100	62.083	ENSORLG00020019446	-	100	62.083	Oryzias_latipes_hni
ENSELUG00000005794	edc3	100	79.588	ENSORLG00020012262	edc3	100	79.588	Oryzias_latipes_hni
ENSELUG00000005794	edc3	100	62.500	ENSORLG00015017635	-	96	62.500	Oryzias_latipes_hsok
ENSELUG00000005794	edc3	100	80.041	ENSORLG00015005634	edc3	100	80.041	Oryzias_latipes_hsok
ENSELUG00000005794	edc3	100	80.165	ENSOMEG00000014026	edc3	100	80.165	Oryzias_melastigma
ENSELUG00000005794	edc3	100	62.500	ENSOMEG00000017354	EDC3	100	62.500	Oryzias_melastigma
ENSELUG00000005794	edc3	100	65.107	ENSOGAG00000014441	EDC3	100	65.887	Otolemur_garnettii
ENSELUG00000005794	edc3	100	64.786	ENSOARG00000003476	EDC3	100	65.175	Ovis_aries
ENSELUG00000005794	edc3	100	66.082	ENSPPAG00000040143	EDC3	100	66.082	Pan_paniscus
ENSELUG00000005794	edc3	100	65.497	ENSPPRG00000006257	EDC3	100	65.497	Panthera_pardus
ENSELUG00000005794	edc3	100	65.497	ENSPTIG00000017424	EDC3	100	65.497	Panthera_tigris_altaica
ENSELUG00000005794	edc3	100	66.082	ENSPTRG00000007279	EDC3	100	66.082	Pan_troglodytes
ENSELUG00000005794	edc3	100	65.887	ENSPANG00000015997	EDC3	100	65.887	Papio_anubis
ENSELUG00000005794	edc3	100	72.984	ENSPKIG00000019810	EDC3	100	72.984	Paramormyrops_kingsleyae
ENSELUG00000005794	edc3	100	71.006	ENSPKIG00000004416	edc3	100	71.006	Paramormyrops_kingsleyae
ENSELUG00000005794	edc3	100	62.183	ENSPSIG00000008474	EDC3	100	63.548	Pelodiscus_sinensis
ENSELUG00000005794	edc3	100	81.535	ENSPMGG00000007223	edc3	100	81.535	Periophthalmus_magnuspinnatus
ENSELUG00000005794	edc3	100	65.887	ENSPEMG00000015260	Edc3	100	65.887	Peromyscus_maniculatus_bairdii
ENSELUG00000005794	edc3	100	65.949	ENSPCIG00000006276	EDC3	70	66.078	Phascolarctos_cinereus
ENSELUG00000005794	edc3	100	80.579	ENSPFOG00000012204	edc3	100	80.579	Poecilia_formosa
ENSELUG00000005794	edc3	100	80.579	ENSPLAG00000014420	edc3	100	80.579	Poecilia_latipinna
ENSELUG00000005794	edc3	100	80.579	ENSPMEG00000023289	edc3	100	80.579	Poecilia_mexicana
ENSELUG00000005794	edc3	100	80.579	ENSPREG00000016022	edc3	100	80.579	Poecilia_reticulata
ENSELUG00000005794	edc3	100	64.912	ENSPPYG00000006642	EDC3	100	64.912	Pongo_abelii
ENSELUG00000005794	edc3	94	81.481	ENSPCAG00000002802	EDC3	88	81.481	Procavia_capensis
ENSELUG00000005794	edc3	100	65.887	ENSPCOG00000013364	EDC3	100	65.887	Propithecus_coquereli
ENSELUG00000005794	edc3	100	65.692	ENSPVAG00000014733	EDC3	100	65.692	Pteropus_vampyrus
ENSELUG00000005794	edc3	100	80.579	ENSPNYG00000021797	edc3	100	80.579	Pundamilia_nyererei
ENSELUG00000005794	edc3	100	64.124	ENSPNYG00000009669	EDC3	100	64.124	Pundamilia_nyererei
ENSELUG00000005794	edc3	100	75.542	ENSPNAG00000019657	edc3	100	75.542	Pygocentrus_nattereri
ENSELUG00000005794	edc3	99	65.490	ENSRNOG00000019579	Edc3	99	65.686	Rattus_norvegicus
ENSELUG00000005794	edc3	100	65.887	ENSRBIG00000019488	EDC3	100	65.887	Rhinopithecus_bieti
ENSELUG00000005794	edc3	100	65.887	ENSRROG00000034959	EDC3	100	65.887	Rhinopithecus_roxellana
ENSELUG00000005794	edc3	100	65.887	ENSSBOG00000004896	EDC3	100	65.887	Saimiri_boliviensis_boliviensis
ENSELUG00000005794	edc3	96	65.447	ENSSHAG00000015075	EDC3	95	65.447	Sarcophilus_harrisii
ENSELUG00000005794	edc3	100	75.397	ENSSFOG00015016939	edc3	100	75.794	Scleropages_formosus
ENSELUG00000005794	edc3	100	70.722	ENSSFOG00015002439	edc3	100	70.928	Scleropages_formosus
ENSELUG00000005794	edc3	100	81.198	ENSSMAG00000010695	edc3	100	81.198	Scophthalmus_maximus
ENSELUG00000005794	edc3	99	65.000	ENSSMAG00000010176	-	99	65.000	Scophthalmus_maximus
ENSELUG00000005794	edc3	100	82.851	ENSSDUG00000021844	edc3	100	83.058	Seriola_dumerili
ENSELUG00000005794	edc3	100	66.805	ENSSDUG00000007671	EDC3	100	66.805	Seriola_dumerili
ENSELUG00000005794	edc3	100	82.645	ENSSLDG00000022046	edc3	100	82.851	Seriola_lalandi_dorsalis
ENSELUG00000005794	edc3	78	77.419	ENSSARG00000003907	EDC3	80	77.419	Sorex_araneus
ENSELUG00000005794	edc3	100	64.912	ENSSPUG00000008232	EDC3	100	64.912	Sphenodon_punctatus
ENSELUG00000005794	edc3	100	82.851	ENSSPAG00000010009	edc3	100	82.851	Stegastes_partitus
ENSELUG00000005794	edc3	100	64.536	ENSSPAG00000020327	EDC3	100	64.536	Stegastes_partitus
ENSELUG00000005794	edc3	100	68.116	ENSSSCG00000001903	EDC3	100	68.323	Sus_scrofa
ENSELUG00000005794	edc3	100	66.145	ENSTGUG00000004007	EDC3	100	66.145	Taeniopygia_guttata
ENSELUG00000005794	edc3	100	80.417	ENSTRUG00000017078	edc3	100	80.417	Takifugu_rubripes
ENSELUG00000005794	edc3	100	78.807	ENSTNIG00000016047	edc3	100	78.807	Tetraodon_nigroviridis
ENSELUG00000005794	edc3	100	66.211	ENSTTRG00000007990	EDC3	100	66.211	Tursiops_truncatus
ENSELUG00000005794	edc3	100	65.497	ENSUAMG00000026710	-	100	65.497	Ursus_americanus
ENSELUG00000005794	edc3	100	65.497	ENSUMAG00000005006	EDC3	96	65.497	Ursus_maritimus
ENSELUG00000005794	edc3	85	72.222	ENSVPAG00000003499	-	79	72.222	Vicugna_pacos
ENSELUG00000005794	edc3	100	65.692	ENSVVUG00000018601	EDC3	100	65.692	Vulpes_vulpes
ENSELUG00000005794	edc3	73	71.307	ENSXETG00000010622	edc3	99	72.443	Xenopus_tropicalis
ENSELUG00000005794	edc3	100	80.372	ENSXMAG00000007377	edc3	100	80.372	Xiphophorus_maculatus