EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000005815 (Gene tree)
Gene ID: 105022321
Gene Symbol: POLR2E (1 of many)
Alias: -
Full Name: DNA-directed RNA polymerases I%2C II%2C and III subunit RPABC1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 4310 bases
Position: chrLG03:14780050-14784359
Accession: 105022321
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000004598	RNA_pol_Rpb5_N	PF03871.14	8.6e-35	1	1
ENSELUP00000028974	RNA_pol_Rpb5_N	PF03871.14	1.1e-34	1	1
ENSELUP00000028974	RNA_pol_Rpb5_C	PF01191.19	8.8e-34	1	1
ENSELUP00000004598	RNA_pol_Rpb5_C	PF01191.19	1.2e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000012081	POLR2E (1 of many)-202	552	-	ENSELUP00000004598	183 (aa)	-	-
ENSELUT00000012017	POLR2E (1 of many)-201	1871	-	ENSELUP00000028974	210 (aa)	-	UPI000181FD9C

Gene Model

Click here to download ENSELUG00000005815's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03020	RNA polymerase	KEGG
els04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005815's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000005815	POLR2E	100	99.048	ENSELUG00000020646	polr2e	100	99.048

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005815	POLR2E	100	93.810	ENSG00000099817	POLR2E	100	93.810	Homo_sapiens
ENSELUG00000005815	POLR2E	100	98.095	ENSAPOG00000002935	polr2eb	100	98.095	Acanthochromis_polyacanthus
ENSELUG00000005815	POLR2E	100	94.286	ENSAMEG00000003159	POLR2E	100	94.286	Ailuropoda_melanoleuca
ENSELUG00000005815	POLR2E	100	97.268	ENSACIG00000024371	polr2eb	100	97.268	Amphilophus_citrinellus
ENSELUG00000005815	POLR2E	100	98.095	ENSAOCG00000018166	polr2eb	100	98.095	Amphiprion_ocellaris
ENSELUG00000005815	POLR2E	100	98.095	ENSAPEG00000009000	polr2eb	100	98.095	Amphiprion_percula
ENSELUG00000005815	POLR2E	100	98.095	ENSATEG00000023760	polr2eb	100	98.095	Anabas_testudineus
ENSELUG00000005815	POLR2E	100	94.286	ENSANAG00000038488	POLR2E	100	94.286	Aotus_nancymaae
ENSELUG00000005815	POLR2E	100	97.619	ENSACLG00000005254	polr2eb	100	97.619	Astatotilapia_calliptera
ENSELUG00000005815	POLR2E	100	97.619	ENSAMXG00000018915	POLR2E	100	97.619	Astyanax_mexicanus
ENSELUG00000005815	POLR2E	100	94.286	ENSBTAG00000020776	POLR2E	100	94.286	Bos_taurus
ENSELUG00000005815	POLR2E	99	77.885	WBGene00019246	rpb-5	99	77.885	Caenorhabditis_elegans
ENSELUG00000005815	POLR2E	67	88.571	ENSCJAG00000007666	-	77	88.571	Callithrix_jacchus
ENSELUG00000005815	POLR2E	100	91.429	ENSCAFG00000019546	POLR2E	100	91.429	Canis_familiaris
ENSELUG00000005815	POLR2E	100	94.286	ENSCAFG00020017111	POLR2E	100	94.286	Canis_lupus_dingo
ENSELUG00000005815	POLR2E	100	94.286	ENSCHIG00000014151	POLR2E	100	94.286	Capra_hircus
ENSELUG00000005815	POLR2E	100	79.048	ENSTSYG00000026377	POLR2E	100	79.048	Carlito_syrichta
ENSELUG00000005815	POLR2E	91	93.750	ENSCAPG00000010843	POLR2E	93	93.750	Cavia_aperea
ENSELUG00000005815	POLR2E	100	94.286	ENSCPOG00000001542	POLR2E	100	94.286	Cavia_porcellus
ENSELUG00000005815	POLR2E	100	94.286	ENSCCAG00000025658	POLR2E	100	94.286	Cebus_capucinus
ENSELUG00000005815	POLR2E	100	94.286	ENSCATG00000008926	POLR2E	100	94.286	Cercocebus_atys
ENSELUG00000005815	POLR2E	98	72.195	ENSCLAG00000009238	-	100	72.195	Chinchilla_lanigera
ENSELUG00000005815	POLR2E	100	94.286	ENSCLAG00000014874	-	100	94.286	Chinchilla_lanigera
ENSELUG00000005815	POLR2E	100	94.286	ENSCSAG00000012336	POLR2E	100	94.286	Chlorocebus_sabaeus
ENSELUG00000005815	POLR2E	100	94.762	ENSCPBG00000009702	POLR2E	100	94.762	Chrysemys_picta_bellii
ENSELUG00000005815	POLR2E	100	86.190	ENSCING00000024933	-	99	86.190	Ciona_intestinalis
ENSELUG00000005815	POLR2E	100	94.286	ENSCANG00000025560	POLR2E	100	94.286	Colobus_angolensis_palliatus
ENSELUG00000005815	POLR2E	100	94.286	ENSCGRG00001022927	Polr2e	100	94.286	Cricetulus_griseus_chok1gshd
ENSELUG00000005815	POLR2E	100	90.233	ENSCGRG00000016441	Polr2e	100	90.233	Cricetulus_griseus_crigri
ENSELUG00000005815	POLR2E	100	96.190	ENSCSEG00000007107	polr2eb	100	95.628	Cynoglossus_semilaevis
ENSELUG00000005815	POLR2E	100	98.095	ENSCVAG00000019940	polr2eb	100	98.095	Cyprinodon_variegatus
ENSELUG00000005815	POLR2E	100	97.143	ENSDARG00000026183	polr2eb	100	97.143	Danio_rerio
ENSELUG00000005815	POLR2E	90	93.684	ENSDNOG00000044994	POLR2E	84	93.684	Dasypus_novemcinctus
ENSELUG00000005815	POLR2E	100	94.286	ENSDORG00000001154	Polr2e	100	94.286	Dipodomys_ordii
ENSELUG00000005815	POLR2E	99	85.167	FBgn0033571	Rpb5	99	85.167	Drosophila_melanogaster
ENSELUG00000005815	POLR2E	75	90.446	ENSEBUG00000010159	-	76	90.446	Eptatretus_burgeri
ENSELUG00000005815	POLR2E	69	86.897	ENSEASG00005021615	POLR2E	67	81.481	Equus_asinus_asinus
ENSELUG00000005815	POLR2E	100	93.443	ENSECAG00000011124	POLR2E	100	93.443	Equus_caballus
ENSELUG00000005815	POLR2E	100	93.810	ENSFCAG00000007318	POLR2E	100	93.810	Felis_catus
ENSELUG00000005815	POLR2E	91	94.271	ENSFALG00000013986	POLR2E	99	94.271	Ficedula_albicollis
ENSELUG00000005815	POLR2E	100	94.286	ENSFDAG00000014539	POLR2E	100	94.286	Fukomys_damarensis
ENSELUG00000005815	POLR2E	100	98.095	ENSFHEG00000022398	polr2eb	100	98.095	Fundulus_heteroclitus
ENSELUG00000005815	POLR2E	100	97.143	ENSGMOG00000007615	polr2eb	100	97.143	Gadus_morhua
ENSELUG00000005815	POLR2E	100	94.762	ENSGALG00000002591	POLR2E	100	94.762	Gallus_gallus
ENSELUG00000005815	POLR2E	100	97.619	ENSGAFG00000005087	polr2eb	100	97.619	Gambusia_affinis
ENSELUG00000005815	POLR2E	100	97.619	ENSGACG00000013247	polr2eb	100	97.619	Gasterosteus_aculeatus
ENSELUG00000005815	POLR2E	100	94.762	ENSGAGG00000008356	POLR2E	100	94.762	Gopherus_agassizii
ENSELUG00000005815	POLR2E	100	94.286	ENSGGOG00000011267	POLR2E	100	94.286	Gorilla_gorilla
ENSELUG00000005815	POLR2E	68	92.254	ENSHBUG00000011099	polr2eb	100	92.254	Haplochromis_burtoni
ENSELUG00000005815	POLR2E	100	94.286	ENSHGLG00000013330	POLR2E	100	94.286	Heterocephalus_glaber_female
ENSELUG00000005815	POLR2E	100	94.286	ENSHGLG00100011014	POLR2E	100	94.286	Heterocephalus_glaber_male
ENSELUG00000005815	POLR2E	100	96.667	ENSHCOG00000000906	polr2eb	100	96.667	Hippocampus_comes
ENSELUG00000005815	POLR2E	53	95.536	ENSHCOG00000012099	-	88	95.536	Hippocampus_comes
ENSELUG00000005815	POLR2E	100	98.095	ENSIPUG00000019801	polr2e	100	98.095	Ictalurus_punctatus
ENSELUG00000005815	POLR2E	100	94.286	ENSSTOG00000002853	POLR2E	100	94.286	Ictidomys_tridecemlineatus
ENSELUG00000005815	POLR2E	77	77.640	ENSJJAG00000015812	-	100	77.640	Jaculus_jaculus
ENSELUG00000005815	POLR2E	100	94.286	ENSJJAG00000016595	-	100	94.286	Jaculus_jaculus
ENSELUG00000005815	POLR2E	100	87.432	ENSJJAG00000003145	-	100	87.432	Jaculus_jaculus
ENSELUG00000005815	POLR2E	100	98.095	ENSKMAG00000005954	polr2eb	100	98.095	Kryptolebias_marmoratus
ENSELUG00000005815	POLR2E	100	98.095	ENSLBEG00000024802	polr2eb	100	98.095	Labrus_bergylta
ENSELUG00000005815	POLR2E	100	94.762	ENSLACG00000013686	POLR2E	100	94.762	Latimeria_chalumnae
ENSELUG00000005815	POLR2E	77	96.914	ENSLOCG00000004599	POLR2E	100	96.914	Lepisosteus_oculatus
ENSELUG00000005815	POLR2E	100	75.000	ENSLAFG00000025587	POLR2E	100	75.000	Loxodonta_africana
ENSELUG00000005815	POLR2E	100	94.286	ENSMFAG00000002884	POLR2E	100	94.286	Macaca_fascicularis
ENSELUG00000005815	POLR2E	100	94.286	ENSMMUG00000013927	POLR2E	100	94.286	Macaca_mulatta
ENSELUG00000005815	POLR2E	100	94.286	ENSMNEG00000034046	-	100	94.286	Macaca_nemestrina
ENSELUG00000005815	POLR2E	100	63.507	ENSMNEG00000033452	-	100	63.507	Macaca_nemestrina
ENSELUG00000005815	POLR2E	92	77.202	ENSMLEG00000012405	POLR2E	94	77.202	Mandrillus_leucophaeus
ENSELUG00000005815	POLR2E	100	98.095	ENSMAMG00000018703	polr2eb	100	98.095	Mastacembelus_armatus
ENSELUG00000005815	POLR2E	100	97.268	ENSMZEG00005010796	polr2eb	100	97.268	Maylandia_zebra
ENSELUG00000005815	POLR2E	100	93.839	ENSMGAG00000003769	POLR2E	100	93.839	Meleagris_gallopavo
ENSELUG00000005815	POLR2E	100	63.333	ENSMAUG00000011003	-	100	63.333	Mesocricetus_auratus
ENSELUG00000005815	POLR2E	92	93.264	ENSMAUG00000010125	-	100	93.717	Mesocricetus_auratus
ENSELUG00000005815	POLR2E	100	94.286	ENSMICG00000013063	POLR2E	100	94.286	Microcebus_murinus
ENSELUG00000005815	POLR2E	100	94.286	ENSMOCG00000013414	Polr2e	100	94.286	Microtus_ochrogaster
ENSELUG00000005815	POLR2E	100	95.628	ENSMMOG00000001161	polr2eb	100	95.628	Mola_mola
ENSELUG00000005815	POLR2E	91	87.435	ENSMMOG00000001167	polr2eb	88	87.435	Mola_mola
ENSELUG00000005815	POLR2E	100	94.762	ENSMODG00000005494	POLR2E	100	94.762	Monodelphis_domestica
ENSELUG00000005815	POLR2E	100	97.143	ENSMALG00000021888	polr2eb	100	97.143	Monopterus_albus
ENSELUG00000005815	POLR2E	100	94.286	MGP_CAROLIEiJ_G0015561	Polr2e	100	94.286	Mus_caroli
ENSELUG00000005815	POLR2E	100	94.286	ENSMUSG00000004667	Polr2e	100	94.286	Mus_musculus
ENSELUG00000005815	POLR2E	100	94.286	MGP_PahariEiJ_G0030974	Polr2e	100	94.286	Mus_pahari
ENSELUG00000005815	POLR2E	100	94.286	MGP_SPRETEiJ_G0016379	Polr2e	100	94.286	Mus_spretus
ENSELUG00000005815	POLR2E	100	93.333	ENSMPUG00000008953	POLR2E	100	93.333	Mustela_putorius_furo
ENSELUG00000005815	POLR2E	100	94.286	ENSMLUG00000013193	POLR2E	100	94.286	Myotis_lucifugus
ENSELUG00000005815	POLR2E	66	90.580	ENSMLUG00000006376	-	93	84.667	Myotis_lucifugus
ENSELUG00000005815	POLR2E	100	94.286	ENSNGAG00000001147	Polr2e	100	94.286	Nannospalax_galili
ENSELUG00000005815	POLR2E	85	70.950	ENSNGAG00000017344	-	96	70.950	Nannospalax_galili
ENSELUG00000005815	POLR2E	100	97.268	ENSNBRG00000022772	polr2eb	100	97.268	Neolamprologus_brichardi
ENSELUG00000005815	POLR2E	100	71.905	ENSNLEG00000031364	-	100	71.905	Nomascus_leucogenys
ENSELUG00000005815	POLR2E	100	90.995	ENSNLEG00000001207	-	100	90.995	Nomascus_leucogenys
ENSELUG00000005815	POLR2E	100	82.857	ENSOPRG00000008331	POLR2E	100	82.857	Ochotona_princeps
ENSELUG00000005815	POLR2E	100	94.286	ENSODEG00000013230	-	100	94.286	Octodon_degus
ENSELUG00000005815	POLR2E	100	70.833	ENSODEG00000011490	-	100	70.833	Octodon_degus
ENSELUG00000005815	POLR2E	89	83.333	ENSODEG00000007985	-	100	83.333	Octodon_degus
ENSELUG00000005815	POLR2E	100	97.143	ENSONIG00000002519	polr2eb	100	97.143	Oreochromis_niloticus
ENSELUG00000005815	POLR2E	100	97.619	ENSORLG00000015346	polr2eb	100	97.619	Oryzias_latipes
ENSELUG00000005815	POLR2E	100	97.619	ENSORLG00020020700	polr2e	100	97.619	Oryzias_latipes_hni
ENSELUG00000005815	POLR2E	100	97.619	ENSORLG00015016842	polr2e	100	97.619	Oryzias_latipes_hsok
ENSELUG00000005815	POLR2E	100	98.095	ENSOMEG00000002709	polr2eb	100	98.095	Oryzias_melastigma
ENSELUG00000005815	POLR2E	100	94.286	ENSOGAG00000012311	POLR2E	100	94.286	Otolemur_garnettii
ENSELUG00000005815	POLR2E	100	94.286	ENSOARG00000010994	POLR2E	100	94.286	Ovis_aries
ENSELUG00000005815	POLR2E	91	93.717	ENSPPAG00000003145	POLR2E	100	93.717	Pan_paniscus
ENSELUG00000005815	POLR2E	100	93.810	ENSPPRG00000000777	POLR2E	100	93.810	Panthera_pardus
ENSELUG00000005815	POLR2E	90	83.636	ENSPTIG00000012237	POLR2E	98	88.158	Panthera_tigris_altaica
ENSELUG00000005815	POLR2E	100	94.286	ENSPTRG00000010183	POLR2E	100	94.286	Pan_troglodytes
ENSELUG00000005815	POLR2E	100	94.286	ENSPANG00000018011	POLR2E	100	94.286	Papio_anubis
ENSELUG00000005815	POLR2E	100	97.143	ENSPKIG00000009607	POLR2E	100	97.143	Paramormyrops_kingsleyae
ENSELUG00000005815	POLR2E	100	98.095	ENSPKIG00000024123	POLR2E	100	98.095	Paramormyrops_kingsleyae
ENSELUG00000005815	POLR2E	98	90.732	ENSPSIG00000002870	POLR2E	99	90.732	Pelodiscus_sinensis
ENSELUG00000005815	POLR2E	100	97.814	ENSPMGG00000014354	polr2eb	100	97.814	Periophthalmus_magnuspinnatus
ENSELUG00000005815	POLR2E	100	94.286	ENSPEMG00000023261	Polr2e	100	94.286	Peromyscus_maniculatus_bairdii
ENSELUG00000005815	POLR2E	90	94.180	ENSPCIG00000007312	POLR2E	75	94.180	Phascolarctos_cinereus
ENSELUG00000005815	POLR2E	100	97.619	ENSPFOG00000005734	polr2eb	100	97.619	Poecilia_formosa
ENSELUG00000005815	POLR2E	100	97.619	ENSPLAG00000014496	polr2eb	100	97.619	Poecilia_latipinna
ENSELUG00000005815	POLR2E	100	97.619	ENSPMEG00000008053	polr2eb	100	97.619	Poecilia_mexicana
ENSELUG00000005815	POLR2E	100	97.619	ENSPREG00000006489	polr2eb	100	97.619	Poecilia_reticulata
ENSELUG00000005815	POLR2E	100	88.626	ENSPPYG00000009305	POLR2E	100	88.626	Pongo_abelii
ENSELUG00000005815	POLR2E	53	90.991	ENSPCAG00000016605	POLR2E	100	90.991	Procavia_capensis
ENSELUG00000005815	POLR2E	100	94.286	ENSPCOG00000014491	POLR2E	100	94.286	Propithecus_coquereli
ENSELUG00000005815	POLR2E	75	100.000	ENSPVAG00000007718	-	65	100.000	Pteropus_vampyrus
ENSELUG00000005815	POLR2E	90	97.368	ENSPNYG00000019797	polr2eb	96	97.368	Pundamilia_nyererei
ENSELUG00000005815	POLR2E	100	97.619	ENSPNAG00000026263	POLR2E	100	97.619	Pygocentrus_nattereri
ENSELUG00000005815	POLR2E	100	94.286	ENSRNOG00000013545	Polr2e	100	94.286	Rattus_norvegicus
ENSELUG00000005815	POLR2E	100	69.668	ENSRBIG00000027259	-	100	69.668	Rhinopithecus_bieti
ENSELUG00000005815	POLR2E	100	94.286	ENSRBIG00000028726	-	100	94.286	Rhinopithecus_bieti
ENSELUG00000005815	POLR2E	100	94.286	ENSRROG00000043763	POLR2E	100	94.286	Rhinopithecus_roxellana
ENSELUG00000005815	POLR2E	99	44.700	YBR154C	RPB5	98	44.700	Saccharomyces_cerevisiae
ENSELUG00000005815	POLR2E	100	94.286	ENSSBOG00000027241	POLR2E	100	94.286	Saimiri_boliviensis_boliviensis
ENSELUG00000005815	POLR2E	100	94.762	ENSSHAG00000010690	POLR2E	100	94.762	Sarcophilus_harrisii
ENSELUG00000005815	POLR2E	100	98.095	ENSSFOG00015006073	polr2e	100	98.095	Scleropages_formosus
ENSELUG00000005815	POLR2E	100	98.095	ENSSMAG00000012782	polr2eb	100	98.095	Scophthalmus_maximus
ENSELUG00000005815	POLR2E	100	98.095	ENSSDUG00000003352	polr2eb	100	98.095	Seriola_dumerili
ENSELUG00000005815	POLR2E	100	98.095	ENSSLDG00000004965	polr2eb	100	98.095	Seriola_lalandi_dorsalis
ENSELUG00000005815	POLR2E	100	94.762	ENSSPUG00000006114	POLR2E	100	94.762	Sphenodon_punctatus
ENSELUG00000005815	POLR2E	100	98.095	ENSSPAG00000017556	polr2eb	100	98.095	Stegastes_partitus
ENSELUG00000005815	POLR2E	100	94.286	ENSSSCG00000021472	POLR2E	100	94.286	Sus_scrofa
ENSELUG00000005815	POLR2E	64	94.915	ENSTGUG00000000922	POLR2E	99	87.857	Taeniopygia_guttata
ENSELUG00000005815	POLR2E	100	97.814	ENSTRUG00000018238	polr2eb	100	97.814	Takifugu_rubripes
ENSELUG00000005815	POLR2E	100	98.095	ENSTNIG00000013187	polr2eb	100	98.095	Tetraodon_nigroviridis
ENSELUG00000005815	POLR2E	100	93.810	ENSTTRG00000001484	POLR2E	100	93.810	Tursiops_truncatus
ENSELUG00000005815	POLR2E	100	92.896	ENSUAMG00000009166	POLR2E	100	92.896	Ursus_americanus
ENSELUG00000005815	POLR2E	100	94.286	ENSVVUG00000022818	POLR2E	54	94.286	Vulpes_vulpes
ENSELUG00000005815	POLR2E	100	95.714	ENSXETG00000003291	polr2e	100	95.714	Xenopus_tropicalis
ENSELUG00000005815	POLR2E	100	97.268	ENSXCOG00000009197	polr2eb	100	97.268	Xiphophorus_couchianus
ENSELUG00000005815	POLR2E	100	97.619	ENSXMAG00000026495	polr2eb	100	97.619	Xiphophorus_maculatus