EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000005830 (Gene tree)
Gene ID: 105027854
Gene Symbol: nelfe
Alias: rdbp|zgc:92496
Full Name: negative elongation factor complex member E
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 10466 bases
Position: chrLG10:3288480-3298945
Accession: 105027854
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000004698	RRM_1	PF00076.22	4.4e-10	1	1
ENSELUP00000004708	RRM_1	PF00076.22	5.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000011901	-	4907	XM_010900175	ENSELUP00000004708	355 (aa)	XP_010898477	UPI00057647BD
ENSELUT00000011921	-	927	-	ENSELUP00000004698	308 (aa)	-	-

Gene Model

Click here to download ENSELUG00000005830's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005830's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005830	nelfe	71	76.289	ENSG00000204356	NELFE	99	69.182	Homo_sapiens
ENSELUG00000005830	nelfe	71	75.258	ENSAMEG00000002062	NELFE	96	59.184	Ailuropoda_melanoleuca
ENSELUG00000005830	nelfe	53	54.545	ENSACAG00000011678	NELFE	100	60.274	Anolis_carolinensis
ENSELUG00000005830	nelfe	71	76.289	ENSANAG00000038256	NELFE	97	57.853	Aotus_nancymaae
ENSELUG00000005830	nelfe	71	75.258	ENSBTAG00000007453	NELFE	97	57.441	Bos_taurus
ENSELUG00000005830	nelfe	71	76.289	ENSCJAG00000002368	-	96	57.031	Callithrix_jacchus
ENSELUG00000005830	nelfe	71	75.258	ENSCAFG00020000938	NELFE	97	57.702	Canis_lupus_dingo
ENSELUG00000005830	nelfe	71	75.258	ENSCHIG00000013713	NELFE	97	56.919	Capra_hircus
ENSELUG00000005830	nelfe	99	58.021	ENSTSYG00000012132	-	98	56.364	Carlito_syrichta
ENSELUG00000005830	nelfe	71	75.258	ENSCPOG00000031829	NELFE	58	75.258	Cavia_porcellus
ENSELUG00000005830	nelfe	71	76.289	ENSCCAG00000014945	NELFE	97	58.421	Cebus_capucinus
ENSELUG00000005830	nelfe	71	76.289	ENSCATG00000028969	NELFE	97	56.658	Cercocebus_atys
ENSELUG00000005830	nelfe	71	74.227	ENSCLAG00000009684	NELFE	97	56.878	Chinchilla_lanigera
ENSELUG00000005830	nelfe	71	76.289	ENSCSAG00000008969	NELFE	98	57.068	Chlorocebus_sabaeus
ENSELUG00000005830	nelfe	84	55.518	ENSCPBG00000000225	NELFE	92	57.860	Chrysemys_picta_bellii
ENSELUG00000005830	nelfe	71	76.289	ENSCANG00000022451	NELFE	97	56.510	Colobus_angolensis_palliatus
ENSELUG00000005830	nelfe	72	75.258	ENSCGRG00001016608	Nelfe	100	58.839	Cricetulus_griseus_chok1gshd
ENSELUG00000005830	nelfe	64	78.082	ENSCGRG00000014034	Nelfe	93	57.681	Cricetulus_griseus_crigri
ENSELUG00000005830	nelfe	100	78.592	ENSCVAG00000003087	nelfe	99	73.521	Cyprinodon_variegatus
ENSELUG00000005830	nelfe	100	71.831	ENSDARG00000004343	nelfe	100	76.966	Danio_rerio
ENSELUG00000005830	nelfe	93	54.493	ENSDNOG00000006996	-	95	56.287	Dasypus_novemcinctus
ENSELUG00000005830	nelfe	71	75.258	ENSDNOG00000041886	-	97	58.621	Dasypus_novemcinctus
ENSELUG00000005830	nelfe	70	75.258	ENSDORG00000011705	Nelfe	98	55.216	Dipodomys_ordii
ENSELUG00000005830	nelfe	99	45.352	ENSEBUG00000017070	nelfe	99	56.886	Eptatretus_burgeri
ENSELUG00000005830	nelfe	71	75.258	ENSEASG00005015538	NELFE	98	56.667	Equus_asinus_asinus
ENSELUG00000005830	nelfe	71	75.258	ENSECAG00000012274	NELFE	85	58.730	Equus_caballus
ENSELUG00000005830	nelfe	63	74.074	ENSEEUG00000005004	NELFE	98	50.656	Erinaceus_europaeus
ENSELUG00000005830	nelfe	71	75.258	ENSFCAG00000004518	NELFE	97	58.486	Felis_catus
ENSELUG00000005830	nelfe	99	59.444	ENSFDAG00000011589	NELFE	100	60.111	Fukomys_damarensis
ENSELUG00000005830	nelfe	99	71.978	ENSGMOG00000005973	nelfe	100	71.111	Gadus_morhua
ENSELUG00000005830	nelfe	100	58.427	ENSGALG00000045676	NELFE	99	55.337	Gallus_gallus
ENSELUG00000005830	nelfe	100	74.930	ENSGACG00000002935	nelfe	100	72.176	Gasterosteus_aculeatus
ENSELUG00000005830	nelfe	100	57.584	ENSGAGG00000005411	NELFE	100	57.618	Gopherus_agassizii
ENSELUG00000005830	nelfe	71	76.289	ENSGGOG00000002265	NELFE	59	76.289	Gorilla_gorilla
ENSELUG00000005830	nelfe	71	75.258	ENSHGLG00100014073	NELFE	97	49.867	Heterocephalus_glaber_male
ENSELUG00000005830	nelfe	99	60.870	ENSSTOG00000027409	NELFE	97	55.499	Ictidomys_tridecemlineatus
ENSELUG00000005830	nelfe	99	58.708	ENSLAFG00000028155	NELFE	97	55.276	Loxodonta_africana
ENSELUG00000005830	nelfe	71	76.289	ENSMFAG00000036108	-	58	76.289	Macaca_fascicularis
ENSELUG00000005830	nelfe	98	70.732	ENSMMUG00000000735	-	98	58.090	Macaca_mulatta
ENSELUG00000005830	nelfe	98	54.155	ENSMMUG00000041521	-	100	54.213	Macaca_mulatta
ENSELUG00000005830	nelfe	71	76.289	ENSMNEG00000032542	NELFE	97	58.090	Macaca_nemestrina
ENSELUG00000005830	nelfe	71	76.289	ENSMLEG00000030245	NELFE	97	56.658	Mandrillus_leucophaeus
ENSELUG00000005830	nelfe	82	89.600	ENSMAMG00000003031	nelfe	93	69.588	Mastacembelus_armatus
ENSELUG00000005830	nelfe	84	67.717	ENSMGAG00000001297	NELFE	77	65.714	Meleagris_gallopavo
ENSELUG00000005830	nelfe	72	74.227	ENSMAUG00000016812	Nelfe	100	58.995	Mesocricetus_auratus
ENSELUG00000005830	nelfe	99	61.685	ENSMICG00000003287	NELFE	98	62.534	Microcebus_murinus
ENSELUG00000005830	nelfe	72	74.227	ENSMOCG00000003723	Nelfe	100	58.466	Microtus_ochrogaster
ENSELUG00000005830	nelfe	100	70.141	ENSMMOG00000014544	nelfe	100	70.799	Mola_mola
ENSELUG00000005830	nelfe	99	52.727	ENSMODG00000015063	NELFE	84	72.028	Monodelphis_domestica
ENSELUG00000005830	nelfe	72	74.227	MGP_CAROLIEiJ_G0021478	Nelfe	100	57.672	Mus_caroli
ENSELUG00000005830	nelfe	72	74.227	ENSMUSG00000024369	Nelfe	100	57.407	Mus_musculus
ENSELUG00000005830	nelfe	72	74.227	MGP_PahariEiJ_G0020473	Nelfe	100	49.091	Mus_pahari
ENSELUG00000005830	nelfe	72	74.227	MGP_SPRETEiJ_G0022383	Nelfe	100	57.672	Mus_spretus
ENSELUG00000005830	nelfe	71	75.258	ENSMPUG00000010581	NELFE	96	57.292	Mustela_putorius_furo
ENSELUG00000005830	nelfe	72	66.400	ENSMLUG00000030380	-	97	48.718	Myotis_lucifugus
ENSELUG00000005830	nelfe	72	68.041	ENSMLUG00000028069	-	97	53.191	Myotis_lucifugus
ENSELUG00000005830	nelfe	71	75.258	ENSMLUG00000000622	-	95	58.090	Myotis_lucifugus
ENSELUG00000005830	nelfe	72	75.258	ENSNGAG00000016248	Nelfe	100	56.397	Nannospalax_galili
ENSELUG00000005830	nelfe	71	68.293	ENSMEUG00000006053	NELFE	97	50.131	Notamacropus_eugenii
ENSELUG00000005830	nelfe	71	74.227	ENSOPRG00000003942	NELFE	97	57.143	Ochotona_princeps
ENSELUG00000005830	nelfe	71	74.227	ENSODEG00000017670	NELFE	99	57.560	Octodon_degus
ENSELUG00000005830	nelfe	100	66.172	ENSONIG00000013513	nelfe	99	74.510	Oreochromis_niloticus
ENSELUG00000005830	nelfe	71	75.258	ENSOCUG00000007012	NELFE	97	58.575	Oryctolagus_cuniculus
ENSELUG00000005830	nelfe	64	88.372	ENSOMEG00000008581	nelfe	100	67.847	Oryzias_melastigma
ENSELUG00000005830	nelfe	71	75.258	ENSOGAG00000009574	NELFE	96	58.090	Otolemur_garnettii
ENSELUG00000005830	nelfe	71	75.258	ENSOARG00000002616	NELFE	95	56.919	Ovis_aries
ENSELUG00000005830	nelfe	71	76.289	ENSPPAG00000039942	NELFE	97	56.477	Pan_paniscus
ENSELUG00000005830	nelfe	71	75.258	ENSPPRG00000004421	NELFE	97	58.486	Panthera_pardus
ENSELUG00000005830	nelfe	71	75.258	ENSPTIG00000003753	NELFE	97	58.486	Panthera_tigris_altaica
ENSELUG00000005830	nelfe	99	56.117	ENSPTRG00000017996	NELFE	97	56.218	Pan_troglodytes
ENSELUG00000005830	nelfe	71	76.289	ENSPANG00000019366	NELFE	97	56.658	Papio_anubis
ENSELUG00000005830	nelfe	100	78.873	ENSPKIG00000012048	nelfe	100	78.310	Paramormyrops_kingsleyae
ENSELUG00000005830	nelfe	72	73.196	ENSPEMG00000015423	Nelfe	100	58.466	Peromyscus_maniculatus_bairdii
ENSELUG00000005830	nelfe	71	74.227	ENSPCIG00000018791	NELFE	58	68.807	Phascolarctos_cinereus
ENSELUG00000005830	nelfe	100	72.113	ENSPLAG00000018174	nelfe	96	73.876	Poecilia_latipinna
ENSELUG00000005830	nelfe	71	75.258	ENSPPYG00000016471	NELFE	58	75.258	Pongo_abelii
ENSELUG00000005830	nelfe	72	75.258	ENSPCOG00000024944	NELFE	98	58.311	Propithecus_coquereli
ENSELUG00000005830	nelfe	71	75.258	ENSPVAG00000005135	NELFE	97	57.180	Pteropus_vampyrus
ENSELUG00000005830	nelfe	72	74.227	ENSRNOG00000000420	Nelfe	100	49.868	Rattus_norvegicus
ENSELUG00000005830	nelfe	99	70.732	ENSRBIG00000028593	-	97	59.838	Rhinopithecus_bieti
ENSELUG00000005830	nelfe	96	55.312	ENSRBIG00000028905	-	98	52.446	Rhinopithecus_bieti
ENSELUG00000005830	nelfe	71	76.289	ENSRROG00000041993	NELFE	97	57.812	Rhinopithecus_roxellana
ENSELUG00000005830	nelfe	71	76.289	ENSSBOG00000035865	NELFE	96	58.158	Saimiri_boliviensis_boliviensis
ENSELUG00000005830	nelfe	71	74.227	ENSSHAG00000008908	NELFE	97	56.136	Sarcophilus_harrisii
ENSELUG00000005830	nelfe	51	63.243	ENSSFOG00015017039	nelfe	100	73.046	Scleropages_formosus
ENSELUG00000005830	nelfe	92	50.000	ENSSARG00000003684	NELFE	95	54.701	Sorex_araneus
ENSELUG00000005830	nelfe	100	56.319	ENSSPUG00000012971	NELFE	100	56.283	Sphenodon_punctatus
ENSELUG00000005830	nelfe	71	75.258	ENSSSCG00000001423	NELFE	97	57.180	Sus_scrofa
ENSELUG00000005830	nelfe	71	75.258	ENSTTRG00000005923	NELFE	97	62.500	Tursiops_truncatus
ENSELUG00000005830	nelfe	71	75.258	ENSUAMG00000024338	NELFE	97	58.929	Ursus_americanus
ENSELUG00000005830	nelfe	71	75.258	ENSUMAG00000012674	NELFE	97	58.929	Ursus_maritimus
ENSELUG00000005830	nelfe	90	68.852	ENSXETG00000010931	nelfe	71	75.362	Xenopus_tropicalis