EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000005876 (Gene tree)
Gene ID: 105014953
Gene Symbol: rbm18
Alias: zgc:73332
Full Name: RNA binding motif protein 18
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 18684 bases
Position: chrLG14:3145239-3163922
Accession: 105014953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000004742	RRM_1	PF00076.22	6.9e-15	1	1
ENSELUP00000004753	RRM_1	PF00076.22	1.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000011830	-	561	-	ENSELUP00000004742	186 (aa)	-	-
ENSELUT00000011814	-	2280	XM_010877677	ENSELUP00000004753	276 (aa)	XP_010875979	UPI0005769957

Gene Model

Click here to download ENSELUG00000005876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005876's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005876	rbm18	96	70.879	ENSG00000119446	RBM18	95	71.196	Homo_sapiens
ENSELUG00000005876	rbm18	96	79.058	ENSAPOG00000001987	rbm18	99	80.203	Acanthochromis_polyacanthus
ENSELUG00000005876	rbm18	96	70.330	ENSAMEG00000000772	RBM18	95	70.652	Ailuropoda_melanoleuca
ENSELUG00000005876	rbm18	92	74.866	ENSACIG00000005001	rbm18	97	76.166	Amphilophus_citrinellus
ENSELUG00000005876	rbm18	96	78.125	ENSAOCG00000006762	rbm18	98	80.612	Amphiprion_ocellaris
ENSELUG00000005876	rbm18	96	78.646	ENSAPEG00000007972	rbm18	98	80.612	Amphiprion_percula
ENSELUG00000005876	rbm18	100	75.773	ENSATEG00000019164	rbm18	98	78.571	Anabas_testudineus
ENSELUG00000005876	rbm18	96	70.879	ENSANAG00000035441	RBM18	95	71.196	Aotus_nancymaae
ENSELUG00000005876	rbm18	96	76.963	ENSACLG00000019848	rbm18	99	78.788	Astatotilapia_calliptera
ENSELUG00000005876	rbm18	96	83.516	ENSAMXG00000035574	rbm18	98	84.946	Astyanax_mexicanus
ENSELUG00000005876	rbm18	96	71.111	ENSBTAG00000016367	RBM18	94	71.111	Bos_taurus
ENSELUG00000005876	rbm18	96	70.879	ENSCJAG00000046355	RBM18	95	71.196	Callithrix_jacchus
ENSELUG00000005876	rbm18	96	70.330	ENSCAFG00000030041	RBM18	95	70.652	Canis_familiaris
ENSELUG00000005876	rbm18	96	70.330	ENSCAFG00020015174	RBM18	95	70.652	Canis_lupus_dingo
ENSELUG00000005876	rbm18	96	71.111	ENSCHIG00000026444	RBM18	94	71.111	Capra_hircus
ENSELUG00000005876	rbm18	96	70.879	ENSTSYG00000030353	RBM18	95	71.196	Carlito_syrichta
ENSELUG00000005876	rbm18	96	70.330	ENSCPOG00000038004	RBM18	95	71.196	Cavia_porcellus
ENSELUG00000005876	rbm18	96	70.879	ENSCCAG00000035467	RBM18	95	71.196	Cebus_capucinus
ENSELUG00000005876	rbm18	96	70.879	ENSCATG00000035634	RBM18	95	71.196	Cercocebus_atys
ENSELUG00000005876	rbm18	96	70.330	ENSCLAG00000010773	RBM18	95	71.196	Chinchilla_lanigera
ENSELUG00000005876	rbm18	65	79.167	ENSCSAG00000013373	RBM18	82	79.167	Chlorocebus_sabaeus
ENSELUG00000005876	rbm18	81	68.387	ENSCHOG00000001341	RBM18	100	69.032	Choloepus_hoffmanni
ENSELUG00000005876	rbm18	96	71.978	ENSCPBG00000009885	RBM18	97	69.634	Chrysemys_picta_bellii
ENSELUG00000005876	rbm18	74	43.151	ENSCING00000010157	-	86	38.764	Ciona_intestinalis
ENSELUG00000005876	rbm18	55	36.538	ENSCSAVG00000000409	-	81	36.538	Ciona_savignyi
ENSELUG00000005876	rbm18	96	71.429	ENSCANG00000029590	RBM18	95	71.739	Colobus_angolensis_palliatus
ENSELUG00000005876	rbm18	96	70.879	ENSCGRG00001014593	Rbm18	95	71.196	Cricetulus_griseus_chok1gshd
ENSELUG00000005876	rbm18	88	70.659	ENSCGRG00000012247	Rbm18	93	71.257	Cricetulus_griseus_crigri
ENSELUG00000005876	rbm18	96	76.562	ENSCSEG00000017587	rbm18	98	79.082	Cynoglossus_semilaevis
ENSELUG00000005876	rbm18	96	76.042	ENSCVAG00000012436	rbm18	93	73.460	Cyprinodon_variegatus
ENSELUG00000005876	rbm18	96	81.868	ENSDARG00000044255	rbm18	98	82.796	Danio_rerio
ENSELUG00000005876	rbm18	96	72.222	ENSDNOG00000031658	RBM18	94	72.222	Dasypus_novemcinctus
ENSELUG00000005876	rbm18	96	70.879	ENSDORG00000028540	Rbm18	95	71.196	Dipodomys_ordii
ENSELUG00000005876	rbm18	77	37.255	FBgn0030571	CG14414	70	34.483	Drosophila_melanogaster
ENSELUG00000005876	rbm18	96	64.246	ENSETEG00000009832	RBM18	94	64.246	Echinops_telfairi
ENSELUG00000005876	rbm18	87	56.213	ENSEBUG00000009127	rbm18	79	58.824	Eptatretus_burgeri
ENSELUG00000005876	rbm18	96	70.330	ENSEASG00005021084	RBM18	95	70.652	Equus_asinus_asinus
ENSELUG00000005876	rbm18	96	70.330	ENSECAG00000024639	RBM18	95	70.652	Equus_caballus
ENSELUG00000005876	rbm18	96	56.667	ENSEEUG00000002828	RBM18	95	56.593	Erinaceus_europaeus
ENSELUG00000005876	rbm18	96	70.330	ENSFCAG00000037774	RBM18	95	70.652	Felis_catus
ENSELUG00000005876	rbm18	81	69.079	ENSFALG00000001940	RBM18	96	69.281	Ficedula_albicollis
ENSELUG00000005876	rbm18	96	70.330	ENSFDAG00000012679	RBM18	95	71.196	Fukomys_damarensis
ENSELUG00000005876	rbm18	96	77.083	ENSFHEG00000012457	rbm18	99	77.778	Fundulus_heteroclitus
ENSELUG00000005876	rbm18	96	72.021	ENSGMOG00000019735	rbm18	99	74.112	Gadus_morhua
ENSELUG00000005876	rbm18	96	69.832	ENSGALG00000028167	RBM18	95	69.780	Gallus_gallus
ENSELUG00000005876	rbm18	96	77.604	ENSGAFG00000007767	rbm18	98	79.592	Gambusia_affinis
ENSELUG00000005876	rbm18	96	75.000	ENSGACG00000017348	rbm18	98	73.737	Gasterosteus_aculeatus
ENSELUG00000005876	rbm18	96	72.067	ENSGAGG00000018318	RBM18	97	69.841	Gopherus_agassizii
ENSELUG00000005876	rbm18	96	70.879	ENSGGOG00000011052	RBM18	95	71.196	Gorilla_gorilla
ENSELUG00000005876	rbm18	96	76.963	ENSHBUG00000015237	rbm18	99	78.788	Haplochromis_burtoni
ENSELUG00000005876	rbm18	96	70.330	ENSHGLG00000011073	RBM18	95	71.196	Heterocephalus_glaber_female
ENSELUG00000005876	rbm18	96	70.330	ENSHGLG00100005536	RBM18	95	71.196	Heterocephalus_glaber_male
ENSELUG00000005876	rbm18	86	59.146	ENSHGLG00100006247	-	92	60.000	Heterocephalus_glaber_male
ENSELUG00000005876	rbm18	96	81.183	ENSHCOG00000003148	rbm18	98	80.412	Hippocampus_comes
ENSELUG00000005876	rbm18	96	80.769	ENSIPUG00000021512	rbm18	81	82.258	Ictalurus_punctatus
ENSELUG00000005876	rbm18	96	63.388	ENSSTOG00000032266	-	90	64.327	Ictidomys_tridecemlineatus
ENSELUG00000005876	rbm18	96	70.879	ENSSTOG00000022388	-	95	71.196	Ictidomys_tridecemlineatus
ENSELUG00000005876	rbm18	96	68.132	ENSJJAG00000010974	-	95	68.478	Jaculus_jaculus
ENSELUG00000005876	rbm18	65	79.167	ENSJJAG00000009581	-	75	79.167	Jaculus_jaculus
ENSELUG00000005876	rbm18	96	76.042	ENSKMAG00000010679	rbm18	85	77.273	Kryptolebias_marmoratus
ENSELUG00000005876	rbm18	96	75.521	ENSLBEG00000023896	rbm18	99	76.263	Labrus_bergylta
ENSELUG00000005876	rbm18	70	77.692	ENSLACG00000009920	RBM18	92	77.692	Latimeria_chalumnae
ENSELUG00000005876	rbm18	96	70.330	ENSLAFG00000012134	RBM18	95	70.652	Loxodonta_africana
ENSELUG00000005876	rbm18	96	70.879	ENSMFAG00000000443	RBM18	95	71.196	Macaca_fascicularis
ENSELUG00000005876	rbm18	96	70.879	ENSMMUG00000011455	RBM18	95	71.196	Macaca_mulatta
ENSELUG00000005876	rbm18	96	70.879	ENSMNEG00000035374	RBM18	95	71.196	Macaca_nemestrina
ENSELUG00000005876	rbm18	96	70.879	ENSMLEG00000043105	RBM18	95	71.196	Mandrillus_leucophaeus
ENSELUG00000005876	rbm18	96	77.604	ENSMAMG00000009239	rbm18	98	80.612	Mastacembelus_armatus
ENSELUG00000005876	rbm18	96	76.440	ENSMZEG00005017921	rbm18	98	79.592	Maylandia_zebra
ENSELUG00000005876	rbm18	95	63.483	ENSMGAG00000016888	RBM18	87	68.590	Meleagris_gallopavo
ENSELUG00000005876	rbm18	96	72.222	ENSMAUG00000021365	Rbm18	94	72.222	Mesocricetus_auratus
ENSELUG00000005876	rbm18	96	71.429	ENSMICG00000046793	RBM18	95	71.739	Microcebus_murinus
ENSELUG00000005876	rbm18	96	70.330	ENSMOCG00000000613	Rbm18	95	70.652	Microtus_ochrogaster
ENSELUG00000005876	rbm18	96	68.342	ENSMMOG00000021319	rbm18	98	68.966	Mola_mola
ENSELUG00000005876	rbm18	81	69.737	ENSMODG00000019688	RBM18	100	69.935	Monodelphis_domestica
ENSELUG00000005876	rbm18	96	78.125	ENSMALG00000017766	rbm18	99	79.293	Monopterus_albus
ENSELUG00000005876	rbm18	96	72.222	MGP_CAROLIEiJ_G0023488	Rbm18	94	72.222	Mus_caroli
ENSELUG00000005876	rbm18	96	72.222	ENSMUSG00000026889	Rbm18	94	72.222	Mus_musculus
ENSELUG00000005876	rbm18	96	71.667	MGP_PahariEiJ_G0024945	Rbm18	94	71.667	Mus_pahari
ENSELUG00000005876	rbm18	96	72.222	MGP_SPRETEiJ_G0024405	Rbm18	94	72.222	Mus_spretus
ENSELUG00000005876	rbm18	96	70.330	ENSMPUG00000007246	RBM18	95	70.652	Mustela_putorius_furo
ENSELUG00000005876	rbm18	96	70.330	ENSMLUG00000013224	-	95	70.652	Myotis_lucifugus
ENSELUG00000005876	rbm18	96	70.330	ENSMLUG00000004794	-	95	70.652	Myotis_lucifugus
ENSELUG00000005876	rbm18	96	70.879	ENSNGAG00000000041	Rbm18	95	71.196	Nannospalax_galili
ENSELUG00000005876	rbm18	99	74.112	ENSNBRG00000021128	rbm18	99	78.788	Neolamprologus_brichardi
ENSELUG00000005876	rbm18	96	70.879	ENSNLEG00000017174	RBM18	95	71.196	Nomascus_leucogenys
ENSELUG00000005876	rbm18	95	56.354	ENSMEUG00000015704	RBM18	95	57.923	Notamacropus_eugenii
ENSELUG00000005876	rbm18	96	72.222	ENSOPRG00000010381	RBM18	94	72.222	Ochotona_princeps
ENSELUG00000005876	rbm18	96	70.330	ENSODEG00000002055	RBM18	95	71.196	Octodon_degus
ENSELUG00000005876	rbm18	96	76.440	ENSONIG00000003723	rbm18	98	79.592	Oreochromis_niloticus
ENSELUG00000005876	rbm18	96	70.330	ENSOANG00000008200	RBM18	95	71.196	Ornithorhynchus_anatinus
ENSELUG00000005876	rbm18	96	70.330	ENSOCUG00000008527	RBM18	95	70.652	Oryctolagus_cuniculus
ENSELUG00000005876	rbm18	96	73.057	ENSORLG00000009962	rbm18	99	75.127	Oryzias_latipes
ENSELUG00000005876	rbm18	96	73.057	ENSORLG00020013452	rbm18	99	74.372	Oryzias_latipes_hni
ENSELUG00000005876	rbm18	96	73.057	ENSORLG00015001711	rbm18	96	74.869	Oryzias_latipes_hsok
ENSELUG00000005876	rbm18	96	74.093	ENSOMEG00000001492	rbm18	99	76.142	Oryzias_melastigma
ENSELUG00000005876	rbm18	96	70.879	ENSOGAG00000015104	RBM18	95	71.196	Otolemur_garnettii
ENSELUG00000005876	rbm18	96	71.111	ENSOARG00000014228	RBM18	94	71.111	Ovis_aries
ENSELUG00000005876	rbm18	96	70.879	ENSPPAG00000023355	RBM18	95	71.196	Pan_paniscus
ENSELUG00000005876	rbm18	96	70.330	ENSPPRG00000011360	RBM18	95	70.652	Panthera_pardus
ENSELUG00000005876	rbm18	96	70.330	ENSPTIG00000007126	RBM18	95	70.652	Panthera_tigris_altaica
ENSELUG00000005876	rbm18	96	70.879	ENSPTRG00000021323	RBM18	95	71.196	Pan_troglodytes
ENSELUG00000005876	rbm18	96	70.879	ENSPANG00000025845	RBM18	95	71.196	Papio_anubis
ENSELUG00000005876	rbm18	76	78.169	ENSPKIG00000005430	rbm18	78	81.159	Paramormyrops_kingsleyae
ENSELUG00000005876	rbm18	96	71.978	ENSPSIG00000013631	RBM18	99	70.681	Pelodiscus_sinensis
ENSELUG00000005876	rbm18	96	77.174	ENSPMGG00000023951	rbm18	96	75.532	Periophthalmus_magnuspinnatus
ENSELUG00000005876	rbm18	80	59.740	ENSPMAG00000000630	rbm18	83	65.714	Petromyzon_marinus
ENSELUG00000005876	rbm18	96	71.429	ENSPCIG00000025526	RBM18	95	71.739	Phascolarctos_cinereus
ENSELUG00000005876	rbm18	96	77.604	ENSPFOG00000019706	rbm18	98	79.592	Poecilia_formosa
ENSELUG00000005876	rbm18	96	77.604	ENSPLAG00000005571	rbm18	98	79.592	Poecilia_latipinna
ENSELUG00000005876	rbm18	96	77.604	ENSPMEG00000013977	rbm18	98	79.592	Poecilia_mexicana
ENSELUG00000005876	rbm18	96	77.604	ENSPREG00000009157	rbm18	98	79.592	Poecilia_reticulata
ENSELUG00000005876	rbm18	96	70.879	ENSPPYG00000019569	RBM18	95	71.196	Pongo_abelii
ENSELUG00000005876	rbm18	65	79.167	ENSPCAG00000011245	RBM18	88	79.167	Procavia_capensis
ENSELUG00000005876	rbm18	96	70.879	ENSPCOG00000024474	RBM18	95	71.196	Propithecus_coquereli
ENSELUG00000005876	rbm18	96	70.330	ENSPVAG00000000863	RBM18	95	70.652	Pteropus_vampyrus
ENSELUG00000005876	rbm18	96	76.963	ENSPNYG00000012421	rbm18	99	78.788	Pundamilia_nyererei
ENSELUG00000005876	rbm18	96	82.418	ENSPNAG00000017660	rbm18	98	83.784	Pygocentrus_nattereri
ENSELUG00000005876	rbm18	96	71.667	ENSRNOG00000006763	Rbm18	94	71.667	Rattus_norvegicus
ENSELUG00000005876	rbm18	96	71.429	ENSRBIG00000040177	RBM18	95	71.739	Rhinopithecus_bieti
ENSELUG00000005876	rbm18	96	71.429	ENSRROG00000031364	RBM18	95	71.739	Rhinopithecus_roxellana
ENSELUG00000005876	rbm18	96	70.879	ENSSBOG00000024806	RBM18	95	71.196	Saimiri_boliviensis_boliviensis
ENSELUG00000005876	rbm18	96	71.429	ENSSHAG00000012257	RBM18	95	71.739	Sarcophilus_harrisii
ENSELUG00000005876	rbm18	96	85.556	ENSSFOG00015001100	rbm18	99	83.784	Scleropages_formosus
ENSELUG00000005876	rbm18	96	76.042	ENSSMAG00000020138	rbm18	99	76.768	Scophthalmus_maximus
ENSELUG00000005876	rbm18	96	77.083	ENSSDUG00000016203	rbm18	96	79.082	Seriola_dumerili
ENSELUG00000005876	rbm18	96	77.083	ENSSLDG00000016329	rbm18	98	79.082	Seriola_lalandi_dorsalis
ENSELUG00000005876	rbm18	81	68.421	ENSSPUG00000001601	RBM18	87	69.281	Sphenodon_punctatus
ENSELUG00000005876	rbm18	96	78.125	ENSSPAG00000005394	rbm18	98	80.612	Stegastes_partitus
ENSELUG00000005876	rbm18	96	72.222	ENSSSCG00000030089	RBM18	94	72.222	Sus_scrofa
ENSELUG00000005876	rbm18	81	68.421	ENSTGUG00000006802	RBM18	99	68.627	Taeniopygia_guttata
ENSELUG00000005876	rbm18	96	73.958	ENSTRUG00000005812	rbm18	98	75.000	Takifugu_rubripes
ENSELUG00000005876	rbm18	94	76.796	ENSTNIG00000009141	rbm18	94	78.689	Tetraodon_nigroviridis
ENSELUG00000005876	rbm18	81	69.032	ENSTBEG00000016520	RBM18	100	69.677	Tupaia_belangeri
ENSELUG00000005876	rbm18	96	70.330	ENSUAMG00000014431	RBM18	95	70.652	Ursus_americanus
ENSELUG00000005876	rbm18	96	70.330	ENSUMAG00000003445	RBM18	95	70.652	Ursus_maritimus
ENSELUG00000005876	rbm18	96	70.330	ENSVPAG00000008618	RBM18	95	70.652	Vicugna_pacos
ENSELUG00000005876	rbm18	96	70.330	ENSVVUG00000009442	RBM18	95	70.652	Vulpes_vulpes
ENSELUG00000005876	rbm18	96	65.730	ENSXETG00000016328	rbm18	95	65.574	Xenopus_tropicalis
ENSELUG00000005876	rbm18	96	78.125	ENSXMAG00000003538	rbm18	99	78.788	Xiphophorus_maculatus