EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000005928 (Gene tree)
Gene ID: 105010716
Gene Symbol: polr2d
Alias: RPB4
Full Name: RNA polymerase II subunit D
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 4414 bases
Position: chrLG01:17083617-17088030
Accession: 105010716
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000004809	RNA_pol_Rpb4	PF03874.16	6e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000011724	-	4015	-	ENSELUP00000004809	143 (aa)	-	C1BXX5

Gene Model

Click here to download ENSELUG00000005928's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03020	RNA polymerase	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005928's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005928	polr2d	99	91.489	ENSG00000144231	POLR2D	100	96.154	Homo_sapiens
ENSELUG00000005928	polr2d	100	93.750	ENSAPOG00000023553	polr2d	100	93.750	Acanthochromis_polyacanthus
ENSELUG00000005928	polr2d	99	90.210	ENSAMEG00000011746	POLR2D	99	90.210	Ailuropoda_melanoleuca
ENSELUG00000005928	polr2d	100	93.750	ENSAOCG00000007295	polr2d	100	93.750	Amphiprion_ocellaris
ENSELUG00000005928	polr2d	100	93.750	ENSAPEG00000018714	polr2d	100	93.750	Amphiprion_percula
ENSELUG00000005928	polr2d	100	94.444	ENSATEG00000020416	polr2d	100	94.444	Anabas_testudineus
ENSELUG00000005928	polr2d	100	91.608	ENSACAG00000005255	POLR2D	100	91.608	Anolis_carolinensis
ENSELUG00000005928	polr2d	99	91.489	ENSANAG00000019959	POLR2D	99	91.489	Aotus_nancymaae
ENSELUG00000005928	polr2d	100	93.750	ENSACLG00000009919	polr2d	100	71.528	Astatotilapia_calliptera
ENSELUG00000005928	polr2d	100	94.406	ENSAMXG00000008954	polr2d	100	94.406	Astyanax_mexicanus
ENSELUG00000005928	polr2d	99	91.489	ENSBTAG00000053244	POLR2D	99	91.489	Bos_taurus
ENSELUG00000005928	polr2d	99	59.028	WBGene00018391	rpb-4	100	59.028	Caenorhabditis_elegans
ENSELUG00000005928	polr2d	99	90.780	ENSCJAG00000021814	-	99	90.780	Callithrix_jacchus
ENSELUG00000005928	polr2d	99	91.489	ENSCJAG00000042216	-	99	91.489	Callithrix_jacchus
ENSELUG00000005928	polr2d	99	91.489	ENSCAFG00000004311	POLR2D	99	91.489	Canis_familiaris
ENSELUG00000005928	polr2d	99	91.489	ENSCAFG00020003617	POLR2D	99	91.489	Canis_lupus_dingo
ENSELUG00000005928	polr2d	100	90.909	ENSCHIG00000025995	POLR2D	100	90.909	Capra_hircus
ENSELUG00000005928	polr2d	82	94.872	ENSTSYG00000036021	POLR2D	100	94.872	Carlito_syrichta
ENSELUG00000005928	polr2d	100	90.909	ENSCPOG00000002571	POLR2D	100	90.909	Cavia_porcellus
ENSELUG00000005928	polr2d	99	91.489	ENSCCAG00000037709	POLR2D	99	91.489	Cebus_capucinus
ENSELUG00000005928	polr2d	100	91.608	ENSCATG00000036749	POLR2D	100	91.608	Cercocebus_atys
ENSELUG00000005928	polr2d	99	90.780	ENSCLAG00000004449	POLR2D	99	90.780	Chinchilla_lanigera
ENSELUG00000005928	polr2d	100	91.608	ENSCSAG00000016861	POLR2D	100	91.608	Chlorocebus_sabaeus
ENSELUG00000005928	polr2d	82	95.726	ENSCHOG00000013850	POLR2D	100	95.726	Choloepus_hoffmanni
ENSELUG00000005928	polr2d	99	92.199	ENSCPBG00000019132	POLR2D	50	92.199	Chrysemys_picta_bellii
ENSELUG00000005928	polr2d	90	87.500	ENSCING00000011474	-	96	87.500	Ciona_intestinalis
ENSELUG00000005928	polr2d	99	81.560	ENSCSAVG00000008353	-	97	81.560	Ciona_savignyi
ENSELUG00000005928	polr2d	99	91.489	ENSCANG00000043665	POLR2D	99	91.489	Colobus_angolensis_palliatus
ENSELUG00000005928	polr2d	99	91.489	ENSCGRG00001013608	Polr2d	99	91.489	Cricetulus_griseus_chok1gshd
ENSELUG00000005928	polr2d	82	95.726	ENSCGRG00000012624	Polr2d	100	95.726	Cricetulus_griseus_crigri
ENSELUG00000005928	polr2d	100	93.750	ENSCSEG00000006147	polr2d	100	93.750	Cynoglossus_semilaevis
ENSELUG00000005928	polr2d	100	93.056	ENSCVAG00000000779	polr2d	100	93.056	Cyprinodon_variegatus
ENSELUG00000005928	polr2d	100	94.406	ENSDARG00000076509	polr2d	100	94.406	Danio_rerio
ENSELUG00000005928	polr2d	100	92.308	ENSDNOG00000008527	POLR2D	100	92.308	Dasypus_novemcinctus
ENSELUG00000005928	polr2d	99	90.780	ENSDORG00000026897	Polr2d	99	90.780	Dipodomys_ordii
ENSELUG00000005928	polr2d	93	78.947	FBgn0263757	Rpb4	96	78.947	Drosophila_melanogaster
ENSELUG00000005928	polr2d	99	90.071	ENSEBUG00000007675	polr2d	99	90.071	Eptatretus_burgeri
ENSELUG00000005928	polr2d	99	91.489	ENSEASG00005007103	POLR2D	99	91.489	Equus_asinus_asinus
ENSELUG00000005928	polr2d	99	91.489	ENSECAG00000000556	POLR2D	99	91.489	Equus_caballus
ENSELUG00000005928	polr2d	99	91.489	ENSFCAG00000027816	POLR2D	99	91.489	Felis_catus
ENSELUG00000005928	polr2d	99	91.489	ENSFALG00000003528	POLR2D	99	91.489	Ficedula_albicollis
ENSELUG00000005928	polr2d	99	90.071	ENSFDAG00000007217	POLR2D	99	90.071	Fukomys_damarensis
ENSELUG00000005928	polr2d	100	95.105	ENSGMOG00000001823	polr2d	99	95.105	Gadus_morhua
ENSELUG00000005928	polr2d	99	91.489	ENSGALG00000002057	POLR2D	99	91.489	Gallus_gallus
ENSELUG00000005928	polr2d	100	93.750	ENSGAFG00000016932	polr2d	71	93.750	Gambusia_affinis
ENSELUG00000005928	polr2d	100	91.667	ENSGACG00000004639	polr2d	100	91.667	Gasterosteus_aculeatus
ENSELUG00000005928	polr2d	99	92.199	ENSGAGG00000021308	POLR2D	99	92.199	Gopherus_agassizii
ENSELUG00000005928	polr2d	99	91.489	ENSGGOG00000004723	POLR2D	99	91.489	Gorilla_gorilla
ENSELUG00000005928	polr2d	99	90.780	ENSHGLG00000016570	Polr2d	99	90.780	Heterocephalus_glaber_female
ENSELUG00000005928	polr2d	99	90.780	ENSHGLG00100013785	Polr2d	99	90.780	Heterocephalus_glaber_male
ENSELUG00000005928	polr2d	97	92.806	ENSHCOG00000006425	polr2d	98	92.806	Hippocampus_comes
ENSELUG00000005928	polr2d	100	93.706	ENSIPUG00000011192	polr2d	100	93.706	Ictalurus_punctatus
ENSELUG00000005928	polr2d	99	89.362	ENSSTOG00000023329	POLR2D	99	89.362	Ictidomys_tridecemlineatus
ENSELUG00000005928	polr2d	100	91.608	ENSJJAG00000015053	-	100	91.608	Jaculus_jaculus
ENSELUG00000005928	polr2d	98	84.286	ENSJJAG00000000783	-	99	84.286	Jaculus_jaculus
ENSELUG00000005928	polr2d	82	90.598	ENSJJAG00000005723	-	94	90.598	Jaculus_jaculus
ENSELUG00000005928	polr2d	85	94.262	ENSKMAG00000010677	polr2d	68	94.262	Kryptolebias_marmoratus
ENSELUG00000005928	polr2d	99	94.326	ENSLACG00000017253	POLR2D	99	94.326	Latimeria_chalumnae
ENSELUG00000005928	polr2d	100	94.444	ENSLOCG00000009106	polr2d	100	94.444	Lepisosteus_oculatus
ENSELUG00000005928	polr2d	99	91.489	ENSLAFG00000001848	POLR2D	99	91.489	Loxodonta_africana
ENSELUG00000005928	polr2d	100	91.608	ENSMFAG00000031937	POLR2D	100	91.608	Macaca_fascicularis
ENSELUG00000005928	polr2d	100	91.608	ENSMMUG00000001989	POLR2D	100	91.608	Macaca_mulatta
ENSELUG00000005928	polr2d	100	91.608	ENSMNEG00000035505	POLR2D	100	91.608	Macaca_nemestrina
ENSELUG00000005928	polr2d	100	91.608	ENSMLEG00000035827	POLR2D	100	91.608	Mandrillus_leucophaeus
ENSELUG00000005928	polr2d	99	91.489	ENSMGAG00000001248	POLR2D	99	91.489	Meleagris_gallopavo
ENSELUG00000005928	polr2d	99	90.780	ENSMAUG00000014518	Polr2d	99	90.780	Mesocricetus_auratus
ENSELUG00000005928	polr2d	99	90.780	ENSMICG00000009931	POLR2D	99	90.780	Microcebus_murinus
ENSELUG00000005928	polr2d	99	88.652	ENSMOCG00000019367	Polr2d	99	88.652	Microtus_ochrogaster
ENSELUG00000005928	polr2d	99	75.177	ENSMODG00000025032	-	99	75.177	Monodelphis_domestica
ENSELUG00000005928	polr2d	99	75.887	ENSMODG00000025033	-	99	75.887	Monodelphis_domestica
ENSELUG00000005928	polr2d	99	76.596	ENSMODG00000025030	-	99	76.596	Monodelphis_domestica
ENSELUG00000005928	polr2d	99	75.887	ENSMODG00000025036	-	99	75.887	Monodelphis_domestica
ENSELUG00000005928	polr2d	99	75.887	ENSMODG00000025034	-	99	75.887	Monodelphis_domestica
ENSELUG00000005928	polr2d	99	75.887	ENSMODG00000025035	-	99	75.887	Monodelphis_domestica
ENSELUG00000005928	polr2d	99	75.887	ENSMODG00000025031	-	99	75.887	Monodelphis_domestica
ENSELUG00000005928	polr2d	99	92.199	ENSMODG00000018653	-	99	92.199	Monodelphis_domestica
ENSELUG00000005928	polr2d	99	75.887	ENSMODG00000025029	-	99	75.887	Monodelphis_domestica
ENSELUG00000005928	polr2d	99	76.596	ENSMODG00000025028	-	99	76.596	Monodelphis_domestica
ENSELUG00000005928	polr2d	99	76.596	ENSMODG00000025027	-	99	76.596	Monodelphis_domestica
ENSELUG00000005928	polr2d	99	76.596	ENSMODG00000025026	-	99	76.596	Monodelphis_domestica
ENSELUG00000005928	polr2d	100	93.750	ENSMALG00000018266	polr2d	100	93.750	Monopterus_albus
ENSELUG00000005928	polr2d	99	91.489	MGP_CAROLIEiJ_G0022066	Polr2d	99	91.489	Mus_caroli
ENSELUG00000005928	polr2d	99	91.489	ENSMUSG00000024258	Polr2d	99	91.489	Mus_musculus
ENSELUG00000005928	polr2d	99	91.489	MGP_PahariEiJ_G0018800	Polr2d	99	91.489	Mus_pahari
ENSELUG00000005928	polr2d	99	91.489	MGP_SPRETEiJ_G0022977	Polr2d	99	91.489	Mus_spretus
ENSELUG00000005928	polr2d	99	91.489	ENSMPUG00000016685	POLR2D	99	91.489	Mustela_putorius_furo
ENSELUG00000005928	polr2d	83	95.763	ENSMLUG00000006862	POLR2D	100	95.763	Myotis_lucifugus
ENSELUG00000005928	polr2d	99	91.489	ENSNGAG00000014862	Polr2d	99	91.489	Nannospalax_galili
ENSELUG00000005928	polr2d	99	91.489	ENSNLEG00000027191	POLR2D	99	91.489	Nomascus_leucogenys
ENSELUG00000005928	polr2d	82	94.872	ENSOPRG00000005327	POLR2D	100	94.872	Ochotona_princeps
ENSELUG00000005928	polr2d	99	90.780	ENSODEG00000005262	POLR2D	99	90.780	Octodon_degus
ENSELUG00000005928	polr2d	100	94.444	ENSONIG00000017290	polr2d	100	94.444	Oreochromis_niloticus
ENSELUG00000005928	polr2d	83	96.610	ENSOANG00000013216	POLR2D	100	96.610	Ornithorhynchus_anatinus
ENSELUG00000005928	polr2d	99	84.507	ENSOCUG00000021449	-	99	84.507	Oryctolagus_cuniculus
ENSELUG00000005928	polr2d	98	90.000	ENSOCUG00000023403	-	99	90.000	Oryctolagus_cuniculus
ENSELUG00000005928	polr2d	99	92.254	ENSORLG00000005266	polr2d	99	92.254	Oryzias_latipes
ENSELUG00000005928	polr2d	99	92.254	ENSORLG00020006647	polr2d	99	92.254	Oryzias_latipes_hni
ENSELUG00000005928	polr2d	99	92.254	ENSORLG00015003222	polr2d	99	92.254	Oryzias_latipes_hsok
ENSELUG00000005928	polr2d	99	92.958	ENSOMEG00000018915	polr2d	99	92.958	Oryzias_melastigma
ENSELUG00000005928	polr2d	99	89.510	ENSOGAG00000017118	POLR2D	99	89.510	Otolemur_garnettii
ENSELUG00000005928	polr2d	100	90.909	ENSOARG00000015995	POLR2D	100	90.909	Ovis_aries
ENSELUG00000005928	polr2d	99	91.489	ENSPPRG00000020222	POLR2D	99	91.489	Panthera_pardus
ENSELUG00000005928	polr2d	99	91.489	ENSPTIG00000018618	POLR2D	99	91.489	Panthera_tigris_altaica
ENSELUG00000005928	polr2d	99	91.489	ENSPTRG00000012436	POLR2D	99	91.489	Pan_troglodytes
ENSELUG00000005928	polr2d	100	91.608	ENSPANG00000018602	POLR2D	100	91.608	Papio_anubis
ENSELUG00000005928	polr2d	99	93.662	ENSPKIG00000012166	polr2d	99	93.662	Paramormyrops_kingsleyae
ENSELUG00000005928	polr2d	83	96.610	ENSPSIG00000002873	POLR2D	100	96.610	Pelodiscus_sinensis
ENSELUG00000005928	polr2d	99	91.489	ENSPEMG00000018244	Polr2d	99	91.489	Peromyscus_maniculatus_bairdii
ENSELUG00000005928	polr2d	100	87.413	ENSPMAG00000005021	polr2d	99	87.413	Petromyzon_marinus
ENSELUG00000005928	polr2d	100	93.750	ENSPFOG00000008969	polr2d	100	93.750	Poecilia_formosa
ENSELUG00000005928	polr2d	100	93.750	ENSPLAG00000017210	polr2d	100	93.750	Poecilia_latipinna
ENSELUG00000005928	polr2d	100	93.750	ENSPMEG00000005160	polr2d	100	93.750	Poecilia_mexicana
ENSELUG00000005928	polr2d	73	98.077	ENSPREG00000021862	polr2d	100	98.077	Poecilia_reticulata
ENSELUG00000005928	polr2d	99	91.489	ENSPPYG00000012759	POLR2D	99	91.489	Pongo_abelii
ENSELUG00000005928	polr2d	99	91.489	ENSPCAG00000001396	POLR2D	99	91.489	Procavia_capensis
ENSELUG00000005928	polr2d	99	90.780	ENSPCOG00000022076	POLR2D	99	90.780	Propithecus_coquereli
ENSELUG00000005928	polr2d	99	91.489	ENSPVAG00000004002	POLR2D	99	91.489	Pteropus_vampyrus
ENSELUG00000005928	polr2d	100	94.406	ENSPNAG00000018246	polr2d	100	94.406	Pygocentrus_nattereri
ENSELUG00000005928	polr2d	99	91.489	ENSRNOG00000016231	Polr2d	99	91.489	Rattus_norvegicus
ENSELUG00000005928	polr2d	99	91.489	ENSRBIG00000039326	POLR2D	99	91.489	Rhinopithecus_bieti
ENSELUG00000005928	polr2d	99	91.489	ENSRROG00000023289	POLR2D	99	91.489	Rhinopithecus_roxellana
ENSELUG00000005928	polr2d	99	92.199	ENSSHAG00000014817	-	99	92.199	Sarcophilus_harrisii
ENSELUG00000005928	polr2d	92	99.237	ENSSFOG00015024204	polr2d	99	94.366	Scleropages_formosus
ENSELUG00000005928	polr2d	100	93.750	ENSSDUG00000006060	polr2d	100	93.750	Seriola_dumerili
ENSELUG00000005928	polr2d	93	97.744	ENSSLDG00000024485	polr2d	100	93.103	Seriola_lalandi_dorsalis
ENSELUG00000005928	polr2d	82	94.872	ENSSARG00000009037	POLR2D	100	94.872	Sorex_araneus
ENSELUG00000005928	polr2d	99	91.489	ENSSPUG00000014915	POLR2D	99	91.489	Sphenodon_punctatus
ENSELUG00000005928	polr2d	100	95.139	ENSSPAG00000013386	polr2d	100	95.139	Stegastes_partitus
ENSELUG00000005928	polr2d	99	91.489	ENSSSCG00000039230	POLR2D	99	91.489	Sus_scrofa
ENSELUG00000005928	polr2d	100	90.210	ENSTGUG00000005773	POLR2D	100	90.210	Taeniopygia_guttata
ENSELUG00000005928	polr2d	100	94.406	ENSTRUG00000004740	polr2d	100	94.406	Takifugu_rubripes
ENSELUG00000005928	polr2d	100	95.105	ENSTNIG00000011210	polr2d	100	95.105	Tetraodon_nigroviridis
ENSELUG00000005928	polr2d	82	95.726	ENSTBEG00000006081	POLR2D	100	95.726	Tupaia_belangeri
ENSELUG00000005928	polr2d	82	95.726	ENSTTRG00000010055	POLR2D	100	95.726	Tursiops_truncatus
ENSELUG00000005928	polr2d	91	94.615	ENSUAMG00000024374	POLR2D	98	94.615	Ursus_americanus
ENSELUG00000005928	polr2d	84	95.000	ENSUMAG00000008280	POLR2D	100	96.154	Ursus_maritimus
ENSELUG00000005928	polr2d	82	95.726	ENSVPAG00000007239	POLR2D	100	95.726	Vicugna_pacos
ENSELUG00000005928	polr2d	99	91.489	ENSVVUG00000008616	POLR2D	99	91.489	Vulpes_vulpes
ENSELUG00000005928	polr2d	100	88.811	ENSXETG00000002955	polr2d	100	88.811	Xenopus_tropicalis
ENSELUG00000005928	polr2d	73	98.077	ENSXCOG00000012668	polr2d	100	98.077	Xiphophorus_couchianus
ENSELUG00000005928	polr2d	73	98.077	ENSXMAG00000014031	polr2d	100	98.077	Xiphophorus_maculatus