EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000005957 (Gene tree)
Gene ID: 105013035
Gene Symbol: ern1
Alias: sb:eu1005|zgc:109932
Full Name: endoplasmic reticulum to nucleus signaling 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 30475 bases
Position: chrLG11:21153317-21183791
Accession: 105013035
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000029106	Ribonuc_2-5A	PF06479.12	9.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000011686	-	2994	XM_020051289	ENSELUP00000029106	997 (aa)	XP_019906848	-

Gene Model

Click here to download ENSELUG00000005957's gene model file

Pathways

Pathway ID	Pathway Name	Source
els04140	Autophagy - animal	KEGG
els04141	Protein processing in endoplasmic reticulum	KEGG
els04210	Apoptosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000005957's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000005957	ern1	82	60.705	ENSELUG00000009350	ern2	89	60.705

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000005957	ern1	100	77.684	ENSAPOG00000009999	ern1	96	77.663	Acanthochromis_polyacanthus
ENSELUG00000005957	ern1	94	81.772	ENSACIG00000021716	ern1	89	81.772	Amphilophus_citrinellus
ENSELUG00000005957	ern1	100	78.363	ENSAOCG00000012309	ern1	96	78.343	Amphiprion_ocellaris
ENSELUG00000005957	ern1	100	78.228	ENSAPEG00000011263	ern1	99	82.627	Amphiprion_percula
ENSELUG00000005957	ern1	98	79.143	ENSATEG00000024468	ern1	95	79.048	Anabas_testudineus
ENSELUG00000005957	ern1	93	82.635	ENSACLG00000027919	ern1	89	82.635	Astatotilapia_calliptera
ENSELUG00000005957	ern1	98	76.631	ENSAMXG00000000944	ern1	96	76.534	Astyanax_mexicanus
ENSELUG00000005957	ern1	94	80.020	ENSCSEG00000014500	ern1	94	80.020	Cynoglossus_semilaevis
ENSELUG00000005957	ern1	92	81.656	ENSCVAG00000002988	ern1	93	79.919	Cyprinodon_variegatus
ENSELUG00000005957	ern1	94	77.305	ENSDARG00000013997	ern1	100	77.472	Danio_rerio
ENSELUG00000005957	ern1	99	77.342	ENSFHEG00000005578	ern1	97	77.342	Fundulus_heteroclitus
ENSELUG00000005957	ern1	92	81.656	ENSGMOG00000011232	ern1	99	81.447	Gadus_morhua
ENSELUG00000005957	ern1	97	78.355	ENSGAFG00000020231	ern1	93	79.747	Gambusia_affinis
ENSELUG00000005957	ern1	92	83.438	ENSGACG00000011700	ern1	98	83.021	Gasterosteus_aculeatus
ENSELUG00000005957	ern1	93	82.456	ENSHBUG00000012581	ern1	88	82.538	Haplochromis_burtoni
ENSELUG00000005957	ern1	92	81.197	ENSHCOG00000016199	ern1	91	80.143	Hippocampus_comes
ENSELUG00000005957	ern1	98	76.232	ENSIPUG00000011083	ern1	98	76.039	Ictalurus_punctatus
ENSELUG00000005957	ern1	97	78.557	ENSKMAG00000019499	ern1	92	78.557	Kryptolebias_marmoratus
ENSELUG00000005957	ern1	92	79.917	ENSLBEG00000025907	ern1	88	79.709	Labrus_bergylta
ENSELUG00000005957	ern1	98	79.864	ENSMAMG00000023439	ern1	92	80.517	Mastacembelus_armatus
ENSELUG00000005957	ern1	93	82.635	ENSMZEG00005003221	ern1	89	82.635	Maylandia_zebra
ENSELUG00000005957	ern1	93	80.734	ENSMMOG00000007650	ern1	96	80.366	Mola_mola
ENSELUG00000005957	ern1	93	81.865	ENSMALG00000017775	ern1	88	81.660	Monopterus_albus
ENSELUG00000005957	ern1	98	79.146	ENSNBRG00000002179	ern1	95	79.146	Neolamprologus_brichardi
ENSELUG00000005957	ern1	92	81.470	ENSONIG00000017169	ern1	98	81.470	Oreochromis_niloticus
ENSELUG00000005957	ern1	93	80.103	ENSORLG00000008940	ern1	90	79.897	Oryzias_latipes
ENSELUG00000005957	ern1	93	79.897	ENSORLG00020018387	ern1	90	79.692	Oryzias_latipes_hni
ENSELUG00000005957	ern1	93	80.206	ENSORLG00015007946	ern1	90	80.000	Oryzias_latipes_hsok
ENSELUG00000005957	ern1	93	80.493	ENSOMEG00000011741	ern1	89	80.287	Oryzias_melastigma
ENSELUG00000005957	ern1	93	78.041	ENSPKIG00000005593	ern1	97	78.041	Paramormyrops_kingsleyae
ENSELUG00000005957	ern1	93	82.323	ENSPMGG00000020442	ern1	93	82.220	Periophthalmus_magnuspinnatus
ENSELUG00000005957	ern1	99	77.303	ENSPFOG00000007378	ern1	97	77.303	Poecilia_formosa
ENSELUG00000005957	ern1	99	77.992	ENSPLAG00000014780	ern1	97	77.992	Poecilia_latipinna
ENSELUG00000005957	ern1	99	77.303	ENSPMEG00000016324	ern1	97	77.303	Poecilia_mexicana
ENSELUG00000005957	ern1	99	77.113	ENSPREG00000006286	ern1	97	77.113	Poecilia_reticulata
ENSELUG00000005957	ern1	93	82.533	ENSPNYG00000017929	ern1	93	82.533	Pundamilia_nyererei
ENSELUG00000005957	ern1	99	75.333	ENSPNAG00000029447	ern1	99	75.526	Pygocentrus_nattereri
ENSELUG00000005957	ern1	97	78.447	ENSSMAG00000015042	ern1	93	78.252	Scophthalmus_maximus
ENSELUG00000005957	ern1	93	83.690	ENSSDUG00000009098	ern1	88	83.486	Seriola_dumerili
ENSELUG00000005957	ern1	93	83.384	ENSSLDG00000023254	ern1	88	83.180	Seriola_lalandi_dorsalis
ENSELUG00000005957	ern1	98	79.191	ENSSPAG00000017539	ern1	95	78.998	Stegastes_partitus
ENSELUG00000005957	ern1	95	78.429	ENSTRUG00000001041	ern1	95	78.529	Takifugu_rubripes
ENSELUG00000005957	ern1	92	82.341	ENSTNIG00000017990	ern1	98	82.236	Tetraodon_nigroviridis
ENSELUG00000005957	ern1	97	79.447	ENSXCOG00000010330	ern1	98	79.447	Xiphophorus_couchianus
ENSELUG00000005957	ern1	98	78.177	ENSXMAG00000001310	ern1	95	78.177	Xiphophorus_maculatus