EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000006031 (Gene tree)
Gene ID: 105023451
Gene Symbol: chd9
Alias: fb08b06|fb34c12|wu:fb08b06|wu:fb34c12
Full Name: chromodomain helicase DNA binding protein 9
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 103622 bases
Position: chrLG02:21783766-21887387
Accession: 105023451
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000004766	ResIII	PF04851.15	2.7e-06	1	1
ENSELUP00000029165	ResIII	PF04851.15	3.2e-06	1	1
ENSELUP00000029140	ResIII	PF04851.15	3.2e-06	1	1
ENSELUP00000029165	BRK	PF07533.16	3.1e-30	1	2
ENSELUP00000029165	BRK	PF07533.16	3.1e-30	2	2
ENSELUP00000029140	BRK	PF07533.16	3.1e-30	1	2
ENSELUP00000029140	BRK	PF07533.16	3.1e-30	2	2
ENSELUP00000004766	BRK	PF07533.16	3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000011588	-	11622	XM_010892657	ENSELUP00000029140	2517 (aa)	XP_010890959	-
ENSELUT00000011789	-	7470	-	ENSELUP00000004766	2489 (aa)	-	-
ENSELUT00000011532	-	11616	XM_020053587	ENSELUP00000029165	2515 (aa)	XP_019909146	-

Gene Model

Click here to download ENSELUG00000006031's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000006031's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000006031	chd9	71	66.942	ENSELUG00000012309	chd6	85	66.942
ENSELUG00000006031	chd9	69	61.045	ENSELUG00000004302	chd8	72	60.376
ENSELUG00000006031	chd9	81	66.784	ENSELUG00000024442	chd7	69	65.056

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000006031	chd9	92	74.229	ENSG00000177200	CHD9	98	67.894	Homo_sapiens
ENSELUG00000006031	chd9	99	80.008	ENSAPOG00000023034	chd9	99	79.190	Acanthochromis_polyacanthus
ENSELUG00000006031	chd9	92	74.679	ENSAMEG00000016232	CHD9	75	75.130	Ailuropoda_melanoleuca
ENSELUG00000006031	chd9	97	74.740	ENSACIG00000004097	chd9	87	76.456	Amphilophus_citrinellus
ENSELUG00000006031	chd9	99	79.359	ENSAOCG00000005487	chd9	99	78.960	Amphiprion_ocellaris
ENSELUG00000006031	chd9	99	79.359	ENSAPEG00000009859	chd9	99	78.881	Amphiprion_percula
ENSELUG00000006031	chd9	99	78.526	ENSATEG00000002748	chd9	86	79.731	Anabas_testudineus
ENSELUG00000006031	chd9	97	68.107	ENSAPLG00000002826	CHD9	74	77.083	Anas_platyrhynchos
ENSELUG00000006031	chd9	90	71.155	ENSACAG00000016150	CHD9	77	72.970	Anolis_carolinensis
ENSELUG00000006031	chd9	90	70.563	ENSANAG00000015630	CHD9	94	70.877	Aotus_nancymaae
ENSELUG00000006031	chd9	98	77.632	ENSACLG00000016899	chd9	92	78.506	Astatotilapia_calliptera
ENSELUG00000006031	chd9	99	76.401	ENSAMXG00000005652	chd9	90	77.981	Astyanax_mexicanus
ENSELUG00000006031	chd9	97	67.590	ENSBTAG00000002287	CHD9	79	73.017	Bos_taurus
ENSELUG00000006031	chd9	90	70.924	ENSCJAG00000001573	CHD9	94	71.228	Callithrix_jacchus
ENSELUG00000006031	chd9	97	67.799	ENSCAFG00000009699	CHD9	80	69.506	Canis_familiaris
ENSELUG00000006031	chd9	97	67.799	ENSCAFG00020002879	CHD9	92	71.579	Canis_lupus_dingo
ENSELUG00000006031	chd9	82	74.096	ENSCHIG00000021000	CHD9	83	67.747	Capra_hircus
ENSELUG00000006031	chd9	90	70.065	ENSTSYG00000007693	CHD9	94	71.080	Carlito_syrichta
ENSELUG00000006031	chd9	82	76.243	ENSCAPG00000011604	CHD9	72	64.384	Cavia_aperea
ENSELUG00000006031	chd9	91	69.537	ENSCPOG00000036544	CHD9	80	65.706	Cavia_porcellus
ENSELUG00000006031	chd9	97	67.603	ENSCCAG00000036178	CHD9	94	72.281	Cebus_capucinus
ENSELUG00000006031	chd9	92	74.293	ENSCATG00000036753	CHD9	94	71.678	Cercocebus_atys
ENSELUG00000006031	chd9	92	74.486	ENSCLAG00000007137	CHD9	97	80.093	Chinchilla_lanigera
ENSELUG00000006031	chd9	97	67.145	ENSCSAG00000005311	CHD9	80	69.164	Chlorocebus_sabaeus
ENSELUG00000006031	chd9	63	91.339	ENSCHOG00000003935	CHD9	53	91.146	Choloepus_hoffmanni
ENSELUG00000006031	chd9	85	80.156	ENSCPBG00000012459	CHD9	79	80.333	Chrysemys_picta_bellii
ENSELUG00000006031	chd9	97	67.145	ENSCANG00000030349	CHD9	94	71.579	Colobus_angolensis_palliatus
ENSELUG00000006031	chd9	91	74.293	ENSCGRG00001016150	Chd9	75	74.870	Cricetulus_griseus_chok1gshd
ENSELUG00000006031	chd9	91	74.293	ENSCGRG00000012850	Chd9	97	79.511	Cricetulus_griseus_crigri
ENSELUG00000006031	chd9	99	75.244	ENSCSEG00000009209	chd9	91	76.632	Cynoglossus_semilaevis
ENSELUG00000006031	chd9	95	79.032	ENSCVAG00000016195	chd9	88	79.213	Cyprinodon_variegatus
ENSELUG00000006031	chd9	99	74.645	ENSDARG00000074498	chd9	99	74.466	Danio_rerio
ENSELUG00000006031	chd9	88	70.612	ENSDNOG00000006045	CHD9	97	69.228	Dasypus_novemcinctus
ENSELUG00000006031	chd9	81	67.354	ENSDORG00000008523	-	88	76.242	Dipodomys_ordii
ENSELUG00000006031	chd9	87	90.476	ENSETEG00000009565	CHD9	72	90.476	Echinops_telfairi
ENSELUG00000006031	chd9	85	78.820	ENSEASG00005014832	CHD9	94	81.085	Equus_asinus_asinus
ENSELUG00000006031	chd9	84	74.359	ENSECAG00000011505	CHD9	75	75.130	Equus_caballus
ENSELUG00000006031	chd9	73	85.903	ENSEEUG00000014515	CHD9	68	81.768	Erinaceus_europaeus
ENSELUG00000006031	chd9	90	70.794	ENSFCAG00000022534	CHD9	94	71.930	Felis_catus
ENSELUG00000006031	chd9	99	67.506	ENSFALG00000013276	CHD9	83	75.000	Ficedula_albicollis
ENSELUG00000006031	chd9	96	68.130	ENSFDAG00000021037	CHD9	78	72.154	Fukomys_damarensis
ENSELUG00000006031	chd9	97	79.619	ENSFHEG00000006068	chd9	89	79.226	Fundulus_heteroclitus
ENSELUG00000006031	chd9	78	85.230	ENSGMOG00000006040	chd9	82	85.163	Gadus_morhua
ENSELUG00000006031	chd9	90	71.838	ENSGALG00000039178	CHD9	78	72.901	Gallus_gallus
ENSELUG00000006031	chd9	99	77.485	ENSGAFG00000010014	chd9	97	78.058	Gambusia_affinis
ENSELUG00000006031	chd9	96	76.509	ENSGACG00000016694	chd9	93	79.419	Gasterosteus_aculeatus
ENSELUG00000006031	chd9	97	67.026	ENSGGOG00000014816	CHD9	94	71.228	Gorilla_gorilla
ENSELUG00000006031	chd9	99	77.690	ENSHBUG00000023322	chd9	97	78.126	Haplochromis_burtoni
ENSELUG00000006031	chd9	90	73.960	ENSHGLG00000014938	CHD9	97	79.977	Heterocephalus_glaber_female
ENSELUG00000006031	chd9	94	79.231	ENSHCOG00000000937	chd9	85	79.180	Hippocampus_comes
ENSELUG00000006031	chd9	99	74.180	ENSIPUG00000016448	chd9	91	84.452	Ictalurus_punctatus
ENSELUG00000006031	chd9	90	71.150	ENSSTOG00000022273	CHD9	97	79.860	Ictidomys_tridecemlineatus
ENSELUG00000006031	chd9	74	71.882	ENSJJAG00000015741	-	96	69.807	Jaculus_jaculus
ENSELUG00000006031	chd9	97	77.975	ENSKMAG00000016784	chd9	99	77.316	Kryptolebias_marmoratus
ENSELUG00000006031	chd9	99	78.092	ENSLBEG00000012077	chd9	99	77.826	Labrus_bergylta
ENSELUG00000006031	chd9	96	64.469	ENSLACG00000005557	CHD9	67	77.083	Latimeria_chalumnae
ENSELUG00000006031	chd9	99	76.457	ENSLOCG00000007225	chd9	97	77.574	Lepisosteus_oculatus
ENSELUG00000006031	chd9	94	74.357	ENSLAFG00000015374	CHD9	74	74.870	Loxodonta_africana
ENSELUG00000006031	chd9	92	74.293	ENSMFAG00000041354	CHD9	94	71.579	Macaca_fascicularis
ENSELUG00000006031	chd9	92	74.293	ENSMMUG00000016310	CHD9	94	71.579	Macaca_mulatta
ENSELUG00000006031	chd9	94	74.533	ENSMNEG00000031494	CHD9	81	71.580	Macaca_nemestrina
ENSELUG00000006031	chd9	92	74.293	ENSMLEG00000043219	CHD9	94	71.579	Mandrillus_leucophaeus
ENSELUG00000006031	chd9	99	78.394	ENSMAMG00000003909	chd9	87	80.362	Mastacembelus_armatus
ENSELUG00000006031	chd9	99	78.583	ENSMZEG00005006581	chd9	97	79.398	Maylandia_zebra
ENSELUG00000006031	chd9	99	66.296	ENSMGAG00000004642	CHD9	76	67.875	Meleagris_gallopavo
ENSELUG00000006031	chd9	90	70.828	ENSMICG00000016679	CHD9	94	71.579	Microcebus_murinus
ENSELUG00000006031	chd9	90	67.526	ENSMMOG00000016406	chd9	94	65.981	Mola_mola
ENSELUG00000006031	chd9	86	61.366	ENSMODG00000013142	-	95	77.881	Monodelphis_domestica
ENSELUG00000006031	chd9	98	78.722	ENSMALG00000013306	chd9	87	80.405	Monopterus_albus
ENSELUG00000006031	chd9	91	73.650	MGP_CAROLIEiJ_G0031364	Chd9	76	74.154	Mus_caroli
ENSELUG00000006031	chd9	97	67.055	ENSMUSG00000056608	Chd9	97	78.463	Mus_musculus
ENSELUG00000006031	chd9	95	66.844	MGP_PahariEiJ_G0022964	Chd9	78	72.139	Mus_pahari
ENSELUG00000006031	chd9	97	66.934	MGP_SPRETEiJ_G0032483	Chd9	76	73.958	Mus_spretus
ENSELUG00000006031	chd9	92	74.743	ENSMPUG00000003285	CHD9	75	75.260	Mustela_putorius_furo
ENSELUG00000006031	chd9	93	74.744	ENSMLUG00000004456	CHD9	74	75.260	Myotis_lucifugus
ENSELUG00000006031	chd9	99	79.073	ENSNBRG00000009423	chd9	97	79.790	Neolamprologus_brichardi
ENSELUG00000006031	chd9	85	70.910	ENSNLEG00000001026	CHD9	81	71.561	Nomascus_leucogenys
ENSELUG00000006031	chd9	72	96.992	ENSMEUG00000008222	-	64	90.446	Notamacropus_eugenii
ENSELUG00000006031	chd9	78	96.992	ENSOPRG00000011168	CHD9	67	86.723	Ochotona_princeps
ENSELUG00000006031	chd9	92	74.245	ENSODEG00000004466	CHD9	78	71.883	Octodon_degus
ENSELUG00000006031	chd9	97	78.677	ENSONIG00000002816	chd9	98	78.199	Oreochromis_niloticus
ENSELUG00000006031	chd9	91	71.226	ENSOANG00000013401	CHD9	75	77.083	Ornithorhynchus_anatinus
ENSELUG00000006031	chd9	97	67.145	ENSOCUG00000001016	CHD9	83	74.902	Oryctolagus_cuniculus
ENSELUG00000006031	chd9	96	77.106	ENSORLG00000013810	chd9	85	78.157	Oryzias_latipes
ENSELUG00000006031	chd9	90	78.041	ENSORLG00020020665	chd9	75	81.829	Oryzias_latipes_hni
ENSELUG00000006031	chd9	96	80.392	ENSORLG00015019126	chd9	90	77.187	Oryzias_latipes_hsok
ENSELUG00000006031	chd9	65	79.761	ENSOMEG00000015978	chd9	88	79.851	Oryzias_melastigma
ENSELUG00000006031	chd9	92	69.556	ENSOGAG00000002110	CHD9	75	74.935	Otolemur_garnettii
ENSELUG00000006031	chd9	97	66.905	ENSOARG00000017664	CHD9	77	72.880	Ovis_aries
ENSELUG00000006031	chd9	97	66.760	ENSPPAG00000039388	-	97	68.085	Pan_paniscus
ENSELUG00000006031	chd9	90	70.837	ENSPPRG00000004801	CHD9	94	72.982	Panthera_pardus
ENSELUG00000006031	chd9	90	69.629	ENSPTIG00000021854	CHD9	94	62.807	Panthera_tigris_altaica
ENSELUG00000006031	chd9	92	74.165	ENSPTRG00000008113	CHD9	94	71.228	Pan_troglodytes
ENSELUG00000006031	chd9	92	74.357	ENSPANG00000019307	CHD9	98	67.893	Papio_anubis
ENSELUG00000006031	chd9	97	76.860	ENSPKIG00000021876	chd9	89	78.193	Paramormyrops_kingsleyae
ENSELUG00000006031	chd9	97	73.966	ENSPKIG00000025401	-	86	75.281	Paramormyrops_kingsleyae
ENSELUG00000006031	chd9	59	74.332	ENSPSIG00000008099	CHD9	77	75.322	Pelodiscus_sinensis
ENSELUG00000006031	chd9	80	75.275	ENSPCIG00000017215	CHD9	92	75.889	Phascolarctos_cinereus
ENSELUG00000006031	chd9	96	78.627	ENSPFOG00000015839	chd9	89	78.250	Poecilia_formosa
ENSELUG00000006031	chd9	97	78.215	ENSPLAG00000011118	chd9	99	76.754	Poecilia_latipinna
ENSELUG00000006031	chd9	93	77.209	ENSPMEG00000015106	chd9	88	77.486	Poecilia_mexicana
ENSELUG00000006031	chd9	97	78.915	ENSPREG00000006473	chd9	99	77.585	Poecilia_reticulata
ENSELUG00000006031	chd9	92	69.567	ENSPPYG00000007348	CHD9	78	71.988	Pongo_abelii
ENSELUG00000006031	chd9	73	79.436	ENSPCAG00000007564	CHD9	69	79.963	Procavia_capensis
ENSELUG00000006031	chd9	90	68.820	ENSPCOG00000028433	CHD9	94	70.877	Propithecus_coquereli
ENSELUG00000006031	chd9	94	72.755	ENSPVAG00000015617	CHD9	78	73.318	Pteropus_vampyrus
ENSELUG00000006031	chd9	99	78.898	ENSPNYG00000010947	chd9	86	79.439	Pundamilia_nyererei
ENSELUG00000006031	chd9	97	79.125	ENSPNAG00000024141	chd9	87	78.803	Pygocentrus_nattereri
ENSELUG00000006031	chd9	85	67.503	ENSRNOG00000049302	Chd9	77	77.860	Rattus_norvegicus
ENSELUG00000006031	chd9	97	67.438	ENSRBIG00000035553	CHD9	97	68.722	Rhinopithecus_bieti
ENSELUG00000006031	chd9	96	67.944	ENSRROG00000033278	CHD9	98	69.019	Rhinopithecus_roxellana
ENSELUG00000006031	chd9	90	70.519	ENSSBOG00000030240	CHD9	94	70.979	Saimiri_boliviensis_boliviensis
ENSELUG00000006031	chd9	98	67.131	ENSSHAG00000002719	CHD9	74	75.000	Sarcophilus_harrisii
ENSELUG00000006031	chd9	95	76.679	ENSSFOG00015001327	chd9	88	76.164	Scleropages_formosus
ENSELUG00000006031	chd9	97	77.239	ENSSFOG00015020209	chd9	99	76.364	Scleropages_formosus
ENSELUG00000006031	chd9	97	79.662	ENSSMAG00000008953	chd9	99	78.118	Scophthalmus_maximus
ENSELUG00000006031	chd9	99	79.509	ENSSDUG00000006139	chd9	99	79.313	Seriola_dumerili
ENSELUG00000006031	chd9	99	78.821	ENSSLDG00000017818	chd9	99	78.627	Seriola_lalandi_dorsalis
ENSELUG00000006031	chd9	75	79.531	ENSSARG00000010632	CHD9	74	76.841	Sorex_araneus
ENSELUG00000006031	chd9	99	79.016	ENSSPAG00000021649	chd9	99	78.701	Stegastes_partitus
ENSELUG00000006031	chd9	83	73.567	ENSSSCG00000033591	CHD9	77	72.648	Sus_scrofa
ENSELUG00000006031	chd9	86	71.345	ENSTGUG00000007476	CHD9	74	73.122	Taeniopygia_guttata
ENSELUG00000006031	chd9	99	75.664	ENSTRUG00000009125	chd9	93	65.469	Takifugu_rubripes
ENSELUG00000006031	chd9	76	66.895	ENSTNIG00000003825	chd9	87	84.878	Tetraodon_nigroviridis
ENSELUG00000006031	chd9	60	91.525	ENSTBEG00000016052	-	62	91.525	Tupaia_belangeri
ENSELUG00000006031	chd9	85	70.258	ENSTTRG00000012674	CHD9	73	70.575	Tursiops_truncatus
ENSELUG00000006031	chd9	75	65.855	ENSUAMG00000022706	CHD9	94	71.579	Ursus_americanus
ENSELUG00000006031	chd9	77	86.359	ENSUMAG00000004043	CHD9	95	86.407	Ursus_maritimus
ENSELUG00000006031	chd9	95	66.760	ENSVPAG00000001374	CHD9	72	77.254	Vicugna_pacos
ENSELUG00000006031	chd9	97	67.759	ENSVVUG00000019435	CHD9	80	69.465	Vulpes_vulpes
ENSELUG00000006031	chd9	96	66.829	ENSXETG00000000349	chd9	79	76.088	Xenopus_tropicalis
ENSELUG00000006031	chd9	97	77.522	ENSXCOG00000012997	chd9	96	77.378	Xiphophorus_couchianus
ENSELUG00000006031	chd9	97	78.491	ENSXMAG00000016192	chd9	96	78.695	Xiphophorus_maculatus