EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000006105 (Gene tree)
Gene ID: 105014766
Gene Symbol: rc3h2
Alias: si:ch211-243g18.1
Full Name: ring finger and CCCH-type domains 2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 20471 bases
Position: chrLG14:3007495-3027965
Accession: 105014766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000029240	zf-CCCH	PF00642.24	1.4e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000011368	-	8029	XM_013137010	ENSELUP00000029240	1094 (aa)	XP_012992464	UPI000575FB2B
ENSELUT00000011419	-	2670	-	ENSELUP00000029212	889 (aa)	-	-

Gene Model

Click here to download ENSELUG00000006105's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000006105's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000006105	rc3h2	93	57.414	ENSG00000056586	RC3H2	95	87.611	Homo_sapiens
ENSELUG00000006105	rc3h2	100	71.234	ENSAPOG00000002117	rc3h2	100	72.665	Acanthochromis_polyacanthus
ENSELUG00000006105	rc3h2	93	57.233	ENSAMEG00000006498	RC3H2	91	57.724	Ailuropoda_melanoleuca
ENSELUG00000006105	rc3h2	100	71.870	ENSAPEG00000007757	rc3h2	100	72.727	Amphiprion_percula
ENSELUG00000006105	rc3h2	100	71.184	ENSATEG00000019414	rc3h2	100	71.073	Anabas_testudineus
ENSELUG00000006105	rc3h2	93	58.749	ENSAPLG00000013920	RC3H2	91	59.058	Anas_platyrhynchos
ENSELUG00000006105	rc3h2	93	57.414	ENSANAG00000030862	RC3H2	95	87.611	Aotus_nancymaae
ENSELUG00000006105	rc3h2	100	69.676	ENSACLG00000023136	rc3h2	100	69.539	Astatotilapia_calliptera
ENSELUG00000006105	rc3h2	100	64.732	ENSAMXG00000006778	rc3h2	100	64.821	Astyanax_mexicanus
ENSELUG00000006105	rc3h2	93	57.337	ENSBTAG00000023867	RC3H2	91	57.828	Bos_taurus
ENSELUG00000006105	rc3h2	93	57.414	ENSCJAG00000020050	RC3H2	95	87.611	Callithrix_jacchus
ENSELUG00000006105	rc3h2	93	57.065	ENSCAFG00020015288	RC3H2	95	87.611	Canis_lupus_dingo
ENSELUG00000006105	rc3h2	93	57.518	ENSCHIG00000019319	RC3H2	91	58.009	Capra_hircus
ENSELUG00000006105	rc3h2	86	51.700	ENSCAPG00000017086	RC3H2	93	51.956	Cavia_aperea
ENSELUG00000006105	rc3h2	93	57.570	ENSCPOG00000008511	RC3H2	91	58.326	Cavia_porcellus
ENSELUG00000006105	rc3h2	93	57.609	ENSCCAG00000001404	RC3H2	95	87.611	Cebus_capucinus
ENSELUG00000006105	rc3h2	93	57.324	ENSCATG00000036655	RC3H2	95	87.611	Cercocebus_atys
ENSELUG00000006105	rc3h2	93	57.389	ENSCLAG00000013261	RC3H2	91	58.235	Chinchilla_lanigera
ENSELUG00000006105	rc3h2	81	54.648	ENSCSAG00000013416	RC3H2	90	55.112	Chlorocebus_sabaeus
ENSELUG00000006105	rc3h2	94	57.989	ENSCPBG00000009811	RC3H2	92	58.183	Chrysemys_picta_bellii
ENSELUG00000006105	rc3h2	93	57.414	ENSCANG00000043140	RC3H2	95	87.611	Colobus_angolensis_palliatus
ENSELUG00000006105	rc3h2	93	58.205	ENSCGRG00001010006	Rc3h2	91	58.205	Cricetulus_griseus_chok1gshd
ENSELUG00000006105	rc3h2	73	64.388	ENSCGRG00000009255	Rc3h2	77	64.388	Cricetulus_griseus_crigri
ENSELUG00000006105	rc3h2	100	69.074	ENSCSEG00000017460	rc3h2	100	69.074	Cynoglossus_semilaevis
ENSELUG00000006105	rc3h2	99	66.580	ENSCVAG00000012202	rc3h2	100	67.246	Cyprinodon_variegatus
ENSELUG00000006105	rc3h2	100	66.878	ENSDARG00000063050	rc3h2	100	67.168	Danio_rerio
ENSELUG00000006105	rc3h2	93	57.337	ENSDNOG00000014557	RC3H2	91	57.828	Dasypus_novemcinctus
ENSELUG00000006105	rc3h2	93	58.424	ENSDORG00000006398	Rc3h2	91	58.333	Dipodomys_ordii
ENSELUG00000006105	rc3h2	93	57.276	ENSEASG00005020897	RC3H2	94	83.850	Equus_asinus_asinus
ENSELUG00000006105	rc3h2	93	57.428	ENSECAG00000022176	RC3H2	91	57.919	Equus_caballus
ENSELUG00000006105	rc3h2	93	57.246	ENSFCAG00000007375	RC3H2	91	57.738	Felis_catus
ENSELUG00000006105	rc3h2	93	58.749	ENSFALG00000002011	RC3H2	91	59.149	Ficedula_albicollis
ENSELUG00000006105	rc3h2	93	57.208	ENSFDAG00000012477	RC3H2	91	57.962	Fukomys_damarensis
ENSELUG00000006105	rc3h2	99	68.221	ENSFHEG00000012272	rc3h2	100	68.571	Fundulus_heteroclitus
ENSELUG00000006105	rc3h2	69	64.803	ENSGMOG00000016709	-	99	64.512	Gadus_morhua
ENSELUG00000006105	rc3h2	93	58.514	ENSGALG00000001253	RC3H2	91	58.914	Gallus_gallus
ENSELUG00000006105	rc3h2	96	69.050	ENSGAFG00000007679	rc3h2	100	69.050	Gambusia_affinis
ENSELUG00000006105	rc3h2	75	71.698	ENSGACG00000017369	rc3h2	100	92.081	Gasterosteus_aculeatus
ENSELUG00000006105	rc3h2	94	57.810	ENSGAGG00000018295	RC3H2	98	58.662	Gopherus_agassizii
ENSELUG00000006105	rc3h2	93	57.414	ENSGGOG00000017062	RC3H2	95	87.611	Gorilla_gorilla
ENSELUG00000006105	rc3h2	100	70.482	ENSHBUG00000003976	rc3h2	100	70.345	Haplochromis_burtoni
ENSELUG00000006105	rc3h2	93	57.246	ENSHGLG00100018015	RC3H2	91	57.909	Heterocephalus_glaber_male
ENSELUG00000006105	rc3h2	100	65.606	ENSHCOG00000003006	rc3h2	100	65.520	Hippocampus_comes
ENSELUG00000006105	rc3h2	100	63.087	ENSIPUG00000021433	rc3h2	100	63.074	Ictalurus_punctatus
ENSELUG00000006105	rc3h2	93	57.389	ENSSTOG00000010655	RC3H2	91	58.062	Ictidomys_tridecemlineatus
ENSELUG00000006105	rc3h2	93	57.337	ENSJJAG00000022376	Rc3h2	91	57.962	Jaculus_jaculus
ENSELUG00000006105	rc3h2	100	69.531	ENSKMAG00000010936	rc3h2	100	69.618	Kryptolebias_marmoratus
ENSELUG00000006105	rc3h2	99	60.241	ENSLOCG00000002894	rc3h2	100	60.069	Lepisosteus_oculatus
ENSELUG00000006105	rc3h2	93	57.557	ENSLAFG00000003521	RC3H2	91	58.220	Loxodonta_africana
ENSELUG00000006105	rc3h2	90	83.333	ENSMFAG00000035621	RC3H2	95	87.611	Macaca_fascicularis
ENSELUG00000006105	rc3h2	93	57.337	ENSMMUG00000021134	RC3H2	95	87.611	Macaca_mulatta
ENSELUG00000006105	rc3h2	93	57.324	ENSMNEG00000031599	RC3H2	95	85.177	Macaca_nemestrina
ENSELUG00000006105	rc3h2	93	57.337	ENSMLEG00000033809	RC3H2	95	87.611	Mandrillus_leucophaeus
ENSELUG00000006105	rc3h2	100	70.482	ENSMZEG00005017019	rc3h2	100	70.345	Maylandia_zebra
ENSELUG00000006105	rc3h2	93	58.462	ENSMGAG00000007984	RC3H2	91	58.861	Meleagris_gallopavo
ENSELUG00000006105	rc3h2	75	61.049	ENSMAUG00000003117	Rc3h2	82	60.577	Mesocricetus_auratus
ENSELUG00000006105	rc3h2	93	57.246	ENSMICG00000003227	RC3H2	95	87.389	Microcebus_murinus
ENSELUG00000006105	rc3h2	93	57.298	ENSMOCG00000009592	Rc3h2	91	57.871	Microtus_ochrogaster
ENSELUG00000006105	rc3h2	84	92.650	ENSMMOG00000021305	rc3h2	97	92.650	Mola_mola
ENSELUG00000006105	rc3h2	93	57.246	ENSMODG00000019725	RC3H2	76	57.818	Monodelphis_domestica
ENSELUG00000006105	rc3h2	93	57.875	MGP_CAROLIEiJ_G0023516	Rc3h2	95	87.389	Mus_caroli
ENSELUG00000006105	rc3h2	93	57.298	ENSMUSG00000075376	Rc3h2	95	87.389	Mus_musculus
ENSELUG00000006105	rc3h2	93	57.376	MGP_PahariEiJ_G0024969	Rc3h2	95	87.389	Mus_pahari
ENSELUG00000006105	rc3h2	93	57.298	MGP_SPRETEiJ_G0024436	Rc3h2	95	87.389	Mus_spretus
ENSELUG00000006105	rc3h2	93	57.065	ENSMPUG00000014141	RC3H2	91	57.545	Mustela_putorius_furo
ENSELUG00000006105	rc3h2	93	58.190	ENSMLUG00000013992	RC3H2	91	58.492	Myotis_lucifugus
ENSELUG00000006105	rc3h2	100	70.482	ENSNBRG00000009276	rc3h2	100	70.345	Neolamprologus_brichardi
ENSELUG00000006105	rc3h2	93	56.962	ENSNLEG00000017204	RC3H2	95	87.611	Nomascus_leucogenys
ENSELUG00000006105	rc3h2	55	87.352	ENSMEUG00000001299	-	54	87.352	Notamacropus_eugenii
ENSELUG00000006105	rc3h2	78	57.250	ENSOPRG00000000135	RC3H2	88	58.113	Ochotona_princeps
ENSELUG00000006105	rc3h2	100	69.761	ENSONIG00000003945	rc3h2	100	69.625	Oreochromis_niloticus
ENSELUG00000006105	rc3h2	92	58.539	ENSOANG00000008194	RC3H2	99	58.586	Ornithorhynchus_anatinus
ENSELUG00000006105	rc3h2	93	57.389	ENSOCUG00000008804	RC3H2	91	57.880	Oryctolagus_cuniculus
ENSELUG00000006105	rc3h2	100	68.217	ENSORLG00000010018	rc3h2	100	68.131	Oryzias_latipes
ENSELUG00000006105	rc3h2	100	68.217	ENSORLG00020013257	rc3h2	100	67.959	Oryzias_latipes_hni
ENSELUG00000006105	rc3h2	100	68.131	ENSORLG00015001525	rc3h2	100	68.045	Oryzias_latipes_hsok
ENSELUG00000006105	rc3h2	100	68.299	ENSOMEG00000023540	rc3h2	100	68.127	Oryzias_melastigma
ENSELUG00000006105	rc3h2	93	57.401	ENSOGAG00000010678	RC3H2	91	57.814	Otolemur_garnettii
ENSELUG00000006105	rc3h2	93	57.414	ENSOARG00000013965	RC3H2	91	57.904	Ovis_aries
ENSELUG00000006105	rc3h2	93	57.324	ENSPPAG00000036013	RC3H2	95	87.389	Pan_paniscus
ENSELUG00000006105	rc3h2	93	57.233	ENSPPRG00000008698	RC3H2	94	60.648	Panthera_pardus
ENSELUG00000006105	rc3h2	93	57.233	ENSPTIG00000014257	RC3H2	94	60.648	Panthera_tigris_altaica
ENSELUG00000006105	rc3h2	93	57.324	ENSPTRG00000021339	RC3H2	95	87.389	Pan_troglodytes
ENSELUG00000006105	rc3h2	93	55.877	ENSPANG00000025840	RC3H2	94	84.071	Papio_anubis
ENSELUG00000006105	rc3h2	99	70.287	ENSPKIG00000021910	rc3h2	96	70.036	Paramormyrops_kingsleyae
ENSELUG00000006105	rc3h2	94	58.073	ENSPSIG00000005393	RC3H2	92	58.333	Pelodiscus_sinensis
ENSELUG00000006105	rc3h2	84	91.176	ENSPMGG00000023963	rc3h2	94	91.648	Periophthalmus_magnuspinnatus
ENSELUG00000006105	rc3h2	93	57.169	ENSPEMG00000023441	Rc3h2	91	57.685	Peromyscus_maniculatus_bairdii
ENSELUG00000006105	rc3h2	89	84.797	ENSPCIG00000025559	RC3H2	90	88.009	Phascolarctos_cinereus
ENSELUG00000006105	rc3h2	98	67.618	ENSPFOG00000019699	rc3h2	99	69.703	Poecilia_formosa
ENSELUG00000006105	rc3h2	94	63.394	ENSPLAG00000005799	rc3h2	98	62.931	Poecilia_latipinna
ENSELUG00000006105	rc3h2	98	68.089	ENSPMEG00000014187	rc3h2	98	68.267	Poecilia_mexicana
ENSELUG00000006105	rc3h2	99	67.798	ENSPREG00000008979	rc3h2	100	67.972	Poecilia_reticulata
ENSELUG00000006105	rc3h2	79	74.704	ENSPCAG00000010154	RC3H2	77	74.704	Procavia_capensis
ENSELUG00000006105	rc3h2	100	69.702	ENSPNYG00000012063	rc3h2	100	69.565	Pundamilia_nyererei
ENSELUG00000006105	rc3h2	100	66.637	ENSPNAG00000017502	rc3h2	100	66.007	Pygocentrus_nattereri
ENSELUG00000006105	rc3h2	93	57.246	ENSRNOG00000009196	Rc3h2	94	57.866	Rattus_norvegicus
ENSELUG00000006105	rc3h2	93	57.699	ENSRBIG00000032579	RC3H2	95	87.611	Rhinopithecus_bieti
ENSELUG00000006105	rc3h2	93	57.518	ENSRROG00000043784	RC3H2	95	87.611	Rhinopithecus_roxellana
ENSELUG00000006105	rc3h2	93	57.543	ENSSBOG00000029100	RC3H2	95	87.611	Saimiri_boliviensis_boliviensis
ENSELUG00000006105	rc3h2	93	57.724	ENSSHAG00000007498	RC3H2	91	57.713	Sarcophilus_harrisii
ENSELUG00000006105	rc3h2	100	68.889	ENSSMAG00000020048	rc3h2	100	69.684	Scophthalmus_maximus
ENSELUG00000006105	rc3h2	100	72.541	ENSSDUG00000016022	rc3h2	100	72.455	Seriola_dumerili
ENSELUG00000006105	rc3h2	100	72.626	ENSSLDG00000016070	rc3h2	100	72.455	Seriola_lalandi_dorsalis
ENSELUG00000006105	rc3h2	93	57.685	ENSSARG00000012329	RC3H2	91	58.175	Sorex_araneus
ENSELUG00000006105	rc3h2	93	58.364	ENSSPUG00000001457	RC3H2	91	58.455	Sphenodon_punctatus
ENSELUG00000006105	rc3h2	100	72.113	ENSSPAG00000005233	rc3h2	100	72.541	Stegastes_partitus
ENSELUG00000006105	rc3h2	93	57.285	ENSSSCG00000005575	RC3H2	93	87.389	Sus_scrofa
ENSELUG00000006105	rc3h2	93	58.492	ENSTGUG00000006889	-	91	58.893	Taeniopygia_guttata
ENSELUG00000006105	rc3h2	86	67.382	ENSTNIG00000004942	rc3h2	98	67.045	Tetraodon_nigroviridis
ENSELUG00000006105	rc3h2	72	63.057	ENSTBEG00000009622	RC3H2	78	63.482	Tupaia_belangeri
ENSELUG00000006105	rc3h2	87	66.404	ENSTTRG00000016954	RC3H2	84	67.104	Tursiops_truncatus
ENSELUG00000006105	rc3h2	93	57.156	ENSUAMG00000015355	RC3H2	91	57.647	Ursus_americanus
ENSELUG00000006105	rc3h2	93	57.156	ENSUMAG00000003161	RC3H2	95	87.611	Ursus_maritimus
ENSELUG00000006105	rc3h2	93	57.595	ENSVPAG00000005994	RC3H2	91	58.085	Vicugna_pacos
ENSELUG00000006105	rc3h2	93	57.065	ENSVVUG00000009519	RC3H2	94	57.636	Vulpes_vulpes
ENSELUG00000006105	rc3h2	99	64.621	ENSXCOG00000005002	rc3h2	96	90.889	Xiphophorus_couchianus
ENSELUG00000006105	rc3h2	99	68.288	ENSXMAG00000001724	rc3h2	100	68.430	Xiphophorus_maculatus