EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000006136 (Gene tree)
Gene ID
-
Gene Symbol
RPA1 (1 of many)
Alias
HSSB|REPA1|RF-A|RP-A|RPA70
Full Name
replication protein A 70 kDa DNA-binding subunit
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Plus strand
Length
53469 bases
Position
chrLG07:38956156-39009624
Accession
105028498
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000029262tRNA_anti-codonPF01336.251.2e-1211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000011301RPA1 (1 of many)-2011518XM_010901270ENSELUP00000029262505 (aa)XP_010899572-
Gene Model
Click here to download ENSELUG00000006136's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000006136's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000006136RPA19963.178ENSELUG00000021071rpa18863.178
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000006136RPA19962.689ENSAPOG00000011658rpa19362.689Acanthochromis_polyacanthus
ENSELUG00000006136RPA19272.662ENSAPOG00000019409RPA16072.662Acanthochromis_polyacanthus
ENSELUG00000006136RPA19956.618ENSAMEG00000007706RPA18856.985Ailuropoda_melanoleuca
ENSELUG00000006136RPA19964.457ENSACIG00000012881RPA19264.457Amphilophus_citrinellus
ENSELUG00000006136RPA19954.376ENSACIG00000007277rpa19154.376Amphilophus_citrinellus
ENSELUG00000006136RPA19472.182ENSAOCG00000009003RPA16472.182Amphiprion_ocellaris
ENSELUG00000006136RPA110062.030ENSAOCG00000023376rpa19362.030Amphiprion_ocellaris
ENSELUG00000006136RPA19472.902ENSAPEG00000019132RPA16372.902Amphiprion_percula
ENSELUG00000006136RPA110062.594ENSAPEG00000008634rpa19362.594Amphiprion_percula
ENSELUG00000006136RPA19675.779ENSATEG00000006443RPA17575.779Anabas_testudineus
ENSELUG00000006136RPA19962.477ENSATEG00000022024rpa19362.477Anabas_testudineus
ENSELUG00000006136RPA19948.232ENSAPLG00000012442RPA19148.232Anas_platyrhynchos
ENSELUG00000006136RPA19955.513ENSACAG00000014490RPA18755.323Anolis_carolinensis
ENSELUG00000006136RPA19960.425ENSANAG00000023456RPA19060.117Aotus_nancymaae
ENSELUG00000006136RPA19974.101ENSACLG00000005223RPA18374.101Astatotilapia_calliptera
ENSELUG00000006136RPA19964.972ENSACLG00000006640rpa19464.972Astatotilapia_calliptera
ENSELUG00000006136RPA19965.286ENSAMXG00000008418rpa19165.286Astyanax_mexicanus
ENSELUG00000006136RPA19955.331ENSBTAG00000009711RPA18855.331Bos_taurus
ENSELUG00000006136RPA18130.361WBGene00017546rpa-16230.361Caenorhabditis_elegans
ENSELUG00000006136RPA19956.697ENSCJAG00000001848RPA18857.248Callithrix_jacchus
ENSELUG00000006136RPA19955.801ENSCAFG00000019249RPA18856.354Canis_familiaris
ENSELUG00000006136RPA19955.801ENSCAFG00020009847RPA18856.354Canis_lupus_dingo
ENSELUG00000006136RPA19955.147ENSCHIG00000026308RPA18855.147Capra_hircus
ENSELUG00000006136RPA19956.250ENSTSYG00000003482-8856.250Carlito_syrichta
ENSELUG00000006136RPA19956.514ENSCPOG00000000035RPA18856.514Cavia_porcellus
ENSELUG00000006136RPA19947.619ENSCCAG00000010981RPA18748.168Cebus_capucinus
ENSELUG00000006136RPA19956.697ENSCLAG00000005185-8856.697Chinchilla_lanigera
ENSELUG00000006136RPA19953.309ENSCLAG00000015045-8853.309Chinchilla_lanigera
ENSELUG00000006136RPA19947.882ENSCSAG00000013833RPA18647.882Chlorocebus_sabaeus
ENSELUG00000006136RPA18365.238ENSCHOG00000009454-9665.238Choloepus_hoffmanni
ENSELUG00000006136RPA19657.634ENSCHOG00000013540-8757.700Choloepus_hoffmanni
ENSELUG00000006136RPA110057.587ENSCPBG00000020377RPA19557.847Chrysemys_picta_bellii
ENSELUG00000006136RPA19541.440ENSCING00000023482-6946.539Ciona_intestinalis
ENSELUG00000006136RPA19961.328ENSCANG00000030911RPA18961.328Colobus_angolensis_palliatus
ENSELUG00000006136RPA19957.117ENSCGRG00001008197Rpa18857.117Cricetulus_griseus_chok1gshd
ENSELUG00000006136RPA18265.707ENSCGRG00000000582Rpa18265.707Cricetulus_griseus_crigri
ENSELUG00000006136RPA19960.878ENSCSEG00000013066rpa18960.878Cynoglossus_semilaevis
ENSELUG00000006136RPA19956.093ENSCSEG00000012726RPA17167.386Cynoglossus_semilaevis
ENSELUG00000006136RPA19962.430ENSCVAG00000019431rpa19562.313Cyprinodon_variegatus
ENSELUG00000006136RPA19571.827ENSCVAG00000013446-6671.827Cyprinodon_variegatus
ENSELUG00000006136RPA19962.147ENSDARG00000003938rpa18862.147Danio_rerio
ENSELUG00000006136RPA19957.721ENSDNOG00000017218RPA18857.721Dasypus_novemcinctus
ENSELUG00000006136RPA19956.722ENSDORG00000006199Rpa18956.673Dipodomys_ordii
ENSELUG00000006136RPA19939.513FBgn0010173RpA-708739.888Drosophila_melanogaster
ENSELUG00000006136RPA17964.286ENSETEG00000017608RPA15165.596Echinops_telfairi
ENSELUG00000006136RPA19959.375ENSEASG00005009372RPA19359.459Equus_asinus_asinus
ENSELUG00000006136RPA19955.985ENSECAG00000023886RPA18856.169Equus_caballus
ENSELUG00000006136RPA18266.268ENSEEUG00000002186-6866.268Erinaceus_europaeus
ENSELUG00000006136RPA19956.250ENSFCAG00000006306RPA18856.250Felis_catus
ENSELUG00000006136RPA19956.642ENSFALG00000006575RPA18856.642Ficedula_albicollis
ENSELUG00000006136RPA19956.514ENSFDAG00000007720RPA18856.514Fukomys_damarensis
ENSELUG00000006136RPA19963.060ENSFHEG00000003580rpa18863.060Fundulus_heteroclitus
ENSELUG00000006136RPA19965.020ENSGMOG00000010382rpa18863.743Gadus_morhua
ENSELUG00000006136RPA19956.747ENSGALG00000003072RPA18856.747Gallus_gallus
ENSELUG00000006136RPA19961.887ENSGAFG00000012916rpa18961.887Gambusia_affinis
ENSELUG00000006136RPA19370.983ENSGAFG00000020953RPA16470.983Gambusia_affinis
ENSELUG00000006136RPA19961.626ENSGACG00000010856rpa18861.626Gasterosteus_aculeatus
ENSELUG00000006136RPA19957.431ENSGAGG00000013611RPA18857.431Gopherus_agassizii
ENSELUG00000006136RPA19960.156ENSGGOG00000014186RPA18760.156Gorilla_gorilla
ENSELUG00000006136RPA19965.160ENSHBUG00000017773rpa18865.160Haplochromis_burtoni
ENSELUG00000006136RPA19957.895ENSHBUG00000009348RPA19057.895Haplochromis_burtoni
ENSELUG00000006136RPA19956.514ENSHGLG00000008846RPA18856.514Heterocephalus_glaber_female
ENSELUG00000006136RPA19952.593ENSHGLG00100000799-8952.593Heterocephalus_glaber_male
ENSELUG00000006136RPA19956.514ENSHGLG00100017755-8856.514Heterocephalus_glaber_male
ENSELUG00000006136RPA19648.462ENSHGLG00100002005-6756.341Heterocephalus_glaber_male
ENSELUG00000006136RPA19958.410ENSHCOG00000001401rpa18859.150Hippocampus_comes
ENSELUG00000006136RPA19949.209ENSHCOG00000000351RPA18748.425Hippocampus_comes
ENSELUG00000006136RPA19961.940ENSIPUG00000004400rpa18861.940Ictalurus_punctatus
ENSELUG00000006136RPA19955.147ENSSTOG00000022475RPA19155.147Ictidomys_tridecemlineatus
ENSELUG00000006136RPA19956.514ENSJJAG00000000876Rpa19156.514Jaculus_jaculus
ENSELUG00000006136RPA19959.124ENSKMAG00000005605rpa18859.963Kryptolebias_marmoratus
ENSELUG00000006136RPA19962.384ENSKMAG00000000234RPA18862.384Kryptolebias_marmoratus
ENSELUG00000006136RPA19963.137ENSLBEG00000021604rpa18863.137Labrus_bergylta
ENSELUG00000006136RPA19272.902ENSLBEG00000002281RPA16272.902Labrus_bergylta
ENSELUG00000006136RPA18361.374ENSLACG00000007210RPA18561.374Latimeria_chalumnae
ENSELUG00000006136RPA19959.586ENSLOCG00000006397rpa18859.586Lepisosteus_oculatus
ENSELUG00000006136RPA19954.809ENSLAFG00000015354RPA18854.809Loxodonta_africana
ENSELUG00000006136RPA18054.382ENSMFAG00000036138-8854.382Macaca_fascicularis
ENSELUG00000006136RPA19956.642ENSMMUG00000011604-8956.642Macaca_mulatta
ENSELUG00000006136RPA19654.335ENSMMUG00000002442-8554.438Macaca_mulatta
ENSELUG00000006136RPA18361.137ENSMNEG00000029837-7761.137Macaca_nemestrina
ENSELUG00000006136RPA19957.143ENSMNEG00000031632-9057.143Macaca_nemestrina
ENSELUG00000006136RPA19953.394ENSMLEG00000038768-6963.246Mandrillus_leucophaeus
ENSELUG00000006136RPA19972.662ENSMAMG00000020097RPA17572.662Mastacembelus_armatus
ENSELUG00000006136RPA19964.522ENSMAMG00000017993rpa19364.522Mastacembelus_armatus
ENSELUG00000006136RPA19974.101ENSMZEG00005024731RPA18374.101Maylandia_zebra
ENSELUG00000006136RPA19964.098ENSMZEG00005007551rpa19462.983Maylandia_zebra
ENSELUG00000006136RPA19956.192ENSMGAG00000005315RPA18856.192Meleagris_gallopavo
ENSELUG00000006136RPA19957.459ENSMAUG00000010474Rpa19057.459Mesocricetus_auratus
ENSELUG00000006136RPA19955.455ENSMICG00000012867RPA18856.538Microcebus_murinus
ENSELUG00000006136RPA19956.354ENSMOCG00000013019Rpa18856.354Microtus_ochrogaster
ENSELUG00000006136RPA19967.400ENSMMOG00000010868RPA18667.400Mola_mola
ENSELUG00000006136RPA19962.082ENSMMOG00000014292rpa19162.082Mola_mola
ENSELUG00000006136RPA19955.780ENSMODG00000010549RPA18755.780Monodelphis_domestica
ENSELUG00000006136RPA19570.983ENSMALG00000001208RPA15970.983Monopterus_albus
ENSELUG00000006136RPA19961.860ENSMALG00000011453rpa18861.860Monopterus_albus
ENSELUG00000006136RPA19957.326MGP_CAROLIEiJ_G0016734Rpa18857.326Mus_caroli
ENSELUG00000006136RPA19957.246ENSMUSG00000000751Rpa18857.246Mus_musculus
ENSELUG00000006136RPA19957.377MGP_PahariEiJ_G0017871Rpa18857.377Mus_pahari
ENSELUG00000006136RPA19957.143MGP_SPRETEiJ_G0017577Rpa18856.600Mus_spretus
ENSELUG00000006136RPA19956.169ENSMPUG00000013119RPA18856.169Mustela_putorius_furo
ENSELUG00000006136RPA19955.351ENSMLUG00000006113RPA18755.351Myotis_lucifugus
ENSELUG00000006136RPA110057.143ENSNGAG00000004522Rpa18757.143Nannospalax_galili
ENSELUG00000006136RPA19964.595ENSNBRG00000020595rpa19364.595Neolamprologus_brichardi
ENSELUG00000006136RPA19959.701ENSNBRG00000009672RPA18659.701Neolamprologus_brichardi
ENSELUG00000006136RPA19956.906ENSNLEG00000017149RPA18857.459Nomascus_leucogenys
ENSELUG00000006136RPA19949.908ENSMEUG00000006714RPA18949.908Notamacropus_eugenii
ENSELUG00000006136RPA19955.776ENSODEG00000009038RPA18955.776Octodon_degus
ENSELUG00000006136RPA19963.419ENSONIG00000013135rpa18863.419Oreochromis_niloticus
ENSELUG00000006136RPA19955.617ENSOANG00000010880RPA18955.617Ornithorhynchus_anatinus
ENSELUG00000006136RPA19954.211ENSOCUG00000001504RPA18854.211Oryctolagus_cuniculus
ENSELUG00000006136RPA110062.524ENSORLG00000004856rpa18862.524Oryzias_latipes
ENSELUG00000006136RPA19271.942ENSORLG00000003368RPA16471.942Oryzias_latipes
ENSELUG00000006136RPA110062.712ENSORLG00020008980rpa18862.712Oryzias_latipes_hni
ENSELUG00000006136RPA19271.223ENSORLG00020015284RPA16371.223Oryzias_latipes_hni
ENSELUG00000006136RPA17671.948ENSORLG00015005867-8871.948Oryzias_latipes_hsok
ENSELUG00000006136RPA19271.703ENSORLG00015020383RPA16571.703Oryzias_latipes_hsok
ENSELUG00000006136RPA110062.712ENSORLG00015013982rpa18862.712Oryzias_latipes_hsok
ENSELUG00000006136RPA19959.108ENSOMEG00000011040RPA19259.108Oryzias_melastigma
ENSELUG00000006136RPA110061.466ENSOMEG00000004704rpa18861.466Oryzias_melastigma
ENSELUG00000006136RPA19957.274ENSOGAG00000005581-8857.274Otolemur_garnettii
ENSELUG00000006136RPA17263.830ENSOGAG00000029379-8463.830Otolemur_garnettii
ENSELUG00000006136RPA19955.147ENSOARG00000014479RPA18855.147Ovis_aries
ENSELUG00000006136RPA19956.906ENSPPAG00000039680RPA18856.906Pan_paniscus
ENSELUG00000006136RPA19956.434ENSPPRG00000011807RPA18856.250Panthera_pardus
ENSELUG00000006136RPA19956.250ENSPTIG00000007898RPA18856.250Panthera_tigris_altaica
ENSELUG00000006136RPA19956.722ENSPTRG00000008539RPA18856.722Pan_troglodytes
ENSELUG00000006136RPA19956.827ENSPANG00000024592RPA18856.827Papio_anubis
ENSELUG00000006136RPA19363.548ENSPKIG00000008053rpa18363.938Paramormyrops_kingsleyae
ENSELUG00000006136RPA110057.404ENSPSIG00000015617RPA19057.404Pelodiscus_sinensis
ENSELUG00000006136RPA19964.093ENSPMGG00000011589rpa19064.093Periophthalmus_magnuspinnatus
ENSELUG00000006136RPA19965.625ENSPMGG00000000543RPA19563.826Periophthalmus_magnuspinnatus
ENSELUG00000006136RPA19956.538ENSPEMG00000021061Rpa18856.538Peromyscus_maniculatus_bairdii
ENSELUG00000006136RPA19955.676ENSPCIG00000019049RPA18855.676Phascolarctos_cinereus
ENSELUG00000006136RPA19961.338ENSPFOG00000003987rpa18861.338Poecilia_formosa
ENSELUG00000006136RPA19171.948ENSPLAG00000008844-6071.948Poecilia_latipinna
ENSELUG00000006136RPA19961.959ENSPLAG00000004984rpa18861.959Poecilia_latipinna
ENSELUG00000006136RPA19961.368ENSPMEG00000020602rpa19561.368Poecilia_mexicana
ENSELUG00000006136RPA17771.649ENSPMEG00000003627-6171.649Poecilia_mexicana
ENSELUG00000006136RPA19553.906ENSPREG00000010174rpa18553.906Poecilia_reticulata
ENSELUG00000006136RPA18371.942ENSPREG00000010119RPA16271.942Poecilia_reticulata
ENSELUG00000006136RPA19956.538ENSPCOG00000001799RPA18856.538Propithecus_coquereli
ENSELUG00000006136RPA19954.512ENSPVAG00000002149RPA18854.512Pteropus_vampyrus
ENSELUG00000006136RPA19964.972ENSPNYG00000016316rpa19464.972Pundamilia_nyererei
ENSELUG00000006136RPA19973.861ENSPNYG00000024165RPA18373.861Pundamilia_nyererei
ENSELUG00000006136RPA19956.554ENSPNAG00000008599rpa19056.611Pygocentrus_nattereri
ENSELUG00000006136RPA19962.621ENSRNOG00000003123Rpa18858.195Rattus_norvegicus
ENSELUG00000006136RPA19957.011ENSRBIG00000036587RPA18857.011Rhinopithecus_bieti
ENSELUG00000006136RPA19951.845ENSRROG00000043278RPA18752.583Rhinopithecus_roxellana
ENSELUG00000006136RPA18234.204YAR007CRFA16834.204Saccharomyces_cerevisiae
ENSELUG00000006136RPA19956.881ENSSBOG00000030233RPA19457.431Saimiri_boliviensis_boliviensis
ENSELUG00000006136RPA19956.058ENSSHAG00000007969RPA18756.058Sarcophilus_harrisii
ENSELUG00000006136RPA19965.974ENSSFOG00015005362rpa18165.974Scleropages_formosus
ENSELUG00000006136RPA19273.861ENSSMAG00000019746RPA16373.861Scophthalmus_maximus
ENSELUG00000006136RPA19274.820ENSSDUG00000016358RPA16874.820Seriola_dumerili
ENSELUG00000006136RPA19964.729ENSSDUG00000011949rpa18864.729Seriola_dumerili
ENSELUG00000006136RPA19964.162ENSSLDG00000011806rpa18864.162Seriola_lalandi_dorsalis
ENSELUG00000006136RPA19273.861ENSSLDG00000020784RPA17273.861Seriola_lalandi_dorsalis
ENSELUG00000006136RPA18671.875ENSSARG00000007506RPA17871.875Sorex_araneus
ENSELUG00000006136RPA19954.444ENSSPUG00000007223RPA19054.444Sphenodon_punctatus
ENSELUG00000006136RPA19965.019ENSSPAG00000011165RPA18964.962Stegastes_partitus
ENSELUG00000006136RPA19962.147ENSSPAG00000009903rpa18862.147Stegastes_partitus
ENSELUG00000006136RPA19960.547ENSSSCG00000017822RPA18760.547Sus_scrofa
ENSELUG00000006136RPA19956.401ENSTGUG00000005775RPA18856.401Taeniopygia_guttata
ENSELUG00000006136RPA19272.837ENSTRUG00000000405RPA15872.837Takifugu_rubripes
ENSELUG00000006136RPA19961.509ENSTRUG00000003616rpa18861.509Takifugu_rubripes
ENSELUG00000006136RPA19960.773ENSTNIG00000016199rpa18860.773Tetraodon_nigroviridis
ENSELUG00000006136RPA18266.507ENSTBEG00000002709RPA17066.507Tupaia_belangeri
ENSELUG00000006136RPA19956.089ENSTTRG00000001169RPA18856.089Tursiops_truncatus
ENSELUG00000006136RPA18880.769ENSUAMG00000015676RPA18780.769Ursus_americanus
ENSELUG00000006136RPA19959.961ENSUMAG00000009328RPA18759.961Ursus_maritimus
ENSELUG00000006136RPA19954.982ENSVPAG00000009443RPA18854.982Vicugna_pacos
ENSELUG00000006136RPA19955.801ENSVVUG00000021715RPA18856.354Vulpes_vulpes
ENSELUG00000006136RPA19957.728ENSXETG00000013538rpa18857.728Xenopus_tropicalis
ENSELUG00000006136RPA19962.500ENSXCOG00000009899-9261.776Xiphophorus_couchianus
ENSELUG00000006136RPA19559.491ENSXCOG00000010068rpa18759.259Xiphophorus_couchianus
ENSELUG00000006136RPA19959.851ENSXMAG00000004102rpa19559.851Xiphophorus_maculatus
ENSELUG00000006136RPA19270.983ENSXMAG00000010333RPA16070.983Xiphophorus_maculatus

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