EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000006159 (Gene tree)
Gene ID: 105028217
Gene Symbol: sall1a
Alias: cb896|id:ibd5077|sall1|sb:eu809|spa1a|spalt1a
Full Name: spalt like transcription factor 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 72786 bases
Position: chrLG02:21149233-21222018
Accession: 105028217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000005092	zf-C2H2	PF00096.26	1.3e-34	1	6
ENSELUP00000005092	zf-C2H2	PF00096.26	1.3e-34	2	6
ENSELUP00000005092	zf-C2H2	PF00096.26	1.3e-34	3	6
ENSELUP00000005092	zf-C2H2	PF00096.26	1.3e-34	4	6
ENSELUP00000005092	zf-C2H2	PF00096.26	1.3e-34	5	6
ENSELUP00000005092	zf-C2H2	PF00096.26	1.3e-34	6	6
ENSELUP00000005082	zf-C2H2	PF00096.26	1.5e-32	1	6
ENSELUP00000005082	zf-C2H2	PF00096.26	1.5e-32	2	6
ENSELUP00000005082	zf-C2H2	PF00096.26	1.5e-32	3	6
ENSELUP00000005082	zf-C2H2	PF00096.26	1.5e-32	4	6
ENSELUP00000005082	zf-C2H2	PF00096.26	1.5e-32	5	6
ENSELUP00000005082	zf-C2H2	PF00096.26	1.5e-32	6	6
ENSELUP00000029281	zf-C2H2	PF00096.26	1.8e-32	1	6
ENSELUP00000029281	zf-C2H2	PF00096.26	1.8e-32	2	6
ENSELUP00000029281	zf-C2H2	PF00096.26	1.8e-32	3	6
ENSELUP00000029281	zf-C2H2	PF00096.26	1.8e-32	4	6
ENSELUP00000029281	zf-C2H2	PF00096.26	1.8e-32	5	6
ENSELUP00000029281	zf-C2H2	PF00096.26	1.8e-32	6	6
ENSELUP00000005092	zf-met	PF12874.7	2e-25	1	5
ENSELUP00000005092	zf-met	PF12874.7	2e-25	2	5
ENSELUP00000005092	zf-met	PF12874.7	2e-25	3	5
ENSELUP00000005092	zf-met	PF12874.7	2e-25	4	5
ENSELUP00000005092	zf-met	PF12874.7	2e-25	5	5
ENSELUP00000005082	zf-met	PF12874.7	2.6e-25	1	5
ENSELUP00000005082	zf-met	PF12874.7	2.6e-25	2	5
ENSELUP00000005082	zf-met	PF12874.7	2.6e-25	3	5
ENSELUP00000005082	zf-met	PF12874.7	2.6e-25	4	5
ENSELUP00000005082	zf-met	PF12874.7	2.6e-25	5	5
ENSELUP00000029281	zf-met	PF12874.7	2.7e-25	1	5
ENSELUP00000029281	zf-met	PF12874.7	2.7e-25	2	5
ENSELUP00000029281	zf-met	PF12874.7	2.7e-25	3	5
ENSELUP00000029281	zf-met	PF12874.7	2.7e-25	4	5
ENSELUP00000029281	zf-met	PF12874.7	2.7e-25	5	5

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000011270	-	5962	XM_020056747	ENSELUP00000005082	1368 (aa)	XP_019912306	UPI00097333C2
ENSELUT00000011257	-	6695	XM_020056742	ENSELUP00000029281	1390 (aa)	XP_019912301	UPI0009734623
ENSELUT00000011244	-	6234	-	ENSELUP00000005092	1293 (aa)	-	-

Gene Model

Click here to download ENSELUG00000006159's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000006159's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000006159	sall1a	100	52.294	ENSELUG00000017774	-	100	51.562
ENSELUG00000006159	sall1a	62	67.308	ENSELUG00000005696	sall4	66	67.308
ENSELUG00000006159	sall1a	100	63.462	ENSELUG00000009541	sall3b	69	63.462
ENSELUG00000006159	sall1a	97	63.462	ENSELUG00000020351	sall3a	94	63.462

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000006159	sall1a	99	66.618	ENSG00000103449	SALL1	100	66.501	Homo_sapiens
ENSELUG00000006159	sall1a	100	78.607	ENSAPOG00000022764	sall1a	100	78.536	Acanthochromis_polyacanthus
ENSELUG00000006159	sall1a	100	65.605	ENSAMEG00000006817	SALL1	100	66.075	Ailuropoda_melanoleuca
ENSELUG00000006159	sall1a	100	77.028	ENSACIG00000004231	sall1a	100	77.243	Amphilophus_citrinellus
ENSELUG00000006159	sall1a	100	78.751	ENSAOCG00000002800	sall1a	100	78.679	Amphiprion_ocellaris
ENSELUG00000006159	sall1a	100	78.464	ENSAPEG00000010179	sall1a	100	78.392	Amphiprion_percula
ENSELUG00000006159	sall1a	99	78.073	ENSATEG00000003006	sall1a	100	77.658	Anabas_testudineus
ENSELUG00000006159	sall1a	100	67.641	ENSAPLG00000003356	SALL1	100	67.664	Anas_platyrhynchos
ENSELUG00000006159	sall1a	99	65.334	ENSACAG00000014399	SALL1	95	65.334	Anolis_carolinensis
ENSELUG00000006159	sall1a	99	66.400	ENSANAG00000027238	SALL1	100	66.572	Aotus_nancymaae
ENSELUG00000006159	sall1a	100	77.067	ENSACLG00000017148	sall1a	100	76.995	Astatotilapia_calliptera
ENSELUG00000006159	sall1a	99	50.389	ENSAMXG00000017702	sall1b	99	50.631	Astyanax_mexicanus
ENSELUG00000006159	sall1a	100	76.774	ENSAMXG00000018599	sall1a	100	76.631	Astyanax_mexicanus
ENSELUG00000006159	sall1a	100	65.260	ENSBTAG00000008544	SALL1	100	65.116	Bos_taurus
ENSELUG00000006159	sall1a	99	66.618	ENSCJAG00000001740	SALL1	100	66.785	Callithrix_jacchus
ENSELUG00000006159	sall1a	99	66.035	ENSCAFG00000009755	SALL1	100	65.700	Canis_familiaris
ENSELUG00000006159	sall1a	99	66.035	ENSCAFG00020002842	SALL1	100	65.700	Canis_lupus_dingo
ENSELUG00000006159	sall1a	100	65.349	ENSCHIG00000026074	SALL1	100	65.251	Capra_hircus
ENSELUG00000006159	sall1a	99	66.958	ENSTSYG00000029464	SALL1	100	66.453	Carlito_syrichta
ENSELUG00000006159	sall1a	99	66.205	ENSCPOG00000006564	SALL1	99	66.279	Cavia_porcellus
ENSELUG00000006159	sall1a	99	64.504	ENSCCAG00000001639	SALL1	100	65.078	Cebus_capucinus
ENSELUG00000006159	sall1a	99	66.255	ENSCATG00000004982	SALL1	100	66.643	Cercocebus_atys
ENSELUG00000006159	sall1a	99	65.530	ENSCLAG00000006380	SALL1	100	65.325	Chinchilla_lanigera
ENSELUG00000006159	sall1a	99	65.600	ENSCSAG00000005319	SALL1	100	66.145	Chlorocebus_sabaeus
ENSELUG00000006159	sall1a	68	65.385	ENSCHOG00000000800	-	69	65.504	Choloepus_hoffmanni
ENSELUG00000006159	sall1a	100	67.855	ENSCPBG00000015924	SALL1	100	67.949	Chrysemys_picta_bellii
ENSELUG00000006159	sall1a	99	66.399	ENSCANG00000036664	SALL1	100	66.714	Colobus_angolensis_palliatus
ENSELUG00000006159	sall1a	99	64.410	ENSCGRG00001023314	-	100	64.484	Cricetulus_griseus_chok1gshd
ENSELUG00000006159	sall1a	99	64.410	ENSCGRG00000009496	Sall1	99	64.646	Cricetulus_griseus_crigri
ENSELUG00000006159	sall1a	99	76.341	ENSCSEG00000009349	sall1a	99	76.361	Cynoglossus_semilaevis
ENSELUG00000006159	sall1a	91	75.981	ENSCVAG00000020513	sall1a	99	75.741	Cyprinodon_variegatus
ENSELUG00000006159	sall1a	100	75.179	ENSDARG00000074319	sall1a	100	74.535	Danio_rerio
ENSELUG00000006159	sall1a	99	45.791	ENSDARG00000075891	sall1b	99	45.241	Danio_rerio
ENSELUG00000006159	sall1a	99	66.425	ENSDNOG00000016413	SALL1	100	66.079	Dasypus_novemcinctus
ENSELUG00000006159	sall1a	99	66.035	ENSETEG00000015150	SALL1	99	65.818	Echinops_telfairi
ENSELUG00000006159	sall1a	68	63.462	ENSEBUG00000008798	SALL1	65	63.462	Eptatretus_burgeri
ENSELUG00000006159	sall1a	65	65.385	ENSEBUG00000011732	SALL1	64	65.385	Eptatretus_burgeri
ENSELUG00000006159	sall1a	99	65.743	ENSEASG00005014602	SALL1	100	66.055	Equus_asinus_asinus
ENSELUG00000006159	sall1a	91	63.069	ENSECAG00000011334	SALL1	99	64.114	Equus_caballus
ENSELUG00000006159	sall1a	99	66.472	ENSEEUG00000002014	SALL1	99	66.206	Erinaceus_europaeus
ENSELUG00000006159	sall1a	100	64.498	ENSFCAG00000024654	SALL1	100	65.319	Felis_catus
ENSELUG00000006159	sall1a	100	67.589	ENSFALG00000000074	SALL1	100	67.520	Ficedula_albicollis
ENSELUG00000006159	sall1a	85	63.265	ENSFHEG00000008424	-	100	63.265	Fundulus_heteroclitus
ENSELUG00000006159	sall1a	100	77.044	ENSFHEG00000012579	sall1a	100	76.973	Fundulus_heteroclitus
ENSELUG00000006159	sall1a	100	76.923	ENSGMOG00000006103	sall1a	100	76.851	Gadus_morhua
ENSELUG00000006159	sall1a	90	56.757	ENSGMOG00000013383	-	99	39.472	Gadus_morhua
ENSELUG00000006159	sall1a	100	67.756	ENSGALG00000039238	SALL1	100	67.806	Gallus_gallus
ENSELUG00000006159	sall1a	100	77.348	ENSGAFG00000009964	sall1a	100	77.276	Gambusia_affinis
ENSELUG00000006159	sall1a	99	76.796	ENSGACG00000016702	sall1a	99	76.652	Gasterosteus_aculeatus
ENSELUG00000006159	sall1a	100	67.855	ENSGAGG00000013979	SALL1	100	67.949	Gopherus_agassizii
ENSELUG00000006159	sall1a	99	66.545	ENSGGOG00000000663	SALL1	100	66.714	Gorilla_gorilla
ENSELUG00000006159	sall1a	100	76.923	ENSHBUG00000022005	sall1a	100	76.995	Haplochromis_burtoni
ENSELUG00000006159	sall1a	99	66.352	ENSHGLG00000004288	-	100	66.337	Heterocephalus_glaber_female
ENSELUG00000006159	sall1a	99	66.352	ENSHGLG00100017496	SALL1	100	66.337	Heterocephalus_glaber_male
ENSELUG00000006159	sall1a	100	74.212	ENSHCOG00000000974	sall1a	100	73.926	Hippocampus_comes
ENSELUG00000006159	sall1a	99	48.125	ENSIPUG00000022928	sall1b	99	47.622	Ictalurus_punctatus
ENSELUG00000006159	sall1a	100	75.341	ENSIPUG00000016265	SALL1	100	75.269	Ictalurus_punctatus
ENSELUG00000006159	sall1a	99	65.962	ENSSTOG00000020885	SALL1	100	66.217	Ictidomys_tridecemlineatus
ENSELUG00000006159	sall1a	100	77.818	ENSKMAG00000016681	sall1a	100	77.602	Kryptolebias_marmoratus
ENSELUG00000006159	sall1a	99	76.436	ENSLBEG00000012207	sall1a	95	76.289	Labrus_bergylta
ENSELUG00000006159	sall1a	100	65.862	ENSLACG00000003556	SALL1	100	65.932	Latimeria_chalumnae
ENSELUG00000006159	sall1a	86	61.538	ENSLACG00000014018	-	93	41.693	Latimeria_chalumnae
ENSELUG00000006159	sall1a	100	88.000	ENSLOCG00000007283	sall1b	94	88.000	Lepisosteus_oculatus
ENSELUG00000006159	sall1a	99	66.253	ENSLAFG00000015251	SALL1	99	66.496	Loxodonta_africana
ENSELUG00000006159	sall1a	99	66.618	ENSMFAG00000003298	SALL1	100	66.927	Macaca_fascicularis
ENSELUG00000006159	sall1a	99	65.956	ENSMMUG00000017200	SALL1	100	66.667	Macaca_mulatta
ENSELUG00000006159	sall1a	99	65.880	ENSMNEG00000034770	SALL1	100	66.667	Macaca_nemestrina
ENSELUG00000006159	sall1a	99	66.255	ENSMLEG00000036406	SALL1	100	66.714	Mandrillus_leucophaeus
ENSELUG00000006159	sall1a	99	78.839	ENSMAMG00000004164	sall1a	100	78.026	Mastacembelus_armatus
ENSELUG00000006159	sall1a	100	76.995	ENSMZEG00005006479	sall1a	100	76.923	Maylandia_zebra
ENSELUG00000006159	sall1a	100	66.947	ENSMGAG00000004704	SALL1	99	67.716	Meleagris_gallopavo
ENSELUG00000006159	sall1a	100	63.875	ENSMAUG00000019093	Sall1	100	64.301	Mesocricetus_auratus
ENSELUG00000006159	sall1a	100	65.845	ENSMICG00000036486	SALL1	100	65.632	Microcebus_murinus
ENSELUG00000006159	sall1a	99	77.770	ENSMMOG00000016400	sall1a	99	77.698	Mola_mola
ENSELUG00000006159	sall1a	99	67.153	ENSMODG00000013114	SALL1	99	67.021	Monodelphis_domestica
ENSELUG00000006159	sall1a	99	78.015	ENSMALG00000013400	sall1a	100	77.818	Monopterus_albus
ENSELUG00000006159	sall1a	100	64.493	MGP_CAROLIEiJ_G0031362	Sall1	100	64.463	Mus_caroli
ENSELUG00000006159	sall1a	100	64.493	ENSMUSG00000031665	Sall1	100	64.493	Mus_musculus
ENSELUG00000006159	sall1a	99	63.610	MGP_PahariEiJ_G0022961	Sall1	100	63.611	Mus_pahari
ENSELUG00000006159	sall1a	100	63.977	MGP_SPRETEiJ_G0032480	Sall1	100	64.564	Mus_spretus
ENSELUG00000006159	sall1a	100	64.692	ENSMPUG00000003265	SALL1	96	65.068	Mustela_putorius_furo
ENSELUG00000006159	sall1a	100	62.491	ENSMLUG00000015541	SALL1	99	63.893	Myotis_lucifugus
ENSELUG00000006159	sall1a	100	77.426	ENSNBRG00000009307	sall1a	100	77.498	Neolamprologus_brichardi
ENSELUG00000006159	sall1a	93	81.006	ENSNLEG00000001008	SALL1	99	80.556	Nomascus_leucogenys
ENSELUG00000006159	sall1a	99	67.105	ENSMEUG00000012206	SALL1	99	67.071	Notamacropus_eugenii
ENSELUG00000006159	sall1a	77	68.622	ENSOPRG00000005645	SALL1	71	68.299	Ochotona_princeps
ENSELUG00000006159	sall1a	99	66.254	ENSODEG00000003685	SALL1	100	66.028	Octodon_degus
ENSELUG00000006159	sall1a	100	77.426	ENSONIG00000002831	sall1a	100	77.283	Oreochromis_niloticus
ENSELUG00000006159	sall1a	84	74.532	ENSOANG00000013399	SALL1	95	74.717	Ornithorhynchus_anatinus
ENSELUG00000006159	sall1a	100	77.083	ENSORLG00000013827	sall1a	100	77.129	Oryzias_latipes
ENSELUG00000006159	sall1a	100	76.940	ENSORLG00020020570	sall1a	100	76.868	Oryzias_latipes_hni
ENSELUG00000006159	sall1a	100	76.940	ENSORLG00015018830	sall1a	100	77.050	Oryzias_latipes_hsok
ENSELUG00000006159	sall1a	100	76.995	ENSOMEG00000016043	sall1a	100	76.995	Oryzias_melastigma
ENSELUG00000006159	sall1a	100	66.056	ENSOGAG00000027316	SALL1	100	66.267	Otolemur_garnettii
ENSELUG00000006159	sall1a	100	61.577	ENSOARG00000017583	SALL1	100	61.631	Ovis_aries
ENSELUG00000006159	sall1a	99	66.618	ENSPPAG00000035657	SALL1	99	66.861	Pan_paniscus
ENSELUG00000006159	sall1a	99	49.123	ENSPPAG00000035136	-	98	50.292	Pan_paniscus
ENSELUG00000006159	sall1a	100	64.195	ENSPPRG00000023283	SALL1	100	65.035	Panthera_pardus
ENSELUG00000006159	sall1a	67	66.838	ENSPTIG00000013539	-	94	67.179	Panthera_tigris_altaica
ENSELUG00000006159	sall1a	99	66.472	ENSPTRG00000008108	SALL1	100	66.714	Pan_troglodytes
ENSELUG00000006159	sall1a	99	47.984	ENSPTRG00000045256	-	97	50.409	Pan_troglodytes
ENSELUG00000006159	sall1a	99	66.182	ENSPANG00000024176	SALL1	100	66.643	Papio_anubis
ENSELUG00000006159	sall1a	100	67.546	ENSPKIG00000005383	-	100	67.645	Paramormyrops_kingsleyae
ENSELUG00000006159	sall1a	100	69.779	ENSPKIG00000022251	sall1a	100	69.094	Paramormyrops_kingsleyae
ENSELUG00000006159	sall1a	100	67.781	ENSPSIG00000008582	SALL1	100	67.949	Pelodiscus_sinensis
ENSELUG00000006159	sall1a	99	74.540	ENSPMGG00000021788	sall1a	100	73.475	Periophthalmus_magnuspinnatus
ENSELUG00000006159	sall1a	99	66.959	ENSPCIG00000017840	SALL1	99	66.857	Phascolarctos_cinereus
ENSELUG00000006159	sall1a	100	76.947	ENSPFOG00000015799	sall1a	96	77.372	Poecilia_formosa
ENSELUG00000006159	sall1a	100	77.690	ENSPLAG00000022539	sall1a	100	77.618	Poecilia_latipinna
ENSELUG00000006159	sall1a	100	77.690	ENSPMEG00000020894	sall1a	100	77.618	Poecilia_mexicana
ENSELUG00000006159	sall1a	100	77.618	ENSPREG00000006802	sall1a	100	77.547	Poecilia_reticulata
ENSELUG00000006159	sall1a	91	65.166	ENSPPYG00000007345	SALL1	96	65.879	Pongo_abelii
ENSELUG00000006159	sall1a	83	81.818	ENSPCAG00000008162	SALL1	90	81.818	Procavia_capensis
ENSELUG00000006159	sall1a	100	66.406	ENSPCOG00000028192	SALL1	100	66.596	Propithecus_coquereli
ENSELUG00000006159	sall1a	79	66.197	ENSPVAG00000015374	SALL1	100	65.625	Pteropus_vampyrus
ENSELUG00000006159	sall1a	100	77.139	ENSPNYG00000010865	sall1a	100	77.067	Pundamilia_nyererei
ENSELUG00000006159	sall1a	100	75.842	ENSPNAG00000023644	sall1a	100	75.771	Pygocentrus_nattereri
ENSELUG00000006159	sall1a	99	51.597	ENSPNAG00000007442	sall1b	99	51.384	Pygocentrus_nattereri
ENSELUG00000006159	sall1a	100	64.099	ENSRNOG00000013907	Sall1	100	63.828	Rattus_norvegicus
ENSELUG00000006159	sall1a	99	65.649	ENSRBIG00000015707	SALL1	100	66.590	Rhinopithecus_bieti
ENSELUG00000006159	sall1a	99	66.618	ENSRROG00000035777	SALL1	100	66.667	Rhinopithecus_roxellana
ENSELUG00000006159	sall1a	99	66.472	ENSSBOG00000032186	SALL1	100	66.643	Saimiri_boliviensis_boliviensis
ENSELUG00000006159	sall1a	99	66.740	ENSSHAG00000009477	SALL1	99	66.785	Sarcophilus_harrisii
ENSELUG00000006159	sall1a	100	69.231	ENSSFOG00015020020	sall1a	100	69.116	Scleropages_formosus
ENSELUG00000006159	sall1a	100	68.510	ENSSFOG00015001590	sall1a	99	68.800	Scleropages_formosus
ENSELUG00000006159	sall1a	99	78.305	ENSSMAG00000009160	sall1a	99	78.305	Scophthalmus_maximus
ENSELUG00000006159	sall1a	78	59.615	ENSSDUG00000000748	sall1b	88	59.615	Seriola_dumerili
ENSELUG00000006159	sall1a	99	78.592	ENSSDUG00000006507	sall1a	100	78.164	Seriola_dumerili
ENSELUG00000006159	sall1a	99	78.592	ENSSLDG00000017721	sall1a	99	78.951	Seriola_lalandi_dorsalis
ENSELUG00000006159	sall1a	99	65.410	ENSSARG00000000661	SALL1	99	65.723	Sorex_araneus
ENSELUG00000006159	sall1a	100	67.189	ENSSPUG00000000156	SALL1	100	67.260	Sphenodon_punctatus
ENSELUG00000006159	sall1a	100	79.080	ENSSPAG00000021615	sall1a	100	79.008	Stegastes_partitus
ENSELUG00000006159	sall1a	100	64.851	ENSSSCG00000002836	SALL1	100	65.395	Sus_scrofa
ENSELUG00000006159	sall1a	100	67.518	ENSTGUG00000007514	SALL1	100	67.520	Taeniopygia_guttata
ENSELUG00000006159	sall1a	92	74.902	ENSTRUG00000008950	sall1a	100	75.137	Takifugu_rubripes
ENSELUG00000006159	sall1a	92	74.417	ENSTNIG00000004257	sall1a	100	74.728	Tetraodon_nigroviridis
ENSELUG00000006159	sall1a	71	76.712	ENSTBEG00000002119	-	53	76.712	Tupaia_belangeri
ENSELUG00000006159	sall1a	91	65.059	ENSUAMG00000023379	-	92	64.980	Ursus_americanus
ENSELUG00000006159	sall1a	91	64.145	ENSVVUG00000019383	-	99	64.650	Vulpes_vulpes
ENSELUG00000006159	sall1a	100	64.602	ENSXETG00000018417	sall1	100	63.554	Xenopus_tropicalis
ENSELUG00000006159	sall1a	89	61.538	ENSXETG00000017176	sall2	89	61.538	Xenopus_tropicalis
ENSELUG00000006159	sall1a	100	77.491	ENSXMAG00000016273	sall1a	100	77.419	Xiphophorus_maculatus