EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000006266 (Gene tree)
Gene ID: 105019363
Gene Symbol: nom1
Alias: si:ch211-266o5.1
Full Name: nucleolar protein with MIF4G domain 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 11213 bases
Position: chrLG21:2006707-2017919
Accession: 105019363
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000005211	MA3	PF02847.17	2.3e-21	1	1
ENSELUP00000005211	MIF4G	PF02854.19	1.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000011054	-	3722	XM_010885493	ENSELUP00000005211	847 (aa)	XP_010883795	UPI000576CA4D

Gene Model

Click here to download ENSELUG00000006266's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000006266's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000006266	nom1	81	58.650	ENSG00000146909	NOM1	61	67.803	Homo_sapiens
ENSELUG00000006266	nom1	63	81.887	ENSAPOG00000012073	nom1	65	80.256	Acanthochromis_polyacanthus
ENSELUG00000006266	nom1	81	56.695	ENSAMEG00000001412	NOM1	72	66.157	Ailuropoda_melanoleuca
ENSELUG00000006266	nom1	91	82.252	ENSACIG00000018050	nom1	99	66.276	Amphilophus_citrinellus
ENSELUG00000006266	nom1	64	80.185	ENSAOCG00000006229	nom1	65	79.455	Amphiprion_ocellaris
ENSELUG00000006266	nom1	64	80.000	ENSAPEG00000015994	nom1	65	79.273	Amphiprion_percula
ENSELUG00000006266	nom1	100	68.038	ENSATEG00000005405	nom1	64	82.286	Anabas_testudineus
ENSELUG00000006266	nom1	78	59.111	ENSAPLG00000006585	NOM1	80	67.992	Anas_platyrhynchos
ENSELUG00000006266	nom1	79	58.488	ENSACAG00000011192	NOM1	63	67.279	Anolis_carolinensis
ENSELUG00000006266	nom1	98	67.425	ENSACLG00000000033	nom1	99	65.452	Astatotilapia_calliptera
ENSELUG00000006266	nom1	62	74.248	ENSAMXG00000041486	nom1	63	72.909	Astyanax_mexicanus
ENSELUG00000006266	nom1	81	57.102	ENSBTAG00000016435	NOM1	61	65.966	Bos_taurus
ENSELUG00000006266	nom1	93	54.693	ENSCJAG00000004336	NOM1	61	67.304	Callithrix_jacchus
ENSELUG00000006266	nom1	81	56.818	ENSCAFG00020005121	NOM1	63	63.736	Canis_lupus_dingo
ENSELUG00000006266	nom1	81	56.738	ENSCHIG00000020102	NOM1	62	65.583	Capra_hircus
ENSELUG00000006266	nom1	94	55.764	ENSTSYG00000000227	NOM1	63	67.619	Carlito_syrichta
ENSELUG00000006266	nom1	61	68.593	ENSCAPG00000016273	NOM1	99	68.593	Cavia_aperea
ENSELUG00000006266	nom1	94	51.911	ENSCPOG00000025538	NOM1	63	62.500	Cavia_porcellus
ENSELUG00000006266	nom1	73	67.062	ENSCCAG00000014944	NOM1	99	67.797	Cebus_capucinus
ENSELUG00000006266	nom1	84	55.923	ENSCLAG00000000267	NOM1	61	66.348	Chinchilla_lanigera
ENSELUG00000006266	nom1	71	69.318	ENSCPBG00000018215	NOM1	72	69.318	Chrysemys_picta_bellii
ENSELUG00000006266	nom1	63	40.706	ENSCING00000005248	-	72	40.706	Ciona_intestinalis
ENSELUG00000006266	nom1	66	62.414	ENSCANG00000041984	NOM1	90	66.667	Colobus_angolensis_palliatus
ENSELUG00000006266	nom1	61	67.241	ENSCGRG00001020293	Nom1	61	67.241	Cricetulus_griseus_chok1gshd
ENSELUG00000006266	nom1	61	67.241	ENSCGRG00000005405	Nom1	98	67.241	Cricetulus_griseus_crigri
ENSELUG00000006266	nom1	94	64.160	ENSCSEG00000000932	nom1	63	75.634	Cynoglossus_semilaevis
ENSELUG00000006266	nom1	98	65.042	ENSCVAG00000007562	nom1	66	77.858	Cyprinodon_variegatus
ENSELUG00000006266	nom1	62	77.040	ENSDARG00000060027	nom1	100	77.207	Danio_rerio
ENSELUG00000006266	nom1	61	56.654	ENSDORG00000015682	Nom1	76	56.654	Dipodomys_ordii
ENSELUG00000006266	nom1	58	38.976	FBgn0035336	CG9004	59	38.976	Drosophila_melanogaster
ENSELUG00000006266	nom1	73	57.381	ENSETEG00000003104	NOM1	57	58.333	Echinops_telfairi
ENSELUG00000006266	nom1	51	51.716	ENSEBUG00000010077	nom1	96	51.716	Eptatretus_burgeri
ENSELUG00000006266	nom1	81	59.334	ENSEASG00005001489	NOM1	63	66.912	Equus_asinus_asinus
ENSELUG00000006266	nom1	81	59.544	ENSECAG00000007596	NOM1	58	66.544	Equus_caballus
ENSELUG00000006266	nom1	81	58.083	ENSFCAG00000006467	NOM1	66	65.328	Felis_catus
ENSELUG00000006266	nom1	82	59.040	ENSFALG00000006904	NOM1	78	66.727	Ficedula_albicollis
ENSELUG00000006266	nom1	94	53.761	ENSFDAG00000016241	NOM1	65	64.695	Fukomys_damarensis
ENSELUG00000006266	nom1	62	80.038	ENSFHEG00000015974	nom1	64	80.038	Fundulus_heteroclitus
ENSELUG00000006266	nom1	84	64.649	ENSGMOG00000005129	nom1	69	71.992	Gadus_morhua
ENSELUG00000006266	nom1	85	56.948	ENSGALG00000006437	NOM1	61	66.856	Gallus_gallus
ENSELUG00000006266	nom1	98	63.872	ENSGAFG00000003211	nom1	66	76.044	Gambusia_affinis
ENSELUG00000006266	nom1	82	59.632	ENSGAGG00000014347	NOM1	62	69.508	Gopherus_agassizii
ENSELUG00000006266	nom1	62	67.547	ENSGGOG00000010920	NOM1	57	67.547	Gorilla_gorilla
ENSELUG00000006266	nom1	98	67.262	ENSHBUG00000014616	nom1	99	65.805	Haplochromis_burtoni
ENSELUG00000006266	nom1	98	51.508	ENSHGLG00000007392	NOM1	60	67.500	Heterocephalus_glaber_female
ENSELUG00000006266	nom1	85	67.628	ENSHGLG00100014407	NOM1	60	67.500	Heterocephalus_glaber_male
ENSELUG00000006266	nom1	62	72.676	ENSIPUG00000013980	nom1	65	70.727	Ictalurus_punctatus
ENSELUG00000006266	nom1	68	63.167	ENSSTOG00000031736	NOM1	91	67.878	Ictidomys_tridecemlineatus
ENSELUG00000006266	nom1	57	68.247	ENSJJAG00000011716	Nom1	98	68.247	Jaculus_jaculus
ENSELUG00000006266	nom1	62	82.163	ENSLBEG00000009252	nom1	63	80.295	Labrus_bergylta
ENSELUG00000006266	nom1	83	63.300	ENSLACG00000011777	NOM1	64	69.565	Latimeria_chalumnae
ENSELUG00000006266	nom1	98	63.561	ENSLOCG00000012452	nom1	65	77.186	Lepisosteus_oculatus
ENSELUG00000006266	nom1	98	49.176	ENSLAFG00000007119	NOM1	64	62.667	Loxodonta_africana
ENSELUG00000006266	nom1	62	62.808	ENSMMUG00000039033	NOM1	62	61.202	Macaca_mulatta
ENSELUG00000006266	nom1	62	67.238	ENSMLEG00000037062	NOM1	99	67.238	Mandrillus_leucophaeus
ENSELUG00000006266	nom1	98	67.102	ENSMAMG00000004118	nom1	65	77.920	Mastacembelus_armatus
ENSELUG00000006266	nom1	98	67.186	ENSMZEG00005000384	nom1	99	65.335	Maylandia_zebra
ENSELUG00000006266	nom1	83	56.906	ENSMGAG00000005051	NOM1	77	66.477	Meleagris_gallopavo
ENSELUG00000006266	nom1	97	52.708	ENSMAUG00000017988	Nom1	63	67.625	Mesocricetus_auratus
ENSELUG00000006266	nom1	97	53.012	ENSMICG00000017531	NOM1	62	67.308	Microcebus_murinus
ENSELUG00000006266	nom1	61	67.816	ENSMOCG00000015962	Nom1	62	67.816	Microtus_ochrogaster
ENSELUG00000006266	nom1	99	63.931	ENSMMOG00000004419	nom1	65	74.725	Mola_mola
ENSELUG00000006266	nom1	64	68.073	ENSMODG00000005177	NOM1	64	68.073	Monodelphis_domestica
ENSELUG00000006266	nom1	92	68.056	ENSMALG00000008800	nom1	63	78.600	Monopterus_albus
ENSELUG00000006266	nom1	98	51.794	MGP_CAROLIEiJ_G0027043	Nom1	61	66.092	Mus_caroli
ENSELUG00000006266	nom1	98	51.914	ENSMUSG00000001569	Nom1	61	66.284	Mus_musculus
ENSELUG00000006266	nom1	98	51.594	MGP_SPRETEiJ_G0028039	Nom1	61	66.284	Mus_spretus
ENSELUG00000006266	nom1	81	55.319	ENSMPUG00000009745	NOM1	76	64.818	Mustela_putorius_furo
ENSELUG00000006266	nom1	71	60.956	ENSMLUG00000009129	NOM1	91	64.416	Myotis_lucifugus
ENSELUG00000006266	nom1	98	66.745	ENSNBRG00000016429	nom1	95	80.529	Neolamprologus_brichardi
ENSELUG00000006266	nom1	98	51.688	ENSNLEG00000000238	NOM1	61	65.602	Nomascus_leucogenys
ENSELUG00000006266	nom1	69	55.866	ENSMEUG00000001108	NOM1	53	69.030	Notamacropus_eugenii
ENSELUG00000006266	nom1	51	57.096	ENSOPRG00000014676	NOM1	52	54.969	Ochotona_princeps
ENSELUG00000006266	nom1	81	57.183	ENSODEG00000009399	NOM1	98	57.567	Octodon_degus
ENSELUG00000006266	nom1	94	68.789	ENSONIG00000005958	nom1	69	79.525	Oreochromis_niloticus
ENSELUG00000006266	nom1	55	66.739	ENSOANG00000006139	-	97	66.739	Ornithorhynchus_anatinus
ENSELUG00000006266	nom1	93	45.953	ENSOCUG00000021448	-	84	54.775	Oryctolagus_cuniculus
ENSELUG00000006266	nom1	98	53.592	ENSOCUG00000004071	-	64	66.727	Oryctolagus_cuniculus
ENSELUG00000006266	nom1	100	67.020	ENSORLG00000010541	nom1	67	77.636	Oryzias_latipes
ENSELUG00000006266	nom1	92	67.344	ENSORLG00020010789	nom1	99	66.076	Oryzias_latipes_hni
ENSELUG00000006266	nom1	98	67.146	ENSORLG00015010475	nom1	72	77.455	Oryzias_latipes_hsok
ENSELUG00000006266	nom1	62	80.340	ENSOMEG00000004219	nom1	66	78.832	Oryzias_melastigma
ENSELUG00000006266	nom1	71	61.639	ENSOGAG00000001124	NOM1	86	68.260	Otolemur_garnettii
ENSELUG00000006266	nom1	81	56.879	ENSOARG00000007261	NOM1	70	65.583	Ovis_aries
ENSELUG00000006266	nom1	81	59.406	ENSPPAG00000041374	NOM1	61	67.803	Pan_paniscus
ENSELUG00000006266	nom1	81	57.001	ENSPTIG00000013532	NOM1	74	65.265	Panthera_tigris_altaica
ENSELUG00000006266	nom1	81	58.748	ENSPTRG00000019917	NOM1	62	67.547	Pan_troglodytes
ENSELUG00000006266	nom1	98	51.962	ENSPANG00000007605	NOM1	60	67.495	Papio_anubis
ENSELUG00000006266	nom1	100	61.440	ENSPKIG00000005825	nom1	63	71.917	Paramormyrops_kingsleyae
ENSELUG00000006266	nom1	63	69.288	ENSPSIG00000017848	NOM1	89	69.288	Pelodiscus_sinensis
ENSELUG00000006266	nom1	100	65.105	ENSPMGG00000002577	nom1	67	76.600	Periophthalmus_magnuspinnatus
ENSELUG00000006266	nom1	97	52.123	ENSPEMG00000024180	Nom1	61	68.582	Peromyscus_maniculatus_bairdii
ENSELUG00000006266	nom1	62	68.130	ENSPCIG00000027941	NOM1	60	66.422	Phascolarctos_cinereus
ENSELUG00000006266	nom1	62	79.773	ENSPFOG00000015771	nom1	65	77.495	Poecilia_formosa
ENSELUG00000006266	nom1	68	75.478	ENSPLAG00000007856	nom1	68	77.132	Poecilia_latipinna
ENSELUG00000006266	nom1	87	79.395	ENSPMEG00000014155	nom1	68	77.132	Poecilia_mexicana
ENSELUG00000006266	nom1	98	64.176	ENSPREG00000008850	nom1	66	76.492	Poecilia_reticulata
ENSELUG00000006266	nom1	98	48.897	ENSPPYG00000018222	NOM1	60	61.742	Pongo_abelii
ENSELUG00000006266	nom1	75	61.395	ENSPCAG00000000440	NOM1	68	61.395	Procavia_capensis
ENSELUG00000006266	nom1	62	66.286	ENSPCOG00000015222	NOM1	99	66.286	Propithecus_coquereli
ENSELUG00000006266	nom1	81	57.676	ENSPVAG00000014760	NOM1	63	64.576	Pteropus_vampyrus
ENSELUG00000006266	nom1	98	67.186	ENSPNYG00000006975	nom1	96	80.189	Pundamilia_nyererei
ENSELUG00000006266	nom1	65	73.646	ENSPNAG00000011085	nom1	61	73.818	Pygocentrus_nattereri
ENSELUG00000006266	nom1	98	49.761	ENSRNOG00000048969	AABR07059041.1	64	63.027	Rattus_norvegicus
ENSELUG00000006266	nom1	94	54.353	ENSRBIG00000037042	NOM1	63	65.265	Rhinopithecus_bieti
ENSELUG00000006266	nom1	94	54.104	ENSRROG00000037293	NOM1	63	64.899	Rhinopithecus_roxellana
ENSELUG00000006266	nom1	64	67.587	ENSSHAG00000017998	-	79	67.587	Sarcophilus_harrisii
ENSELUG00000006266	nom1	57	73.457	ENSSFOG00015003196	nom1	100	73.457	Scleropages_formosus
ENSELUG00000006266	nom1	98	67.494	ENSSMAG00000011047	nom1	63	81.015	Scophthalmus_maximus
ENSELUG00000006266	nom1	98	70.588	ENSSDUG00000006834	nom1	65	80.292	Seriola_dumerili
ENSELUG00000006266	nom1	63	82.264	ENSSLDG00000021812	nom1	65	80.292	Seriola_lalandi_dorsalis
ENSELUG00000006266	nom1	87	50.199	ENSSPUG00000002556	NOM1	90	68.553	Sphenodon_punctatus
ENSELUG00000006266	nom1	66	79.286	ENSSPAG00000000953	nom1	63	80.586	Stegastes_partitus
ENSELUG00000006266	nom1	82	57.709	ENSTGUG00000000702	-	75	67.992	Taeniopygia_guttata
ENSELUG00000006266	nom1	65	76.259	ENSTRUG00000010239	nom1	65	77.348	Takifugu_rubripes
ENSELUG00000006266	nom1	98	65.248	ENSTNIG00000012783	nom1	69	76.766	Tetraodon_nigroviridis
ENSELUG00000006266	nom1	80	57.681	ENSTTRG00000009691	NOM1	63	65.356	Tursiops_truncatus
ENSELUG00000006266	nom1	81	58.333	ENSUAMG00000025450	NOM1	63	64.781	Ursus_americanus
ENSELUG00000006266	nom1	85	56.216	ENSUMAG00000014275	NOM1	76	66.539	Ursus_maritimus
ENSELUG00000006266	nom1	74	66.210	ENSVVUG00000002608	NOM1	58	70.445	Vulpes_vulpes
ENSELUG00000006266	nom1	87	57.050	ENSXETG00000021611	nom1	82	72.195	Xenopus_tropicalis
ENSELUG00000006266	nom1	98	64.336	ENSXMAG00000002451	nom1	66	76.225	Xiphophorus_maculatus