EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000006440 (Gene tree)
Gene ID: 105028524
Gene Symbol: rbm17
Alias: zgc:55840
Full Name: RNA binding motif protein 17
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 5182 bases
Position: chrLG23:8625480-8630661
Accession: 105028524
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000029480	RRM_1	PF00076.22	1.2e-05	1	1
ENSELUP00000005387	G-patch	PF01585.23	9.4e-13	1	1
ENSELUP00000029480	G-patch	PF01585.23	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000010727	-	1675	XM_010901303	ENSELUP00000029480	429 (aa)	XP_010899605	UPI0005780200
ENSELUT00000010758	-	1158	-	ENSELUP00000005387	385 (aa)	-	-

Gene Model

Click here to download ENSELUG00000006440's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000006440's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000006440	rbm17	100	77.083	ENSG00000134453	RBM17	100	77.083	Homo_sapiens
ENSELUG00000006440	rbm17	99	87.294	ENSAPOG00000007101	rbm17	99	87.294	Acanthochromis_polyacanthus
ENSELUG00000006440	rbm17	100	77.315	ENSAMEG00000002107	RBM17	100	77.315	Ailuropoda_melanoleuca
ENSELUG00000006440	rbm17	100	81.395	ENSACIG00000006251	rbm17	100	81.395	Amphilophus_citrinellus
ENSELUG00000006440	rbm17	100	87.179	ENSAOCG00000014892	rbm17	100	87.179	Amphiprion_ocellaris
ENSELUG00000006440	rbm17	100	87.179	ENSAPEG00000022779	rbm17	100	87.179	Amphiprion_percula
ENSELUG00000006440	rbm17	100	85.315	ENSATEG00000004406	rbm17	100	85.315	Anabas_testudineus
ENSELUG00000006440	rbm17	100	76.620	ENSAPLG00000004190	RBM17	100	76.620	Anas_platyrhynchos
ENSELUG00000006440	rbm17	90	74.684	ENSACAG00000005418	RBM17	99	73.671	Anolis_carolinensis
ENSELUG00000006440	rbm17	100	77.546	ENSANAG00000030127	RBM17	94	88.793	Aotus_nancymaae
ENSELUG00000006440	rbm17	100	66.743	ENSANAG00000019330	-	95	84.483	Aotus_nancymaae
ENSELUG00000006440	rbm17	100	80.186	ENSACLG00000003928	rbm17	100	80.186	Astatotilapia_calliptera
ENSELUG00000006440	rbm17	100	84.149	ENSAMXG00000005853	rbm17	100	84.382	Astyanax_mexicanus
ENSELUG00000006440	rbm17	100	75.463	ENSBTAG00000011094	-	100	75.463	Bos_taurus
ENSELUG00000006440	rbm17	100	76.852	ENSBTAG00000021951	RBM17	100	76.852	Bos_taurus
ENSELUG00000006440	rbm17	75	31.385	WBGene00010233	F58B3.7	91	30.024	Caenorhabditis_elegans
ENSELUG00000006440	rbm17	100	77.546	ENSCJAG00000020573	RBM17	100	77.546	Callithrix_jacchus
ENSELUG00000006440	rbm17	100	77.315	ENSCAFG00000005206	RBM17	100	77.315	Canis_familiaris
ENSELUG00000006440	rbm17	100	74.419	ENSCAFG00020005420	RBM17	100	74.419	Canis_lupus_dingo
ENSELUG00000006440	rbm17	100	74.769	ENSCHIG00000019921	-	100	74.769	Capra_hircus
ENSELUG00000006440	rbm17	100	76.852	ENSCHIG00000023204	-	100	76.852	Capra_hircus
ENSELUG00000006440	rbm17	100	77.083	ENSTSYG00000001165	RBM17	98	88.034	Carlito_syrichta
ENSELUG00000006440	rbm17	96	59.420	ENSCAPG00000006275	RBM17	100	62.725	Cavia_aperea
ENSELUG00000006440	rbm17	100	74.942	ENSCPOG00000005679	RBM17	100	74.942	Cavia_porcellus
ENSELUG00000006440	rbm17	100	77.546	ENSCCAG00000018655	RBM17	94	88.793	Cebus_capucinus
ENSELUG00000006440	rbm17	100	77.083	ENSCATG00000041566	RBM17	94	88.793	Cercocebus_atys
ENSELUG00000006440	rbm17	100	77.546	ENSCLAG00000012195	RBM17	99	77.546	Chinchilla_lanigera
ENSELUG00000006440	rbm17	100	77.083	ENSCSAG00000013564	RBM17	100	77.083	Chlorocebus_sabaeus
ENSELUG00000006440	rbm17	93	59.850	ENSCHOG00000005131	RBM17	100	58.853	Choloepus_hoffmanni
ENSELUG00000006440	rbm17	99	76.744	ENSCPBG00000019836	RBM17	99	76.977	Chrysemys_picta_bellii
ENSELUG00000006440	rbm17	99	42.889	ENSCSAVG00000008782	-	99	43.218	Ciona_savignyi
ENSELUG00000006440	rbm17	100	76.852	ENSCANG00000030987	RBM17	94	88.793	Colobus_angolensis_palliatus
ENSELUG00000006440	rbm17	97	69.544	ENSCANG00000023715	-	99	69.544	Colobus_angolensis_palliatus
ENSELUG00000006440	rbm17	100	60.839	ENSCGRG00001009256	-	100	60.140	Cricetulus_griseus_chok1gshd
ENSELUG00000006440	rbm17	100	77.778	ENSCGRG00001013842	Rbm17	100	77.778	Cricetulus_griseus_chok1gshd
ENSELUG00000006440	rbm17	100	77.778	ENSCGRG00000006907	Rbm17	100	77.778	Cricetulus_griseus_crigri
ENSELUG00000006440	rbm17	100	82.599	ENSCSEG00000018164	rbm17	100	82.599	Cynoglossus_semilaevis
ENSELUG00000006440	rbm17	100	76.690	ENSCVAG00000002476	rbm17	100	77.156	Cyprinodon_variegatus
ENSELUG00000006440	rbm17	100	78.472	ENSDARG00000031346	rbm17	100	80.093	Danio_rerio
ENSELUG00000006440	rbm17	100	77.546	ENSDNOG00000035920	RBM17	100	77.546	Dasypus_novemcinctus
ENSELUG00000006440	rbm17	99	36.304	FBgn0086683	Spf45	99	35.808	Drosophila_melanogaster
ENSELUG00000006440	rbm17	86	76.395	ENSETEG00000006642	RBM17	86	76.395	Echinops_telfairi
ENSELUG00000006440	rbm17	63	65.116	ENSEBUG00000010253	rbm17	87	65.116	Eptatretus_burgeri
ENSELUG00000006440	rbm17	100	74.651	ENSEASG00005019205	-	100	73.953	Equus_asinus_asinus
ENSELUG00000006440	rbm17	92	74.436	ENSEASG00005009236	-	100	74.436	Equus_asinus_asinus
ENSELUG00000006440	rbm17	100	70.677	ENSECAG00000008939	RBM17	100	71.285	Equus_caballus
ENSELUG00000006440	rbm17	100	72.634	ENSECAG00000001379	-	100	70.663	Equus_caballus
ENSELUG00000006440	rbm17	86	60.590	ENSEEUG00000013077	RBM17	100	60.590	Erinaceus_europaeus
ENSELUG00000006440	rbm17	100	77.315	ENSFCAG00000031988	RBM17	100	77.315	Felis_catus
ENSELUG00000006440	rbm17	100	76.620	ENSFALG00000001790	RBM17	100	76.620	Ficedula_albicollis
ENSELUG00000006440	rbm17	100	77.546	ENSFDAG00000007470	RBM17	100	77.546	Fukomys_damarensis
ENSELUG00000006440	rbm17	100	84.186	ENSFHEG00000001266	rbm17	100	82.838	Fundulus_heteroclitus
ENSELUG00000006440	rbm17	99	80.562	ENSGMOG00000008438	rbm17	100	80.562	Gadus_morhua
ENSELUG00000006440	rbm17	100	76.620	ENSGALG00000006332	RBM17	100	76.620	Gallus_gallus
ENSELUG00000006440	rbm17	100	82.558	ENSGAFG00000019879	rbm17	100	82.558	Gambusia_affinis
ENSELUG00000006440	rbm17	100	84.149	ENSGACG00000019174	rbm17	100	84.149	Gasterosteus_aculeatus
ENSELUG00000006440	rbm17	99	76.744	ENSGAGG00000019906	RBM17	99	76.977	Gopherus_agassizii
ENSELUG00000006440	rbm17	100	86.014	ENSHBUG00000016624	rbm17	100	86.014	Haplochromis_burtoni
ENSELUG00000006440	rbm17	100	77.546	ENSHGLG00000011580	RBM17	100	77.546	Heterocephalus_glaber_female
ENSELUG00000006440	rbm17	100	77.546	ENSHGLG00100010460	RBM17	100	77.546	Heterocephalus_glaber_male
ENSELUG00000006440	rbm17	100	62.471	ENSHGLG00100010556	-	100	60.373	Heterocephalus_glaber_male
ENSELUG00000006440	rbm17	99	82.436	ENSHCOG00000010865	rbm17	100	82.436	Hippocampus_comes
ENSELUG00000006440	rbm17	99	77.209	ENSIPUG00000007699	Rbm17	99	81.395	Ictalurus_punctatus
ENSELUG00000006440	rbm17	100	77.778	ENSSTOG00000013591	RBM17	100	77.778	Ictidomys_tridecemlineatus
ENSELUG00000006440	rbm17	100	57.701	ENSJJAG00000000993	-	100	55.275	Jaculus_jaculus
ENSELUG00000006440	rbm17	100	77.778	ENSJJAG00000022886	Rbm17	100	77.778	Jaculus_jaculus
ENSELUG00000006440	rbm17	100	84.149	ENSKMAG00000021400	rbm17	100	84.382	Kryptolebias_marmoratus
ENSELUG00000006440	rbm17	100	85.581	ENSLBEG00000000881	rbm17	100	85.581	Labrus_bergylta
ENSELUG00000006440	rbm17	99	64.598	ENSLACG00000017297	RBM17	99	65.057	Latimeria_chalumnae
ENSELUG00000006440	rbm17	100	80.415	ENSLOCG00000015659	rbm17	100	80.645	Lepisosteus_oculatus
ENSELUG00000006440	rbm17	100	77.315	ENSLAFG00000011629	RBM17	100	77.315	Loxodonta_africana
ENSELUG00000006440	rbm17	100	77.083	ENSMFAG00000035521	RBM17	94	88.793	Macaca_fascicularis
ENSELUG00000006440	rbm17	100	77.083	ENSMMUG00000015152	RBM17	94	88.793	Macaca_mulatta
ENSELUG00000006440	rbm17	100	77.083	ENSMNEG00000017264	RBM17	94	88.793	Macaca_nemestrina
ENSELUG00000006440	rbm17	100	77.083	ENSMLEG00000029340	RBM17	94	88.793	Mandrillus_leucophaeus
ENSELUG00000006440	rbm17	100	83.916	ENSMAMG00000000387	rbm17	100	83.916	Mastacembelus_armatus
ENSELUG00000006440	rbm17	100	86.014	ENSMZEG00005015179	rbm17	100	86.014	Maylandia_zebra
ENSELUG00000006440	rbm17	100	76.267	ENSMGAG00000003981	RBM17	100	76.267	Meleagris_gallopavo
ENSELUG00000006440	rbm17	100	77.778	ENSMAUG00000019247	Rbm17	100	77.778	Mesocricetus_auratus
ENSELUG00000006440	rbm17	100	71.724	ENSMICG00000041489	-	100	70.872	Microcebus_murinus
ENSELUG00000006440	rbm17	100	77.546	ENSMICG00000003976	-	100	77.546	Microcebus_murinus
ENSELUG00000006440	rbm17	100	77.778	ENSMOCG00000011847	Rbm17	100	77.778	Microtus_ochrogaster
ENSELUG00000006440	rbm17	92	63.065	ENSMOCG00000014517	-	98	62.814	Microtus_ochrogaster
ENSELUG00000006440	rbm17	100	75.806	ENSMMOG00000010264	rbm17	100	75.806	Mola_mola
ENSELUG00000006440	rbm17	100	77.315	ENSMODG00000016648	RBM17	100	77.315	Monodelphis_domestica
ENSELUG00000006440	rbm17	100	86.047	ENSMALG00000010597	rbm17	100	86.047	Monopterus_albus
ENSELUG00000006440	rbm17	100	77.778	MGP_CAROLIEiJ_G0023173	Rbm17	100	77.778	Mus_caroli
ENSELUG00000006440	rbm17	100	77.778	ENSMUSG00000037197	Rbm17	100	77.778	Mus_musculus
ENSELUG00000006440	rbm17	100	77.778	MGP_PahariEiJ_G0019233	Rbm17	100	77.778	Mus_pahari
ENSELUG00000006440	rbm17	100	77.778	MGP_SPRETEiJ_G0024091	Rbm17	100	77.778	Mus_spretus
ENSELUG00000006440	rbm17	87	75.467	ENSMPUG00000016359	RBM17	96	75.467	Mustela_putorius_furo
ENSELUG00000006440	rbm17	100	73.148	ENSMLUG00000025709	-	100	72.222	Myotis_lucifugus
ENSELUG00000006440	rbm17	100	75.751	ENSMLUG00000002302	-	100	75.751	Myotis_lucifugus
ENSELUG00000006440	rbm17	100	77.778	ENSNGAG00000000741	Rbm17	100	77.778	Nannospalax_galili
ENSELUG00000006440	rbm17	100	53.132	ENSNGAG00000000663	-	100	53.241	Nannospalax_galili
ENSELUG00000006440	rbm17	100	77.855	ENSNBRG00000018148	rbm17	100	77.855	Neolamprologus_brichardi
ENSELUG00000006440	rbm17	100	77.083	ENSNLEG00000033350	RBM17	94	88.793	Nomascus_leucogenys
ENSELUG00000006440	rbm17	100	72.454	ENSMEUG00000011347	RBM17	100	72.454	Notamacropus_eugenii
ENSELUG00000006440	rbm17	100	67.554	ENSOPRG00000002993	RBM17	100	67.130	Ochotona_princeps
ENSELUG00000006440	rbm17	97	59.759	ENSODEG00000007286	-	99	59.518	Octodon_degus
ENSELUG00000006440	rbm17	100	77.367	ENSODEG00000004393	RBM17	100	77.367	Octodon_degus
ENSELUG00000006440	rbm17	100	85.082	ENSONIG00000011838	rbm17	100	85.082	Oreochromis_niloticus
ENSELUG00000006440	rbm17	100	77.083	ENSOANG00000015455	RBM17	100	77.546	Ornithorhynchus_anatinus
ENSELUG00000006440	rbm17	100	83.916	ENSORLG00000028798	rbm17	100	83.916	Oryzias_latipes
ENSELUG00000006440	rbm17	100	83.217	ENSORLG00020004593	rbm17	98	83.217	Oryzias_latipes_hni
ENSELUG00000006440	rbm17	100	84.149	ENSORLG00015000033	rbm17	99	84.149	Oryzias_latipes_hsok
ENSELUG00000006440	rbm17	100	84.149	ENSOMEG00000012060	rbm17	100	84.149	Oryzias_melastigma
ENSELUG00000006440	rbm17	100	77.778	ENSOGAG00000015687	RBM17	100	77.778	Otolemur_garnettii
ENSELUG00000006440	rbm17	100	76.852	ENSOARG00000012975	RBM17	100	76.852	Ovis_aries
ENSELUG00000006440	rbm17	100	77.083	ENSPPAG00000032347	RBM17	94	88.793	Pan_paniscus
ENSELUG00000006440	rbm17	100	77.315	ENSPPRG00000010706	RBM17	100	77.315	Panthera_pardus
ENSELUG00000006440	rbm17	100	77.315	ENSPTIG00000007596	RBM17	100	77.315	Panthera_tigris_altaica
ENSELUG00000006440	rbm17	100	77.083	ENSPTRG00000002265	RBM17	94	88.793	Pan_troglodytes
ENSELUG00000006440	rbm17	100	77.083	ENSPANG00000023425	RBM17	94	88.793	Papio_anubis
ENSELUG00000006440	rbm17	100	77.064	ENSPKIG00000005048	-	100	77.294	Paramormyrops_kingsleyae
ENSELUG00000006440	rbm17	100	80.370	ENSPKIG00000025526	rbm17	100	80.370	Paramormyrops_kingsleyae
ENSELUG00000006440	rbm17	99	75.982	ENSPSIG00000012332	RBM17	99	75.982	Pelodiscus_sinensis
ENSELUG00000006440	rbm17	100	77.855	ENSPMGG00000007980	rbm17	100	77.189	Periophthalmus_magnuspinnatus
ENSELUG00000006440	rbm17	100	77.778	ENSPEMG00000014320	Rbm17	100	77.778	Peromyscus_maniculatus_bairdii
ENSELUG00000006440	rbm17	100	76.959	ENSPCIG00000019260	-	100	76.037	Phascolarctos_cinereus
ENSELUG00000006440	rbm17	100	85.315	ENSPFOG00000013271	rbm17	100	85.315	Poecilia_formosa
ENSELUG00000006440	rbm17	100	84.848	ENSPLAG00000004455	rbm17	100	84.848	Poecilia_latipinna
ENSELUG00000006440	rbm17	100	85.315	ENSPMEG00000014864	rbm17	100	85.315	Poecilia_mexicana
ENSELUG00000006440	rbm17	100	86.014	ENSPREG00000015589	rbm17	100	86.014	Poecilia_reticulata
ENSELUG00000006440	rbm17	99	57.209	ENSPPYG00000019881	-	100	56.744	Pongo_abelii
ENSELUG00000006440	rbm17	100	77.083	ENSPPYG00000002067	RBM17	100	77.083	Pongo_abelii
ENSELUG00000006440	rbm17	83	54.489	ENSPPYG00000019042	-	100	53.824	Pongo_abelii
ENSELUG00000006440	rbm17	100	70.139	ENSPCAG00000016879	RBM17	100	70.139	Procavia_capensis
ENSELUG00000006440	rbm17	100	77.315	ENSPCOG00000027881	RBM17	100	77.315	Propithecus_coquereli
ENSELUG00000006440	rbm17	100	69.676	ENSPVAG00000015499	RBM17	100	68.981	Pteropus_vampyrus
ENSELUG00000006440	rbm17	100	72.261	ENSPNYG00000015274	rbm17	100	73.256	Pundamilia_nyererei
ENSELUG00000006440	rbm17	100	83.916	ENSPNAG00000030046	rbm17	100	84.149	Pygocentrus_nattereri
ENSELUG00000006440	rbm17	100	77.778	ENSRNOG00000018767	Rbm17	100	77.778	Rattus_norvegicus
ENSELUG00000006440	rbm17	100	77.083	ENSRBIG00000043727	RBM17	94	88.793	Rhinopithecus_bieti
ENSELUG00000006440	rbm17	100	77.083	ENSRROG00000044142	RBM17	94	88.793	Rhinopithecus_roxellana
ENSELUG00000006440	rbm17	100	68.287	ENSSBOG00000023653	-	100	66.667	Saimiri_boliviensis_boliviensis
ENSELUG00000006440	rbm17	100	77.315	ENSSBOG00000031661	-	92	88.596	Saimiri_boliviensis_boliviensis
ENSELUG00000006440	rbm17	100	77.546	ENSSHAG00000012480	-	100	77.546	Sarcophilus_harrisii
ENSELUG00000006440	rbm17	100	79.032	ENSSFOG00015009892	rbm17	100	79.080	Scleropages_formosus
ENSELUG00000006440	rbm17	100	83.636	ENSSMAG00000012368	rbm17	100	83.636	Scophthalmus_maximus
ENSELUG00000006440	rbm17	100	85.388	ENSSDUG00000015015	rbm17	100	85.388	Seriola_dumerili
ENSELUG00000006440	rbm17	100	85.388	ENSSLDG00000014486	rbm17	100	85.388	Seriola_lalandi_dorsalis
ENSELUG00000006440	rbm17	99	77.262	ENSSPUG00000001036	RBM17	99	77.262	Sphenodon_punctatus
ENSELUG00000006440	rbm17	100	87.442	ENSSPAG00000002338	rbm17	100	87.442	Stegastes_partitus
ENSELUG00000006440	rbm17	100	76.620	ENSSSCG00000011134	RBM17	100	76.620	Sus_scrofa
ENSELUG00000006440	rbm17	100	77.083	ENSTGUG00000002013	RBM17	100	77.083	Taeniopygia_guttata
ENSELUG00000006440	rbm17	100	82.751	ENSTRUG00000010698	rbm17	100	82.751	Takifugu_rubripes
ENSELUG00000006440	rbm17	100	83.256	ENSTNIG00000006892	rbm17	100	83.256	Tetraodon_nigroviridis
ENSELUG00000006440	rbm17	90	90.909	ENSTBEG00000014686	RBM17	86	90.909	Tupaia_belangeri
ENSELUG00000006440	rbm17	90	75.835	ENSTTRG00000001344	RBM17	100	74.807	Tursiops_truncatus
ENSELUG00000006440	rbm17	100	74.186	ENSUAMG00000009499	RBM17	100	74.186	Ursus_americanus
ENSELUG00000006440	rbm17	100	77.315	ENSUMAG00000012237	RBM17	100	77.315	Ursus_maritimus
ENSELUG00000006440	rbm17	100	66.667	ENSVPAG00000005497	RBM17	100	66.667	Vicugna_pacos
ENSELUG00000006440	rbm17	100	74.419	ENSVVUG00000006780	RBM17	100	74.419	Vulpes_vulpes
ENSELUG00000006440	rbm17	99	72.960	ENSXETG00000018123	rbm17	100	72.960	Xenopus_tropicalis
ENSELUG00000006440	rbm17	100	85.315	ENSXMAG00000008674	rbm17	100	85.781	Xiphophorus_maculatus