EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000006507 (Gene tree)
Gene ID
105019368
Gene Symbol
puf60b
Alias
fe37c05|si:ch211-12p8.2|si:zc12p8.2|wu:fb33e11|wu:fe37c05|zgc:86806
Full Name
poly(U)-binding-splicing factor PUF60-like
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Plus strand
Length
10313 bases
Position
chrLG21:1928188-1938500
Accession
105019368
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000005443RRM_1PF00076.228.4e-4212
ENSELUP00000005443RRM_1PF00076.228.4e-4222
ENSELUP00000005432RRM_1PF00076.228.8e-4212
ENSELUP00000005432RRM_1PF00076.228.8e-4222
ENSELUP00000029532RRM_1PF00076.228.8e-4212
ENSELUP00000029532RRM_1PF00076.228.8e-4222
ENSELUP00000005456RRM_1PF00076.229.6e-4212
ENSELUP00000005456RRM_1PF00076.229.6e-4222
ENSELUP00000029541RRM_1PF00076.221e-4112
ENSELUP00000029541RRM_1PF00076.221e-4122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000010687-3408-ENSELUP00000005432545 (aa)-UPI000576BC52
ENSELUT00000010607-3473XM_010885501ENSELUP00000029532545 (aa)XP_010883803UPI000576BC52
ENSELUT00000010661-3346XM_020041965ENSELUP00000005443540 (aa)XP_019897524UPI0009732481
ENSELUT00000010636-3397XM_010885500ENSELUP00000005456557 (aa)XP_010883802UPI000576171C
ENSELUT00000010574-1668-ENSELUP00000029541555 (aa)--
Gene Model
Click here to download ENSELUG00000006507's gene model file
Pathways
Pathway IDPathway NameSource
els03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000006507's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000006507puf60b10085.138ENSELUG00000018443-10085.741
ENSELUG00000006507puf60b6135.294ENSELUG00000018459-8435.294
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000006507puf60b10079.286ENSG00000179950PUF6010084.038Homo_sapiens
ENSELUG00000006507puf60b10086.176ENSAPOG00000001713puf60b9988.701Acanthochromis_polyacanthus
ENSELUG00000006507puf60b9978.388ENSAMEG00000006406PUF609481.214Ailuropoda_melanoleuca
ENSELUG00000006507puf60b10073.578ENSACIG00000003263-10075.425Amphilophus_citrinellus
ENSELUG00000006507puf60b9985.846ENSACIG00000021705puf60b10088.359Amphilophus_citrinellus
ENSELUG00000006507puf60b10086.176ENSAOCG00000005395puf60b10088.931Amphiprion_ocellaris
ENSELUG00000006507puf60b10079.450ENSAOCG00000015558-10081.192Amphiprion_ocellaris
ENSELUG00000006507puf60b9872.045ENSAPEG00000001836-10072.505Amphiprion_percula
ENSELUG00000006507puf60b10082.593ENSAPEG00000011923puf60b9983.239Amphiprion_percula
ENSELUG00000006507puf60b10086.355ENSATEG00000001730puf60b9988.889Anabas_testudineus
ENSELUG00000006507puf60b10077.514ENSATEG00000006303-10079.439Anabas_testudineus
ENSELUG00000006507puf60b9981.136ENSAPLG00000010150PUF6010084.030Anas_platyrhynchos
ENSELUG00000006507puf60b9980.769ENSACAG00000001645PUF609684.321Anolis_carolinensis
ENSELUG00000006507puf60b9980.183ENSANAG00000018626PUF6010083.846Aotus_nancymaae
ENSELUG00000006507puf60b9985.846ENSACLG00000004462puf60b10088.359Astatotilapia_calliptera
ENSELUG00000006507puf60b9976.449ENSAMXG00000041030puf60b10077.180Astyanax_mexicanus
ENSELUG00000006507puf60b9983.146ENSAMXG00000036570puf60a10082.585Astyanax_mexicanus
ENSELUG00000006507puf60b10079.643ENSBTAG00000037493PUF609983.650Bos_taurus
ENSELUG00000006507puf60b7847.516WBGene00004389rnp-69049.080Caenorhabditis_elegans
ENSELUG00000006507puf60b10079.286ENSCJAG00000021485PUF6010082.022Callithrix_jacchus
ENSELUG00000006507puf60b9980.037ENSCAFG00000001400PUF609383.112Canis_familiaris
ENSELUG00000006507puf60b10079.464ENSCAFG00020018754PUF6010082.210Canis_lupus_dingo
ENSELUG00000006507puf60b9980.586ENSCHIG00000001618PUF608783.681Capra_hircus
ENSELUG00000006507puf60b10079.464ENSTSYG00000011912PUF6010084.231Carlito_syrichta
ENSELUG00000006507puf60b9975.818ENSCPOG00000014613PUF609478.531Cavia_porcellus
ENSELUG00000006507puf60b10079.464ENSCCAG00000007744PUF6010082.210Cebus_capucinus
ENSELUG00000006507puf60b10079.286ENSCATG00000035405PUF609883.270Cercocebus_atys
ENSELUG00000006507puf60b9980.586ENSCLAG00000009154PUF609383.681Chinchilla_lanigera
ENSELUG00000006507puf60b9980.220ENSCSAG00000008878PUF6010084.038Chlorocebus_sabaeus
ENSELUG00000006507puf60b9981.136ENSCPBG00000005595PUF609983.083Chrysemys_picta_bellii
ENSELUG00000006507puf60b9857.529ENSCING00000008436-9549.133Ciona_intestinalis
ENSELUG00000006507puf60b6555.028ENSCING00000002156-8757.396Ciona_intestinalis
ENSELUG00000006507puf60b9560.776ENSCSAVG00000004765-9660.776Ciona_savignyi
ENSELUG00000006507puf60b9752.834ENSCSAVG00000001385-9953.817Ciona_savignyi
ENSELUG00000006507puf60b8278.076ENSCANG00000041843PUF6010082.660Colobus_angolensis_palliatus
ENSELUG00000006507puf60b9980.586ENSCGRG00001017442Puf609383.681Cricetulus_griseus_chok1gshd
ENSELUG00000006507puf60b9980.586ENSCGRG00000003717Puf609383.681Cricetulus_griseus_crigri
ENSELUG00000006507puf60b9971.534ENSCSEG00000014845-9471.841Cynoglossus_semilaevis
ENSELUG00000006507puf60b9986.397ENSCSEG00000019887puf60b9686.339Cynoglossus_semilaevis
ENSELUG00000006507puf60b9985.478ENSCVAG00000009386puf60b10087.977Cyprinodon_variegatus
ENSELUG00000006507puf60b9275.952ENSCVAG00000001560-9879.245Cyprinodon_variegatus
ENSELUG00000006507puf60b10077.536ENSDARG00000001241puf60b10097.638Danio_rerio
ENSELUG00000006507puf60b10082.214ENSDARG00000032175puf60a10091.949Danio_rerio
ENSELUG00000006507puf60b9966.357ENSDNOG00000043278PUF609069.591Dasypus_novemcinctus
ENSELUG00000006507puf60b9980.769ENSDORG00000004585Puf609583.871Dipodomys_ordii
ENSELUG00000006507puf60b9749.066FBgn0028577hfp7263.971Drosophila_melanogaster
ENSELUG00000006507puf60b9565.825ENSEBUG00000005470-9263.465Eptatretus_burgeri
ENSELUG00000006507puf60b9859.052ENSEBUG00000014291puf60b8460.445Eptatretus_burgeri
ENSELUG00000006507puf60b10079.464ENSEASG00005009695PUF6010082.210Equus_asinus_asinus
ENSELUG00000006507puf60b9980.403ENSECAG00000024681PUF609783.460Equus_caballus
ENSELUG00000006507puf60b10079.464ENSFCAG00000001045PUF6010084.231Felis_catus
ENSELUG00000006507puf60b9971.795ENSFALG00000001136PUF609874.573Ficedula_albicollis
ENSELUG00000006507puf60b9980.403ENSFDAG00000017177PUF609383.491Fukomys_damarensis
ENSELUG00000006507puf60b9677.778ENSFHEG00000021687PUF6010081.542Fundulus_heteroclitus
ENSELUG00000006507puf60b10085.278ENSFHEG00000020046puf60b10087.977Fundulus_heteroclitus
ENSELUG00000006507puf60b9974.449ENSGMOG00000006392puf60b10075.514Gadus_morhua
ENSELUG00000006507puf60b6386.494ENSGALG00000039901PUF609485.920Gallus_gallus
ENSELUG00000006507puf60b10075.137ENSGAFG00000004334-10078.161Gambusia_affinis
ENSELUG00000006507puf60b10085.278ENSGAFG00000021040puf60b10087.977Gambusia_affinis
ENSELUG00000006507puf60b9975.184ENSGACG00000004717puf60b10075.651Gasterosteus_aculeatus
ENSELUG00000006507puf60b10067.276ENSGACG00000001484-10070.135Gasterosteus_aculeatus
ENSELUG00000006507puf60b9981.136ENSGAGG00000013289PUF609383.083Gopherus_agassizii
ENSELUG00000006507puf60b10079.286ENSGGOG00000004646PUF609982.830Gorilla_gorilla
ENSELUG00000006507puf60b10085.458ENSHBUG00000015118puf60b10088.359Haplochromis_burtoni
ENSELUG00000006507puf60b10078.532ENSHBUG00000009634-10079.740Haplochromis_burtoni
ENSELUG00000006507puf60b9980.403ENSHGLG00000006111PUF609383.491Heterocephalus_glaber_female
ENSELUG00000006507puf60b9980.403ENSHGLG00100012362PUF609383.491Heterocephalus_glaber_male
ENSELUG00000006507puf60b9864.432ENSHCOG00000000378-9965.736Hippocampus_comes
ENSELUG00000006507puf60b9988.419ENSHCOG00000015541puf60b10087.273Hippocampus_comes
ENSELUG00000006507puf60b10077.117ENSIPUG00000004660puf60b10079.135Ictalurus_punctatus
ENSELUG00000006507puf60b10081.522ENSIPUG00000002453puf60a10083.302Ictalurus_punctatus
ENSELUG00000006507puf60b9980.586ENSSTOG00000025037PUF609483.681Ictidomys_tridecemlineatus
ENSELUG00000006507puf60b9980.586ENSJJAG00000001076Puf609383.681Jaculus_jaculus
ENSELUG00000006507puf60b9974.910ENSKMAG00000010106-10076.679Kryptolebias_marmoratus
ENSELUG00000006507puf60b9985.662ENSKMAG00000016745puf60b10088.168Kryptolebias_marmoratus
ENSELUG00000006507puf60b9992.208ENSLBEG00000012505puf60b10092.208Labrus_bergylta
ENSELUG00000006507puf60b7373.028ENSLACG00000005456PUF609976.839Latimeria_chalumnae
ENSELUG00000006507puf60b10084.066ENSLOCG00000010106puf60b10085.847Lepisosteus_oculatus
ENSELUG00000006507puf60b9979.670ENSLAFG00000022929PUF609482.922Loxodonta_africana
ENSELUG00000006507puf60b10079.286ENSMFAG00000043373PUF609983.270Macaca_fascicularis
ENSELUG00000006507puf60b10079.286ENSMMUG00000013558PUF609982.830Macaca_mulatta
ENSELUG00000006507puf60b10079.286ENSMNEG00000031099PUF609883.270Macaca_nemestrina
ENSELUG00000006507puf60b9980.220ENSMLEG00000040009PUF6010084.038Mandrillus_leucophaeus
ENSELUG00000006507puf60b9987.500ENSMAMG00000010394puf60b10087.132Mastacembelus_armatus
ENSELUG00000006507puf60b10078.755ENSMAMG00000019476-10080.483Mastacembelus_armatus
ENSELUG00000006507puf60b10078.532ENSMZEG00005019425-10079.740Maylandia_zebra
ENSELUG00000006507puf60b9985.846ENSMZEG00005018515puf60b10088.359Maylandia_zebra
ENSELUG00000006507puf60b9981.136ENSMGAG00000013070PUF609983.585Meleagris_gallopavo
ENSELUG00000006507puf60b6785.175ENSMAUG00000014267-9084.636Mesocricetus_auratus
ENSELUG00000006507puf60b9664.272ENSMAUG00000018549-9567.735Mesocricetus_auratus
ENSELUG00000006507puf60b10079.464ENSMICG00000012226PUF6010083.019Microcebus_murinus
ENSELUG00000006507puf60b9980.586ENSMOCG00000018780Puf609483.681Microtus_ochrogaster
ENSELUG00000006507puf60b10070.166ENSMMOG00000018059-9973.696Mola_mola
ENSELUG00000006507puf60b9987.132ENSMMOG00000004217puf60b10089.122Mola_mola
ENSELUG00000006507puf60b9980.220ENSMODG00000009161PUF609583.302Monodelphis_domestica
ENSELUG00000006507puf60b10078.062ENSMALG00000000200-10079.330Monopterus_albus
ENSELUG00000006507puf60b10081.329ENSMALG00000006797puf60b9981.544Monopterus_albus
ENSELUG00000006507puf60b9980.769MGP_CAROLIEiJ_G0019910Puf609383.871Mus_caroli
ENSELUG00000006507puf60b9980.769ENSMUSG00000002524Puf609383.871Mus_musculus
ENSELUG00000006507puf60b9980.769MGP_PahariEiJ_G0019920Puf609383.871Mus_pahari
ENSELUG00000006507puf60b9980.769MGP_SPRETEiJ_G0020812Puf609383.871Mus_spretus
ENSELUG00000006507puf60b9980.403ENSMPUG00000008137PUF609383.491Mustela_putorius_furo
ENSELUG00000006507puf60b9979.853ENSMLUG00000000238-9482.922Myotis_lucifugus
ENSELUG00000006507puf60b10075.506ENSMLUG00000013032-9877.186Myotis_lucifugus
ENSELUG00000006507puf60b9980.586ENSNGAG00000000712Puf6010084.423Nannospalax_galili
ENSELUG00000006507puf60b8485.746ENSNBRG00000013047puf60b9785.981Neolamprologus_brichardi
ENSELUG00000006507puf60b10078.349ENSNBRG00000017223-10079.516Neolamprologus_brichardi
ENSELUG00000006507puf60b9980.220ENSNLEG00000002156PUF609982.830Nomascus_leucogenys
ENSELUG00000006507puf60b6893.863ENSOPRG00000002147PUF607293.863Ochotona_princeps
ENSELUG00000006507puf60b9859.626ENSODEG00000015513-9860.721Octodon_degus
ENSELUG00000006507puf60b7284.375ENSODEG00000014024-9085.185Octodon_degus
ENSELUG00000006507puf60b9985.846ENSONIG00000006247puf60b10087.222Oreochromis_niloticus
ENSELUG00000006507puf60b10078.349ENSONIG00000014030-9979.592Oreochromis_niloticus
ENSELUG00000006507puf60b7995.982ENSOANG00000006962PUF608593.991Ornithorhynchus_anatinus
ENSELUG00000006507puf60b10084.919ENSORLG00000012279puf60b10087.786Oryzias_latipes
ENSELUG00000006507puf60b9978.000ENSORLG00000028655-9980.414Oryzias_latipes
ENSELUG00000006507puf60b10084.919ENSORLG00020007333puf6010087.786Oryzias_latipes_hni
ENSELUG00000006507puf60b9978.571ENSORLG00020018144-9980.148Oryzias_latipes_hni
ENSELUG00000006507puf60b10085.817ENSORLG00015007718puf60b10087.452Oryzias_latipes_hsok
ENSELUG00000006507puf60b9978.755ENSORLG00015016833-9979.963Oryzias_latipes_hsok
ENSELUG00000006507puf60b10086.535ENSOMEG00000001643puf60b10086.176Oryzias_melastigma
ENSELUG00000006507puf60b9978.755ENSOMEG00000022185-9980.705Oryzias_melastigma
ENSELUG00000006507puf60b9980.586ENSOGAG00000006259PUF609483.681Otolemur_garnettii
ENSELUG00000006507puf60b9581.698ENSOARG00000016235PUF609981.784Ovis_aries
ENSELUG00000006507puf60b10079.286ENSPPAG00000029933PUF609982.397Pan_paniscus
ENSELUG00000006507puf60b10079.464ENSPPRG00000003257PUF6010084.231Panthera_pardus
ENSELUG00000006507puf60b9979.026ENSPTIG00000009795PUF609981.179Panthera_tigris_altaica
ENSELUG00000006507puf60b10079.286ENSPTRG00000020670PUF609982.397Pan_troglodytes
ENSELUG00000006507puf60b9980.220ENSPTRG00000043963-9982.830Pan_troglodytes
ENSELUG00000006507puf60b10079.286ENSPANG00000021936PUF609883.270Papio_anubis
ENSELUG00000006507puf60b10083.842ENSPKIG00000012204puf60b10087.380Paramormyrops_kingsleyae
ENSELUG00000006507puf60b10084.037ENSPKIG00000004295puf60a10086.667Paramormyrops_kingsleyae
ENSELUG00000006507puf60b9980.769ENSPSIG00000004679PUF609983.365Pelodiscus_sinensis
ENSELUG00000006507puf60b10084.492ENSPMGG00000013444puf60b10086.578Periophthalmus_magnuspinnatus
ENSELUG00000006507puf60b9980.586ENSPEMG00000008820Puf609383.681Peromyscus_maniculatus_bairdii
ENSELUG00000006507puf60b9981.967ENSPCIG00000020270PUF609983.939Phascolarctos_cinereus
ENSELUG00000006507puf60b10076.234ENSPFOG00000011118-10079.026Poecilia_formosa
ENSELUG00000006507puf60b10085.278ENSPFOG00000019217puf60b9984.557Poecilia_formosa
ENSELUG00000006507puf60b9985.662ENSPLAG00000010754puf60b10087.977Poecilia_latipinna
ENSELUG00000006507puf60b10076.782ENSPLAG00000017025-9577.879Poecilia_latipinna
ENSELUG00000006507puf60b10085.278ENSPMEG00000000838puf60b10087.977Poecilia_mexicana
ENSELUG00000006507puf60b10076.600ENSPMEG00000009767-9379.330Poecilia_mexicana
ENSELUG00000006507puf60b10087.074ENSPREG00000005440puf60b10086.715Poecilia_reticulata
ENSELUG00000006507puf60b8276.682ENSPPYG00000018951-9580.998Pongo_abelii
ENSELUG00000006507puf60b8278.076ENSPCAG00000014837PUF6010082.660Procavia_capensis
ENSELUG00000006507puf60b10079.286ENSPCOG00000027981PUF609983.270Propithecus_coquereli
ENSELUG00000006507puf60b9996.835ENSPVAG00000016167PUF608196.835Pteropus_vampyrus
ENSELUG00000006507puf60b10078.532ENSPNYG00000004273-10079.740Pundamilia_nyererei
ENSELUG00000006507puf60b9985.846ENSPNYG00000002556puf60b10088.359Pundamilia_nyererei
ENSELUG00000006507puf60b9976.909ENSPNAG00000019415puf60b9077.273Pygocentrus_nattereri
ENSELUG00000006507puf60b9883.271ENSPNAG00000019909puf60a9982.863Pygocentrus_nattereri
ENSELUG00000006507puf60b9980.769ENSRNOG00000009960Puf609383.871Rattus_norvegicus
ENSELUG00000006507puf60b10079.286ENSRBIG00000035274PUF609982.830Rhinopithecus_bieti
ENSELUG00000006507puf60b10079.286ENSRROG00000029360PUF6010082.707Rhinopithecus_roxellana
ENSELUG00000006507puf60b9978.938ENSSBOG00000027089PUF609881.939Saimiri_boliviensis_boliviensis
ENSELUG00000006507puf60b9079.150ENSSHAG00000006668PUF609082.526Sarcophilus_harrisii
ENSELUG00000006507puf60b9976.673ENSSFOG00015019619puf60b9982.897Scleropages_formosus
ENSELUG00000006507puf60b10080.859ENSSFOG00015019371puf60a9886.000Scleropages_formosus
ENSELUG00000006507puf60b7296.246ENSSMAG00000016381puf60b7596.246Scophthalmus_maximus
ENSELUG00000006507puf60b9988.603ENSSDUG00000009935puf60b9988.235Seriola_dumerili
ENSELUG00000006507puf60b9778.450ENSSDUG00000007048-9779.846Seriola_dumerili
ENSELUG00000006507puf60b10076.407ENSSLDG00000007366-10078.531Seriola_lalandi_dorsalis
ENSELUG00000006507puf60b10088.869ENSSLDG00000024011puf60b10088.787Seriola_lalandi_dorsalis
ENSELUG00000006507puf60b6671.709ENSSPUG00000013518PUF609274.052Sphenodon_punctatus
ENSELUG00000006507puf60b9977.656ENSSPAG00000020285-10081.143Stegastes_partitus
ENSELUG00000006507puf60b10088.689ENSSPAG00000012144puf60b10088.603Stegastes_partitus
ENSELUG00000006507puf60b9980.403ENSSSCG00000038800PUF609880.418Sus_scrofa
ENSELUG00000006507puf60b9978.165ENSTGUG00000012797-10080.952Taeniopygia_guttata
ENSELUG00000006507puf60b10087.612ENSTRUG00000005420puf60b10087.500Takifugu_rubripes
ENSELUG00000006507puf60b9876.091ENSTRUG00000008843-10076.879Takifugu_rubripes
ENSELUG00000006507puf60b9985.846ENSTNIG00000013675puf60b10088.324Tetraodon_nigroviridis
ENSELUG00000006507puf60b10074.495ENSTNIG00000003069-10078.517Tetraodon_nigroviridis
ENSELUG00000006507puf60b5777.994ENSTBEG00000002751-9781.017Tupaia_belangeri
ENSELUG00000006507puf60b7860.638ENSTBEG00000001899-10064.857Tupaia_belangeri
ENSELUG00000006507puf60b9978.755ENSTTRG00000017088PUF6010083.269Tursiops_truncatus
ENSELUG00000006507puf60b10079.464ENSUAMG00000024917PUF6010082.210Ursus_americanus
ENSELUG00000006507puf60b9975.641ENSUMAG00000000272PUF609478.368Ursus_maritimus
ENSELUG00000006507puf60b9980.403ENSVVUG00000022527PUF6010084.231Vulpes_vulpes
ENSELUG00000006507puf60b9979.670ENSXETG00000012469puf6010081.086Xenopus_tropicalis
ENSELUG00000006507puf60b9885.199ENSXCOG00000012355puf60b10084.733Xiphophorus_couchianus
ENSELUG00000006507puf60b10085.278ENSXMAG00000001862puf60b10087.977Xiphophorus_maculatus
ENSELUG00000006507puf60b9976.262ENSXMAG00000010507-9976.894Xiphophorus_maculatus

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