EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000006556 (Gene tree)
Gene ID: 105028523
Gene Symbol: fbxo18
Alias: si:dkey-22l11.2
Full Name: F-box DNA helicase 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 22174 bases
Position: chrLG23:8591437-8613610
Accession: 105028523
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000029533	UvrD-helicase	PF00580.21	3.7e-12	1	1
ENSELUP00000029583	UvrD-helicase	PF00580.21	4.4e-12	1	1
ENSELUP00000029572	UvrD-helicase	PF00580.21	4.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000010472	-	4587	-	ENSELUP00000029583	984 (aa)	-	-
ENSELUT00000010599	-	4188	-	ENSELUP00000029533	943 (aa)	-	-
ENSELUT00000010555	-	4362	XM_010901302	ENSELUP00000029549	1001 (aa)	XP_010899604	UPI0005767EB8
ENSELUT00000010503	-	4449	XM_010901301	ENSELUP00000029572	1030 (aa)	XP_010899603	UPI00057766DC

Gene Model

Click here to download ENSELUG00000006556's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000006556's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000006556	fbxo18	99	52.174	ENSG00000134452	FBH1	88	50.619	Homo_sapiens
ENSELUG00000006556	fbxo18	97	51.974	ENSAPOG00000007042	fbxo18	97	51.845	Acanthochromis_polyacanthus
ENSELUG00000006556	fbxo18	99	51.812	ENSAMEG00000002043	FBH1	95	51.812	Ailuropoda_melanoleuca
ENSELUG00000006556	fbxo18	99	49.285	ENSACIG00000006171	fbxo18	99	49.472	Amphilophus_citrinellus
ENSELUG00000006556	fbxo18	100	51.515	ENSAOCG00000014826	fbxo18	100	51.331	Amphiprion_ocellaris
ENSELUG00000006556	fbxo18	100	51.421	ENSAPEG00000022846	fbxo18	100	51.237	Amphiprion_percula
ENSELUG00000006556	fbxo18	100	54.924	ENSATEG00000004547	fbxo18	100	53.482	Anabas_testudineus
ENSELUG00000006556	fbxo18	97	46.245	ENSAPLG00000009754	FBH1	99	41.682	Anas_platyrhynchos
ENSELUG00000006556	fbxo18	91	46.002	ENSACAG00000002729	FBH1	84	45.961	Anolis_carolinensis
ENSELUG00000006556	fbxo18	100	51.812	ENSANAG00000032436	FBH1	88	50.506	Aotus_nancymaae
ENSELUG00000006556	fbxo18	100	51.973	ENSACLG00000004266	fbxo18	97	55.098	Astatotilapia_calliptera
ENSELUG00000006556	fbxo18	89	60.345	ENSAMXG00000020772	fbxo18	98	60.345	Astyanax_mexicanus
ENSELUG00000006556	fbxo18	99	52.174	ENSBTAG00000004147	FBH1	95	52.174	Bos_taurus
ENSELUG00000006556	fbxo18	99	51.812	ENSCJAG00000020531	FBH1	88	50.394	Callithrix_jacchus
ENSELUG00000006556	fbxo18	90	50.556	ENSCAFG00000005218	FBH1	88	51.661	Canis_familiaris
ENSELUG00000006556	fbxo18	90	50.556	ENSCAFG00020005396	FBH1	88	51.661	Canis_lupus_dingo
ENSELUG00000006556	fbxo18	99	51.812	ENSCHIG00000016303	FBH1	95	51.812	Capra_hircus
ENSELUG00000006556	fbxo18	87	49.254	ENSCPOG00000010580	FBH1	81	49.367	Cavia_porcellus
ENSELUG00000006556	fbxo18	99	51.812	ENSCCAG00000023218	FBH1	95	51.812	Cebus_capucinus
ENSELUG00000006556	fbxo18	99	52.174	ENSCATG00000035430	FBH1	80	63.636	Cercocebus_atys
ENSELUG00000006556	fbxo18	99	45.320	ENSCLAG00000008089	FBH1	82	51.598	Chinchilla_lanigera
ENSELUG00000006556	fbxo18	87	51.487	ENSCSAG00000013644	FBH1	88	51.606	Chlorocebus_sabaeus
ENSELUG00000006556	fbxo18	70	51.345	ENSCHOG00000007603	FBH1	51	51.345	Choloepus_hoffmanni
ENSELUG00000006556	fbxo18	99	52.174	ENSCPBG00000019260	FBH1	94	52.174	Chrysemys_picta_bellii
ENSELUG00000006556	fbxo18	99	52.536	ENSCANG00000023461	FBH1	88	50.844	Colobus_angolensis_palliatus
ENSELUG00000006556	fbxo18	99	51.812	ENSCGRG00001018795	Fbh1	85	49.512	Cricetulus_griseus_chok1gshd
ENSELUG00000006556	fbxo18	99	51.812	ENSCGRG00000008471	Fbh1	85	49.512	Cricetulus_griseus_crigri
ENSELUG00000006556	fbxo18	74	66.667	ENSCSEG00000018212	fbxo18	78	66.667	Cynoglossus_semilaevis
ENSELUG00000006556	fbxo18	83	50.277	ENSCVAG00000006828	fbxo18	99	50.442	Cyprinodon_variegatus
ENSELUG00000006556	fbxo18	100	58.394	ENSDARG00000062983	fbxo18	100	57.748	Danio_rerio
ENSELUG00000006556	fbxo18	89	49.944	ENSETEG00000019856	FBH1	81	50.745	Echinops_telfairi
ENSELUG00000006556	fbxo18	99	53.261	ENSEASG00005019192	FBH1	85	49.621	Equus_asinus_asinus
ENSELUG00000006556	fbxo18	99	53.261	ENSECAG00000006839	FBH1	85	49.621	Equus_caballus
ENSELUG00000006556	fbxo18	79	49.098	ENSEEUG00000000461	FBH1	77	52.231	Erinaceus_europaeus
ENSELUG00000006556	fbxo18	99	52.174	ENSFCAG00000009004	FBH1	80	51.546	Felis_catus
ENSELUG00000006556	fbxo18	99	51.449	ENSFDAG00000009830	FBH1	95	51.449	Fukomys_damarensis
ENSELUG00000006556	fbxo18	100	50.068	ENSFHEG00000007533	fbxo18	99	49.543	Fundulus_heteroclitus
ENSELUG00000006556	fbxo18	95	47.907	ENSGMOG00000010594	-	91	49.239	Gadus_morhua
ENSELUG00000006556	fbxo18	98	43.846	ENSGALG00000008162	FBH1	99	42.289	Gallus_gallus
ENSELUG00000006556	fbxo18	100	50.904	ENSGAFG00000004166	fbxo18	99	50.560	Gambusia_affinis
ENSELUG00000006556	fbxo18	97	52.150	ENSGACG00000019171	fbxo18	98	51.866	Gasterosteus_aculeatus
ENSELUG00000006556	fbxo18	99	51.812	ENSGAGG00000021773	FBH1	94	51.812	Gopherus_agassizii
ENSELUG00000006556	fbxo18	99	52.174	ENSGGOG00000013326	FBXO18	88	50.731	Gorilla_gorilla
ENSELUG00000006556	fbxo18	100	51.907	ENSHBUG00000016673	fbxo18	99	51.099	Haplochromis_burtoni
ENSELUG00000006556	fbxo18	99	52.174	ENSHGLG00000015581	FBXO18	83	50.501	Heterocephalus_glaber_female
ENSELUG00000006556	fbxo18	99	52.174	ENSHGLG00100009896	FBXO18	83	50.501	Heterocephalus_glaber_male
ENSELUG00000006556	fbxo18	57	50.000	ENSHCOG00000010937	-	75	50.000	Hippocampus_comes
ENSELUG00000006556	fbxo18	89	64.571	ENSIPUG00000019144	fbxo18	96	58.679	Ictalurus_punctatus
ENSELUG00000006556	fbxo18	99	51.812	ENSSTOG00000006496	FBH1	99	45.093	Ictidomys_tridecemlineatus
ENSELUG00000006556	fbxo18	99	51.503	ENSKMAG00000021437	fbxo18	96	49.539	Kryptolebias_marmoratus
ENSELUG00000006556	fbxo18	100	52.820	ENSLBEG00000023717	fbxo18	100	51.937	Labrus_bergylta
ENSELUG00000006556	fbxo18	76	39.057	ENSLACG00000013504	FBH1	99	39.078	Latimeria_chalumnae
ENSELUG00000006556	fbxo18	100	58.909	ENSLOCG00000015655	fbxo18	99	58.909	Lepisosteus_oculatus
ENSELUG00000006556	fbxo18	99	51.812	ENSLAFG00000013105	FBH1	82	51.812	Loxodonta_africana
ENSELUG00000006556	fbxo18	100	52.174	ENSMMUG00000015143	FBH1	88	50.844	Macaca_mulatta
ENSELUG00000006556	fbxo18	99	51.812	ENSMNEG00000043475	FBH1	88	50.731	Macaca_nemestrina
ENSELUG00000006556	fbxo18	99	52.174	ENSMLEG00000035307	FBH1	88	50.731	Mandrillus_leucophaeus
ENSELUG00000006556	fbxo18	100	53.448	ENSMAMG00000000527	fbxo18	100	51.398	Mastacembelus_armatus
ENSELUG00000006556	fbxo18	100	51.973	ENSMZEG00005015202	fbxo18	99	51.052	Maylandia_zebra
ENSELUG00000006556	fbxo18	89	48.571	ENSMGAG00000003231	FBH1	99	43.093	Meleagris_gallopavo
ENSELUG00000006556	fbxo18	99	52.536	ENSMICG00000009646	FBH1	98	51.508	Microcebus_murinus
ENSELUG00000006556	fbxo18	97	52.890	ENSMMOG00000010268	fbxo18	98	51.270	Mola_mola
ENSELUG00000006556	fbxo18	88	49.546	ENSMODG00000018516	FBH1	88	49.656	Monodelphis_domestica
ENSELUG00000006556	fbxo18	97	54.294	ENSMALG00000010440	fbxo18	98	53.714	Monopterus_albus
ENSELUG00000006556	fbxo18	99	51.812	MGP_CAROLIEiJ_G0023178	Fbh1	95	51.812	Mus_caroli
ENSELUG00000006556	fbxo18	99	51.812	ENSMUSG00000058594	Fbh1	82	51.432	Mus_musculus
ENSELUG00000006556	fbxo18	99	51.812	MGP_PahariEiJ_G0019237	Fbh1	82	51.432	Mus_pahari
ENSELUG00000006556	fbxo18	99	52.174	MGP_SPRETEiJ_G0024095	Fbh1	82	51.546	Mus_spretus
ENSELUG00000006556	fbxo18	88	51.471	ENSMPUG00000016343	FBH1	82	51.720	Mustela_putorius_furo
ENSELUG00000006556	fbxo18	99	44.928	ENSMLUG00000000133	FBH1	82	48.686	Myotis_lucifugus
ENSELUG00000006556	fbxo18	99	52.416	ENSNBRG00000018212	fbxo18	99	50.287	Neolamprologus_brichardi
ENSELUG00000006556	fbxo18	99	52.174	ENSNLEG00000011537	FBH1	88	50.506	Nomascus_leucogenys
ENSELUG00000006556	fbxo18	66	46.903	ENSMEUG00000000256	-	61	46.602	Notamacropus_eugenii
ENSELUG00000006556	fbxo18	99	52.206	ENSOPRG00000002898	FBH1	92	52.206	Ochotona_princeps
ENSELUG00000006556	fbxo18	99	52.174	ENSODEG00000004201	FBH1	83	50.887	Octodon_degus
ENSELUG00000006556	fbxo18	100	52.109	ENSONIG00000011830	fbxo18	99	55.835	Oreochromis_niloticus
ENSELUG00000006556	fbxo18	99	50.362	ENSOANG00000015459	FBH1	95	50.362	Ornithorhynchus_anatinus
ENSELUG00000006556	fbxo18	99	51.590	ENSOCUG00000006237	FBH1	95	51.590	Oryctolagus_cuniculus
ENSELUG00000006556	fbxo18	97	50.094	ENSORLG00000026493	fbxo18	97	49.763	Oryzias_latipes
ENSELUG00000006556	fbxo18	97	50.283	ENSORLG00020004678	fbxo18	97	49.953	Oryzias_latipes_hni
ENSELUG00000006556	fbxo18	97	50.000	ENSORLG00015001917	fbxo18	97	49.811	Oryzias_latipes_hsok
ENSELUG00000006556	fbxo18	97	49.660	ENSOMEG00000011975	fbxo18	97	50.000	Oryzias_melastigma
ENSELUG00000006556	fbxo18	99	53.623	ENSOGAG00000015682	FBH1	82	51.835	Otolemur_garnettii
ENSELUG00000006556	fbxo18	99	51.449	ENSOARG00000012605	FBH1	95	51.449	Ovis_aries
ENSELUG00000006556	fbxo18	99	52.174	ENSPPAG00000043946	FBH1	88	50.731	Pan_paniscus
ENSELUG00000006556	fbxo18	99	52.174	ENSPPRG00000009687	FBH1	79	51.550	Panthera_pardus
ENSELUG00000006556	fbxo18	99	52.174	ENSPTIG00000020396	FBH1	88	51.550	Panthera_tigris_altaica
ENSELUG00000006556	fbxo18	99	52.174	ENSPTRG00000002261	FBH1	88	50.731	Pan_troglodytes
ENSELUG00000006556	fbxo18	99	52.174	ENSPANG00000023427	FBH1	88	51.491	Papio_anubis
ENSELUG00000006556	fbxo18	100	57.912	ENSPKIG00000025529	fbxo18	100	57.912	Paramormyrops_kingsleyae
ENSELUG00000006556	fbxo18	97	53.086	ENSPSIG00000013802	FBH1	83	48.190	Pelodiscus_sinensis
ENSELUG00000006556	fbxo18	99	51.812	ENSPEMG00000023309	Fbh1	85	49.729	Peromyscus_maniculatus_bairdii
ENSELUG00000006556	fbxo18	99	48.913	ENSPCIG00000023460	FBH1	95	48.913	Phascolarctos_cinereus
ENSELUG00000006556	fbxo18	100	50.513	ENSPFOG00000005889	fbxo18	99	50.559	Poecilia_formosa
ENSELUG00000006556	fbxo18	100	50.372	ENSPLAG00000014934	fbxo18	99	50.652	Poecilia_latipinna
ENSELUG00000006556	fbxo18	100	50.419	ENSPMEG00000021117	fbxo18	99	50.466	Poecilia_mexicana
ENSELUG00000006556	fbxo18	69	55.382	ENSPREG00000017674	fbxo18	77	55.382	Poecilia_reticulata
ENSELUG00000006556	fbxo18	95	52.743	ENSPPYG00000002064	FBH1	81	51.741	Pongo_abelii
ENSELUG00000006556	fbxo18	88	46.818	ENSPCAG00000013584	FBH1	73	52.536	Procavia_capensis
ENSELUG00000006556	fbxo18	87	49.770	ENSPCOG00000011617	FBH1	78	49.770	Propithecus_coquereli
ENSELUG00000006556	fbxo18	87	50.457	ENSPVAG00000007082	FBH1	79	50.457	Pteropus_vampyrus
ENSELUG00000006556	fbxo18	99	46.968	ENSPNYG00000015327	fbxo18	99	47.379	Pundamilia_nyererei
ENSELUG00000006556	fbxo18	83	42.840	ENSPNAG00000001339	-	92	43.207	Pygocentrus_nattereri
ENSELUG00000006556	fbxo18	100	60.507	ENSPNAG00000008968	fbxo18	100	57.530	Pygocentrus_nattereri
ENSELUG00000006556	fbxo18	99	52.536	ENSRNOG00000018549	Fbh1	95	52.536	Rattus_norvegicus
ENSELUG00000006556	fbxo18	99	52.174	ENSRBIG00000038238	FBH1	88	50.731	Rhinopithecus_bieti
ENSELUG00000006556	fbxo18	99	52.174	ENSRROG00000029282	FBH1	88	51.606	Rhinopithecus_roxellana
ENSELUG00000006556	fbxo18	87	51.030	ENSSBOG00000026129	FBH1	88	51.147	Saimiri_boliviensis_boliviensis
ENSELUG00000006556	fbxo18	99	48.913	ENSSHAG00000009789	FBH1	94	48.913	Sarcophilus_harrisii
ENSELUG00000006556	fbxo18	100	57.627	ENSSFOG00015023855	fbxo18	98	55.419	Scleropages_formosus
ENSELUG00000006556	fbxo18	94	53.830	ENSSMAG00000012330	fbxo18	98	53.696	Scophthalmus_maximus
ENSELUG00000006556	fbxo18	97	53.137	ENSSDUG00000014911	fbxo18	99	52.227	Seriola_dumerili
ENSELUG00000006556	fbxo18	94	49.545	ENSSLDG00000014394	fbxo18	99	49.544	Seriola_lalandi_dorsalis
ENSELUG00000006556	fbxo18	99	44.262	ENSSPUG00000001370	FBH1	98	51.311	Sphenodon_punctatus
ENSELUG00000006556	fbxo18	97	53.716	ENSSPAG00000002282	fbxo18	98	54.092	Stegastes_partitus
ENSELUG00000006556	fbxo18	87	50.917	ENSSSCG00000030030	FBH1	82	50.971	Sus_scrofa
ENSELUG00000006556	fbxo18	85	51.459	ENSTNIG00000006893	fbxo18	99	51.412	Tetraodon_nigroviridis
ENSELUG00000006556	fbxo18	85	55.474	ENSTBEG00000003595	FBH1	80	55.474	Tupaia_belangeri
ENSELUG00000006556	fbxo18	88	49.048	ENSTTRG00000001338	FBH1	79	49.259	Tursiops_truncatus
ENSELUG00000006556	fbxo18	99	51.449	ENSUAMG00000007277	FBH1	82	51.203	Ursus_americanus
ENSELUG00000006556	fbxo18	88	50.960	ENSUMAG00000012189	FBH1	88	51.203	Ursus_maritimus
ENSELUG00000006556	fbxo18	99	52.174	ENSVVUG00000006823	FBH1	89	51.601	Vulpes_vulpes
ENSELUG00000006556	fbxo18	99	51.264	ENSXETG00000018125	fbh1	93	51.264	Xenopus_tropicalis
ENSELUG00000006556	fbxo18	100	49.862	ENSXMAG00000019200	fbxo18	99	50.093	Xiphophorus_maculatus