EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000006743 (Gene tree)
Gene ID: 105017995
Gene Symbol: ddx1
Alias: si:ch211-214k9.2|si:dkey-161f12.1
Full Name: DEAD-box helicase 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 10318 bases
Position: chrLG18:24290835-24301152
Accession: 105017995
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000029698	DEAD	PF00270.29	9.1e-69	1	1
ENSELUP00000029686	DEAD	PF00270.29	9.3e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000010223	-	4037	XM_010883068	ENSELUP00000029686	741 (aa)	XP_010881370	UPI0005771EA6
ENSELUT00000010186	-	4168	-	ENSELUP00000029698	735 (aa)	-	-

Gene Model

Click here to download ENSELUG00000006743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000006743's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000006743	ddx1	53	40.984	ENSELUG00000009107	ddx5	55	40.984
ENSELUG00000006743	ddx1	53	49.020	ENSELUG00000022660	ddx6	66	49.020
ENSELUG00000006743	ddx1	56	35.484	ENSELUG00000017328	ddx4	55	35.484
ENSELUG00000006743	ddx1	56	53.571	ENSELUG00000009495	ddx47	65	48.438
ENSELUG00000006743	ddx1	53	49.020	ENSELUG00000022538	-	66	49.020
ENSELUG00000006743	ddx1	64	43.333	ENSELUG00000012963	ddx49	86	42.424
ENSELUG00000006743	ddx1	53	49.020	ENSELUG00000020545	ddx61	67	49.020
ENSELUG00000006743	ddx1	53	42.623	ENSELUG00000007424	DDX5	57	42.623
ENSELUG00000006743	ddx1	55	41.935	ENSELUG00000005585	ddx59	54	41.935

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000006743	ddx1	100	82.591	ENSG00000079785	DDX1	100	82.591	Homo_sapiens
ENSELUG00000006743	ddx1	100	86.910	ENSAPOG00000003166	ddx1	100	86.910	Acanthochromis_polyacanthus
ENSELUG00000006743	ddx1	100	81.818	ENSAMEG00000001071	DDX1	99	81.892	Ailuropoda_melanoleuca
ENSELUG00000006743	ddx1	89	85.802	ENSACIG00000017422	ddx1	99	86.412	Amphilophus_citrinellus
ENSELUG00000006743	ddx1	91	84.242	ENSAOCG00000015436	ddx1	95	87.207	Amphiprion_ocellaris
ENSELUG00000006743	ddx1	100	88.124	ENSAPEG00000007699	ddx1	100	88.124	Amphiprion_percula
ENSELUG00000006743	ddx1	94	87.124	ENSATEG00000003965	ddx1	98	86.260	Anabas_testudineus
ENSELUG00000006743	ddx1	100	81.611	ENSAPLG00000011093	DDX1	100	81.611	Anas_platyrhynchos
ENSELUG00000006743	ddx1	94	82.403	ENSACAG00000011036	DDX1	99	82.403	Anolis_carolinensis
ENSELUG00000006743	ddx1	100	82.861	ENSANAG00000037912	DDX1	100	82.861	Aotus_nancymaae
ENSELUG00000006743	ddx1	100	86.667	ENSACLG00000008850	ddx1	99	86.260	Astatotilapia_calliptera
ENSELUG00000006743	ddx1	100	89.932	ENSAMXG00000002100	ddx1	100	89.879	Astyanax_mexicanus
ENSELUG00000006743	ddx1	100	82.456	ENSBTAG00000009906	DDX1	100	82.456	Bos_taurus
ENSELUG00000006743	ddx1	98	47.011	WBGene00021938	Y55F3BR.1	98	47.011	Caenorhabditis_elegans
ENSELUG00000006743	ddx1	100	82.726	ENSCJAG00000007076	DDX1	100	82.726	Callithrix_jacchus
ENSELUG00000006743	ddx1	100	82.456	ENSCAFG00000003686	DDX1	100	82.456	Canis_familiaris
ENSELUG00000006743	ddx1	100	82.456	ENSCAFG00020026083	DDX1	100	82.456	Canis_lupus_dingo
ENSELUG00000006743	ddx1	100	82.591	ENSCHIG00000011046	DDX1	100	82.591	Capra_hircus
ENSELUG00000006743	ddx1	100	82.321	ENSTSYG00000002477	-	100	82.321	Carlito_syrichta
ENSELUG00000006743	ddx1	99	58.672	ENSTSYG00000037396	-	97	60.909	Carlito_syrichta
ENSELUG00000006743	ddx1	87	66.304	ENSCAPG00000008906	-	93	66.563	Cavia_aperea
ENSELUG00000006743	ddx1	68	80.915	ENSCPOG00000032467	-	100	80.915	Cavia_porcellus
ENSELUG00000006743	ddx1	88	79.969	ENSCPOG00000009816	-	96	79.969	Cavia_porcellus
ENSELUG00000006743	ddx1	100	82.591	ENSCCAG00000030085	DDX1	100	82.591	Cebus_capucinus
ENSELUG00000006743	ddx1	100	82.591	ENSCATG00000033924	DDX1	100	82.591	Cercocebus_atys
ENSELUG00000006743	ddx1	100	82.321	ENSCLAG00000005434	DDX1	100	82.321	Chinchilla_lanigera
ENSELUG00000006743	ddx1	100	82.591	ENSCSAG00000007883	DDX1	100	82.591	Chlorocebus_sabaeus
ENSELUG00000006743	ddx1	70	85.308	ENSCHOG00000002171	DDX1	70	85.308	Choloepus_hoffmanni
ENSELUG00000006743	ddx1	100	76.766	ENSCPBG00000013330	DDX1	99	82.343	Chrysemys_picta_bellii
ENSELUG00000006743	ddx1	100	64.777	ENSCING00000001176	-	100	64.887	Ciona_intestinalis
ENSELUG00000006743	ddx1	99	60.082	ENSCSAVG00000003028	-	99	60.082	Ciona_savignyi
ENSELUG00000006743	ddx1	100	82.591	ENSCANG00000031530	DDX1	100	82.591	Colobus_angolensis_palliatus
ENSELUG00000006743	ddx1	100	82.186	ENSCGRG00001013025	Ddx1	100	82.186	Cricetulus_griseus_chok1gshd
ENSELUG00000006743	ddx1	100	82.186	ENSCGRG00000000676	Ddx1	100	82.186	Cricetulus_griseus_crigri
ENSELUG00000006743	ddx1	100	87.483	ENSCSEG00000002630	ddx1	100	87.483	Cynoglossus_semilaevis
ENSELUG00000006743	ddx1	100	86.667	ENSCVAG00000020927	ddx1	100	86.667	Cyprinodon_variegatus
ENSELUG00000006743	ddx1	100	87.619	ENSDARG00000032117	ddx1	100	87.619	Danio_rerio
ENSELUG00000006743	ddx1	100	82.186	ENSDNOG00000006905	DDX1	100	82.186	Dasypus_novemcinctus
ENSELUG00000006743	ddx1	100	82.321	ENSDORG00000012847	Ddx1	100	82.321	Dipodomys_ordii
ENSELUG00000006743	ddx1	98	57.981	FBgn0015075	Ddx1	99	58.254	Drosophila_melanogaster
ENSELUG00000006743	ddx1	100	75.169	ENSETEG00000014259	DDX1	100	75.169	Echinops_telfairi
ENSELUG00000006743	ddx1	64	74.419	ENSEBUG00000009800	-	99	74.419	Eptatretus_burgeri
ENSELUG00000006743	ddx1	100	82.321	ENSEASG00005009335	DDX1	92	82.321	Equus_asinus_asinus
ENSELUG00000006743	ddx1	95	81.662	ENSECAG00000016396	DDX1	100	81.662	Equus_caballus
ENSELUG00000006743	ddx1	89	79.661	ENSEEUG00000001606	DDX1	89	79.661	Erinaceus_europaeus
ENSELUG00000006743	ddx1	100	82.456	ENSFCAG00000004680	DDX1	100	82.456	Felis_catus
ENSELUG00000006743	ddx1	100	81.781	ENSFALG00000008696	DDX1	100	81.781	Ficedula_albicollis
ENSELUG00000006743	ddx1	100	81.781	ENSFDAG00000021305	DDX1	100	81.781	Fukomys_damarensis
ENSELUG00000006743	ddx1	100	86.505	ENSFHEG00000008444	ddx1	100	86.505	Fundulus_heteroclitus
ENSELUG00000006743	ddx1	100	84.812	ENSGMOG00000011300	ddx1	100	84.812	Gadus_morhua
ENSELUG00000006743	ddx1	100	81.646	ENSGALG00000016461	DDX1	100	81.646	Gallus_gallus
ENSELUG00000006743	ddx1	100	86.910	ENSGAFG00000004706	ddx1	100	86.910	Gambusia_affinis
ENSELUG00000006743	ddx1	100	86.235	ENSGACG00000011162	ddx1	100	86.235	Gasterosteus_aculeatus
ENSELUG00000006743	ddx1	100	82.456	ENSGAGG00000021020	DDX1	100	82.456	Gopherus_agassizii
ENSELUG00000006743	ddx1	100	82.591	ENSGGOG00000012482	DDX1	100	82.591	Gorilla_gorilla
ENSELUG00000006743	ddx1	100	86.531	ENSHBUG00000014069	ddx1	100	86.505	Haplochromis_burtoni
ENSELUG00000006743	ddx1	100	81.916	ENSHGLG00000000801	DDX1	100	81.916	Heterocephalus_glaber_female
ENSELUG00000006743	ddx1	100	81.769	ENSHGLG00100000711	DDX1	100	81.769	Heterocephalus_glaber_male
ENSELUG00000006743	ddx1	100	87.314	ENSHCOG00000011492	ddx1	96	87.314	Hippocampus_comes
ENSELUG00000006743	ddx1	100	88.394	ENSIPUG00000003494	ddx1	100	88.394	Ictalurus_punctatus
ENSELUG00000006743	ddx1	100	82.313	ENSSTOG00000003977	DDX1	100	82.313	Ictidomys_tridecemlineatus
ENSELUG00000006743	ddx1	89	77.557	ENSJJAG00000013315	Ddx1	99	77.557	Jaculus_jaculus
ENSELUG00000006743	ddx1	100	87.584	ENSKMAG00000011340	ddx1	100	87.584	Kryptolebias_marmoratus
ENSELUG00000006743	ddx1	89	83.079	ENSLBEG00000008692	ddx1	99	83.079	Labrus_bergylta
ENSELUG00000006743	ddx1	100	81.916	ENSLACG00000010529	DDX1	100	81.916	Latimeria_chalumnae
ENSELUG00000006743	ddx1	100	85.598	ENSLOCG00000016473	ddx1	100	85.141	Lepisosteus_oculatus
ENSELUG00000006743	ddx1	100	82.585	ENSLAFG00000002213	DDX1	99	82.656	Loxodonta_africana
ENSELUG00000006743	ddx1	100	82.591	ENSMFAG00000033987	DDX1	100	82.591	Macaca_fascicularis
ENSELUG00000006743	ddx1	100	82.591	ENSMMUG00000023437	DDX1	100	82.591	Macaca_mulatta
ENSELUG00000006743	ddx1	100	82.591	ENSMNEG00000029189	DDX1	100	82.591	Macaca_nemestrina
ENSELUG00000006743	ddx1	100	82.591	ENSMLEG00000030787	DDX1	100	82.591	Mandrillus_leucophaeus
ENSELUG00000006743	ddx1	100	87.179	ENSMAMG00000015916	ddx1	100	87.179	Mastacembelus_armatus
ENSELUG00000006743	ddx1	100	86.667	ENSMZEG00005015207	ddx1	99	86.260	Maylandia_zebra
ENSELUG00000006743	ddx1	100	77.913	ENSMGAG00000014025	DDX1	100	77.913	Meleagris_gallopavo
ENSELUG00000006743	ddx1	64	94.545	ENSMAUG00000016156	Ddx1	100	94.545	Mesocricetus_auratus
ENSELUG00000006743	ddx1	100	82.051	ENSMICG00000001023	DDX1	100	82.051	Microcebus_murinus
ENSELUG00000006743	ddx1	100	82.186	ENSMOCG00000000257	Ddx1	100	82.186	Microtus_ochrogaster
ENSELUG00000006743	ddx1	89	86.870	ENSMMOG00000015397	ddx1	99	86.870	Mola_mola
ENSELUG00000006743	ddx1	100	83.401	ENSMODG00000010275	DDX1	99	83.401	Monodelphis_domestica
ENSELUG00000006743	ddx1	100	87.719	ENSMALG00000016409	ddx1	100	87.719	Monopterus_albus
ENSELUG00000006743	ddx1	100	82.321	MGP_CAROLIEiJ_G0017622	Ddx1	100	82.321	Mus_caroli
ENSELUG00000006743	ddx1	100	82.321	ENSMUSG00000037149	Ddx1	100	82.321	Mus_musculus
ENSELUG00000006743	ddx1	100	82.456	MGP_PahariEiJ_G0029378	Ddx1	100	82.456	Mus_pahari
ENSELUG00000006743	ddx1	100	82.321	MGP_SPRETEiJ_G0018464	Ddx1	97	86.275	Mus_spretus
ENSELUG00000006743	ddx1	100	82.321	ENSMPUG00000013606	DDX1	100	82.321	Mustela_putorius_furo
ENSELUG00000006743	ddx1	100	82.313	ENSMLUG00000003027	DDX1	98	82.361	Myotis_lucifugus
ENSELUG00000006743	ddx1	100	82.313	ENSNGAG00000015783	Ddx1	100	82.313	Nannospalax_galili
ENSELUG00000006743	ddx1	79	84.283	ENSNBRG00000020677	ddx1	94	84.283	Neolamprologus_brichardi
ENSELUG00000006743	ddx1	100	82.591	ENSNLEG00000014417	DDX1	100	82.591	Nomascus_leucogenys
ENSELUG00000006743	ddx1	99	81.557	ENSMEUG00000008254	DDX1	99	81.557	Notamacropus_eugenii
ENSELUG00000006743	ddx1	100	59.784	ENSOPRG00000004290	DDX1	100	59.784	Ochotona_princeps
ENSELUG00000006743	ddx1	100	82.321	ENSODEG00000000569	DDX1	100	82.321	Octodon_degus
ENSELUG00000006743	ddx1	100	86.957	ENSONIG00000000513	ddx1	100	86.927	Oreochromis_niloticus
ENSELUG00000006743	ddx1	76	81.753	ENSOANG00000005450	DDX1	99	81.753	Ornithorhynchus_anatinus
ENSELUG00000006743	ddx1	100	82.456	ENSOCUG00000007010	DDX1	100	82.456	Oryctolagus_cuniculus
ENSELUG00000006743	ddx1	100	86.775	ENSORLG00000016709	ddx1	100	86.775	Oryzias_latipes
ENSELUG00000006743	ddx1	100	86.531	ENSORLG00020003290	ddx1	100	86.531	Oryzias_latipes_hni
ENSELUG00000006743	ddx1	100	86.370	ENSORLG00015022438	ddx1	100	86.370	Oryzias_latipes_hsok
ENSELUG00000006743	ddx1	100	81.646	ENSOMEG00000017620	ddx1	100	81.646	Oryzias_melastigma
ENSELUG00000006743	ddx1	100	82.225	ENSOGAG00000008730	DDX1	100	82.225	Otolemur_garnettii
ENSELUG00000006743	ddx1	100	82.225	ENSOARG00000016369	DDX1	100	82.225	Ovis_aries
ENSELUG00000006743	ddx1	100	82.456	ENSPPAG00000027432	DDX1	100	82.456	Pan_paniscus
ENSELUG00000006743	ddx1	100	82.456	ENSPPRG00000020556	DDX1	100	82.456	Panthera_pardus
ENSELUG00000006743	ddx1	100	82.456	ENSPTIG00000008267	DDX1	100	82.456	Panthera_tigris_altaica
ENSELUG00000006743	ddx1	100	82.456	ENSPTRG00000011670	DDX1	100	82.456	Pan_troglodytes
ENSELUG00000006743	ddx1	100	82.726	ENSPANG00000025185	DDX1	100	82.726	Papio_anubis
ENSELUG00000006743	ddx1	100	84.762	ENSPKIG00000012466	ddx1	100	84.762	Paramormyrops_kingsleyae
ENSELUG00000006743	ddx1	54	79.404	ENSPSIG00000012292	DDX1	100	79.404	Pelodiscus_sinensis
ENSELUG00000006743	ddx1	100	85.714	ENSPMGG00000000782	ddx1	100	85.695	Periophthalmus_magnuspinnatus
ENSELUG00000006743	ddx1	100	82.861	ENSPEMG00000016389	Ddx1	100	82.861	Peromyscus_maniculatus_bairdii
ENSELUG00000006743	ddx1	100	76.119	ENSPMAG00000009118	-	100	76.119	Petromyzon_marinus
ENSELUG00000006743	ddx1	100	83.671	ENSPCIG00000010941	DDX1	100	83.671	Phascolarctos_cinereus
ENSELUG00000006743	ddx1	87	85.093	ENSPFOG00000006873	-	100	85.093	Poecilia_formosa
ENSELUG00000006743	ddx1	100	86.775	ENSPFOG00000011921	ddx1	100	86.775	Poecilia_formosa
ENSELUG00000006743	ddx1	100	86.640	ENSPLAG00000005939	ddx1	100	86.640	Poecilia_latipinna
ENSELUG00000006743	ddx1	100	86.775	ENSPMEG00000011140	ddx1	100	86.775	Poecilia_mexicana
ENSELUG00000006743	ddx1	100	86.640	ENSPREG00000011751	ddx1	100	86.640	Poecilia_reticulata
ENSELUG00000006743	ddx1	100	82.591	ENSPPYG00000012638	DDX1	100	82.591	Pongo_abelii
ENSELUG00000006743	ddx1	100	70.040	ENSPCAG00000001491	DDX1	100	70.040	Procavia_capensis
ENSELUG00000006743	ddx1	100	80.408	ENSPCOG00000028185	DDX1	99	80.408	Propithecus_coquereli
ENSELUG00000006743	ddx1	100	82.456	ENSPVAG00000013618	DDX1	100	82.456	Pteropus_vampyrus
ENSELUG00000006743	ddx1	100	86.531	ENSPNYG00000013839	ddx1	100	86.505	Pundamilia_nyererei
ENSELUG00000006743	ddx1	89	88.855	ENSPNAG00000017033	ddx1	97	88.855	Pygocentrus_nattereri
ENSELUG00000006743	ddx1	100	82.726	ENSRNOG00000006652	Ddx1	100	82.726	Rattus_norvegicus
ENSELUG00000006743	ddx1	100	81.646	ENSRBIG00000041664	DDX1	100	82.907	Rhinopithecus_bieti
ENSELUG00000006743	ddx1	100	82.321	ENSRROG00000031167	DDX1	100	82.321	Rhinopithecus_roxellana
ENSELUG00000006743	ddx1	100	82.726	ENSSBOG00000027577	DDX1	100	82.726	Saimiri_boliviensis_boliviensis
ENSELUG00000006743	ddx1	100	75.782	ENSSHAG00000009363	DDX1	99	75.782	Sarcophilus_harrisii
ENSELUG00000006743	ddx1	100	86.395	ENSSFOG00015014476	ddx1	100	86.370	Scleropages_formosus
ENSELUG00000006743	ddx1	100	86.235	ENSSMAG00000010094	ddx1	100	86.235	Scophthalmus_maximus
ENSELUG00000006743	ddx1	100	87.755	ENSSDUG00000012334	ddx1	100	87.719	Seriola_dumerili
ENSELUG00000006743	ddx1	100	87.619	ENSSLDG00000025345	ddx1	100	87.584	Seriola_lalandi_dorsalis
ENSELUG00000006743	ddx1	100	73.197	ENSSARG00000004536	DDX1	100	73.197	Sorex_araneus
ENSELUG00000006743	ddx1	100	81.242	ENSSPUG00000018835	DDX1	100	81.242	Sphenodon_punctatus
ENSELUG00000006743	ddx1	100	82.591	ENSSPAG00000023554	ddx1	100	82.591	Stegastes_partitus
ENSELUG00000006743	ddx1	100	82.186	ENSSSCG00000008619	DDX1	100	82.186	Sus_scrofa
ENSELUG00000006743	ddx1	100	81.497	ENSTGUG00000013096	DDX1	100	81.107	Taeniopygia_guttata
ENSELUG00000006743	ddx1	100	86.259	ENSTRUG00000015765	ddx1	99	86.333	Takifugu_rubripes
ENSELUG00000006743	ddx1	100	86.370	ENSTNIG00000016309	ddx1	100	86.370	Tetraodon_nigroviridis
ENSELUG00000006743	ddx1	100	78.776	ENSTBEG00000008454	DDX1	100	78.776	Tupaia_belangeri
ENSELUG00000006743	ddx1	100	82.456	ENSTTRG00000005081	DDX1	100	82.456	Tursiops_truncatus
ENSELUG00000006743	ddx1	61	79.065	ENSUAMG00000017375	DDX1	85	80.410	Ursus_americanus
ENSELUG00000006743	ddx1	100	82.177	ENSUMAG00000023450	DDX1	100	82.177	Ursus_maritimus
ENSELUG00000006743	ddx1	85	86.058	ENSVPAG00000007764	DDX1	85	86.058	Vicugna_pacos
ENSELUG00000006743	ddx1	100	82.313	ENSVVUG00000013085	DDX1	96	82.337	Vulpes_vulpes
ENSELUG00000006743	ddx1	100	83.266	ENSXETG00000017825	ddx1	100	83.266	Xenopus_tropicalis
ENSELUG00000006743	ddx1	100	84.492	ENSXCOG00000007082	ddx1	100	84.492	Xiphophorus_couchianus
ENSELUG00000006743	ddx1	100	86.775	ENSXMAG00000004555	ddx1	100	86.775	Xiphophorus_maculatus