EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000006786 (Gene tree)
Gene ID: 105013600
Gene Symbol: HCC1
Alias: -
Full Name: SAP domain-containing ribonucleoprotein
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 3854 bases
Position: chrLG12:8633273-8637126
Accession: 105013600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000005780	SAP	PF02037.27	3.2e-11	1	1
ENSELUP00000005767	SAP	PF02037.27	3.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000010104	-	1913	-	ENSELUP00000005767	213 (aa)	-	C1BX76
ENSELUT00000010084	-	2025	-	ENSELUP00000005780	206 (aa)	-	-

Gene Model

Click here to download ENSELUG00000006786's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000006786's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000006786	HCC1	99	66.820	ENSELUG00000020983	sarnp	100	66.820

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000006786	HCC1	97	57.407	ENSG00000205323	SARNP	81	80.952	Homo_sapiens
ENSELUG00000006786	HCC1	98	57.212	ENSAPOG00000005247	sarnp	83	57.212	Acanthochromis_polyacanthus
ENSELUG00000006786	HCC1	98	57.727	ENSAMEG00000011769	SARNP	98	57.727	Ailuropoda_melanoleuca
ENSELUG00000006786	HCC1	99	59.908	ENSAPEG00000016710	sarnp	100	59.908	Amphiprion_percula
ENSELUG00000006786	HCC1	99	62.617	ENSATEG00000024594	sarnp	100	62.617	Anabas_testudineus
ENSELUG00000006786	HCC1	98	55.963	ENSACAG00000015446	SARNP	97	55.605	Anolis_carolinensis
ENSELUG00000006786	HCC1	97	56.944	ENSANAG00000027405	-	98	56.944	Aotus_nancymaae
ENSELUG00000006786	HCC1	97	50.000	ENSANAG00000025021	-	97	50.000	Aotus_nancymaae
ENSELUG00000006786	HCC1	99	61.682	ENSACLG00000016479	sarnp	100	61.682	Astatotilapia_calliptera
ENSELUG00000006786	HCC1	99	65.596	ENSAMXG00000004834	sarnp	100	65.596	Astyanax_mexicanus
ENSELUG00000006786	HCC1	82	52.326	ENSBTAG00000032446	-	83	52.542	Bos_taurus
ENSELUG00000006786	HCC1	97	57.547	ENSBTAG00000020662	SARNP	98	57.870	Bos_taurus
ENSELUG00000006786	HCC1	97	57.870	ENSCJAG00000007853	-	98	57.870	Callithrix_jacchus
ENSELUG00000006786	HCC1	94	55.502	ENSCAFG00000023714	SARNP	94	56.459	Canis_familiaris
ENSELUG00000006786	HCC1	93	54.106	ENSCAFG00020026107	SARNP	91	54.106	Canis_lupus_dingo
ENSELUG00000006786	HCC1	98	52.885	ENSCHIG00000017443	-	97	53.140	Capra_hircus
ENSELUG00000006786	HCC1	98	53.271	ENSCHIG00000013335	-	98	53.670	Capra_hircus
ENSELUG00000006786	HCC1	98	56.306	ENSTSYG00000009225	SARNP	98	56.306	Carlito_syrichta
ENSELUG00000006786	HCC1	97	57.870	ENSCPOG00000011755	-	98	57.870	Cavia_porcellus
ENSELUG00000006786	HCC1	97	57.407	ENSCCAG00000019247	-	98	57.407	Cebus_capucinus
ENSELUG00000006786	HCC1	97	41.395	ENSCCAG00000030892	-	95	45.588	Cebus_capucinus
ENSELUG00000006786	HCC1	98	51.376	ENSCCAG00000004296	-	94	51.402	Cebus_capucinus
ENSELUG00000006786	HCC1	97	57.407	ENSCATG00000045088	SARNP	98	57.407	Cercocebus_atys
ENSELUG00000006786	HCC1	98	49.099	ENSCATG00000042076	-	84	70.213	Cercocebus_atys
ENSELUG00000006786	HCC1	98	58.065	ENSCLAG00000007774	-	98	58.065	Chinchilla_lanigera
ENSELUG00000006786	HCC1	97	57.407	ENSCSAG00000005303	SARNP	95	57.407	Chlorocebus_sabaeus
ENSELUG00000006786	HCC1	93	56.158	ENSCHOG00000005081	SARNP	99	56.522	Choloepus_hoffmanni
ENSELUG00000006786	HCC1	99	57.746	ENSCPBG00000012618	SARNP	99	56.696	Chrysemys_picta_bellii
ENSELUG00000006786	HCC1	97	36.404	ENSCING00000015811	-	96	37.838	Ciona_intestinalis
ENSELUG00000006786	HCC1	97	56.944	ENSCANG00000027918	-	98	56.944	Colobus_angolensis_palliatus
ENSELUG00000006786	HCC1	98	47.418	ENSCGRG00001013880	-	98	47.418	Cricetulus_griseus_chok1gshd
ENSELUG00000006786	HCC1	99	45.540	ENSCGRG00001022403	-	81	46.047	Cricetulus_griseus_chok1gshd
ENSELUG00000006786	HCC1	97	55.656	ENSCGRG00001018129	-	98	55.656	Cricetulus_griseus_chok1gshd
ENSELUG00000006786	HCC1	97	55.656	ENSCGRG00000015182	-	98	55.656	Cricetulus_griseus_crigri
ENSELUG00000006786	HCC1	99	50.472	ENSCGRG00000000109	-	77	52.358	Cricetulus_griseus_crigri
ENSELUG00000006786	HCC1	98	47.418	ENSCGRG00000004298	-	98	47.418	Cricetulus_griseus_crigri
ENSELUG00000006786	HCC1	99	61.187	ENSCVAG00000010924	sarnp	100	62.100	Cyprinodon_variegatus
ENSELUG00000006786	HCC1	99	60.909	ENSDARG00000059357	sarnp	100	62.963	Danio_rerio
ENSELUG00000006786	HCC1	98	58.065	ENSDNOG00000014518	SARNP	98	58.065	Dasypus_novemcinctus
ENSELUG00000006786	HCC1	98	58.525	ENSDORG00000001065	-	98	58.525	Dipodomys_ordii
ENSELUG00000006786	HCC1	98	48.325	ENSEBUG00000016080	sarnp	97	48.325	Eptatretus_burgeri
ENSELUG00000006786	HCC1	98	58.065	ENSECAG00000000708	SARNP	98	58.065	Equus_caballus
ENSELUG00000006786	HCC1	98	54.955	ENSFCAG00000037076	SARNP	98	54.955	Felis_catus
ENSELUG00000006786	HCC1	89	55.978	ENSFALG00000000679	SARNP	71	56.684	Ficedula_albicollis
ENSELUG00000006786	HCC1	98	58.065	ENSFDAG00000007766	SARNP	98	58.065	Fukomys_damarensis
ENSELUG00000006786	HCC1	99	59.346	ENSFHEG00000012192	sarnp	100	59.813	Fundulus_heteroclitus
ENSELUG00000006786	HCC1	99	57.477	ENSGMOG00000011467	sarnp	100	57.477	Gadus_morhua
ENSELUG00000006786	HCC1	99	58.685	ENSGALG00000030342	SARNP	99	59.259	Gallus_gallus
ENSELUG00000006786	HCC1	99	59.813	ENSGAFG00000019183	sarnp	100	60.748	Gambusia_affinis
ENSELUG00000006786	HCC1	99	60.280	ENSGACG00000011615	sarnp	100	61.215	Gasterosteus_aculeatus
ENSELUG00000006786	HCC1	98	53.704	ENSGGOG00000041309	-	97	53.810	Gorilla_gorilla
ENSELUG00000006786	HCC1	97	57.407	ENSGGOG00000013217	SARNP	98	57.407	Gorilla_gorilla
ENSELUG00000006786	HCC1	99	62.150	ENSHBUG00000008761	sarnp	100	62.150	Haplochromis_burtoni
ENSELUG00000006786	HCC1	98	55.405	ENSHGLG00000016869	SARNP	98	55.405	Heterocephalus_glaber_female
ENSELUG00000006786	HCC1	98	55.405	ENSHGLG00100014657	SARNP	98	55.405	Heterocephalus_glaber_male
ENSELUG00000006786	HCC1	99	57.674	ENSHCOG00000015510	sarnp	100	57.477	Hippocampus_comes
ENSELUG00000006786	HCC1	99	64.953	ENSIPUG00000012503	Sarnp	100	65.581	Ictalurus_punctatus
ENSELUG00000006786	HCC1	98	58.065	ENSSTOG00000000283	SARNP	98	58.065	Ictidomys_tridecemlineatus
ENSELUG00000006786	HCC1	98	57.209	ENSJJAG00000001070	-	98	57.209	Jaculus_jaculus
ENSELUG00000006786	HCC1	95	51.659	ENSJJAG00000011057	-	93	51.659	Jaculus_jaculus
ENSELUG00000006786	HCC1	99	62.150	ENSKMAG00000013400	sarnp	100	62.150	Kryptolebias_marmoratus
ENSELUG00000006786	HCC1	99	60.280	ENSLBEG00000025038	sarnp	100	60.274	Labrus_bergylta
ENSELUG00000006786	HCC1	88	39.153	ENSLACG00000014810	-	96	39.153	Latimeria_chalumnae
ENSELUG00000006786	HCC1	95	57.635	ENSLACG00000018719	SARNP	89	57.843	Latimeria_chalumnae
ENSELUG00000006786	HCC1	99	62.037	ENSLOCG00000003621	sarnp	99	63.594	Lepisosteus_oculatus
ENSELUG00000006786	HCC1	98	54.955	ENSLAFG00000015053	SARNP	98	54.955	Loxodonta_africana
ENSELUG00000006786	HCC1	98	50.000	ENSMFAG00000032419	-	95	50.226	Macaca_fascicularis
ENSELUG00000006786	HCC1	97	57.407	ENSMFAG00000045270	SARNP	98	57.407	Macaca_fascicularis
ENSELUG00000006786	HCC1	97	57.407	ENSMMUG00000006289	-	98	57.407	Macaca_mulatta
ENSELUG00000006786	HCC1	97	50.679	ENSMMUG00000037731	-	98	50.679	Macaca_mulatta
ENSELUG00000006786	HCC1	97	46.154	ENSMNEG00000030688	-	95	46.635	Macaca_nemestrina
ENSELUG00000006786	HCC1	99	49.554	ENSMNEG00000041520	-	96	49.770	Macaca_nemestrina
ENSELUG00000006786	HCC1	97	57.407	ENSMNEG00000044633	-	98	57.407	Macaca_nemestrina
ENSELUG00000006786	HCC1	98	48.649	ENSMLEG00000037790	-	96	48.165	Mandrillus_leucophaeus
ENSELUG00000006786	HCC1	62	59.701	ENSMLEG00000038545	-	78	60.150	Mandrillus_leucophaeus
ENSELUG00000006786	HCC1	99	60.369	ENSMAMG00000005942	sarnp	100	60.369	Mastacembelus_armatus
ENSELUG00000006786	HCC1	99	62.150	ENSMZEG00005023533	sarnp	100	62.150	Maylandia_zebra
ENSELUG00000006786	HCC1	99	58.685	ENSMGAG00000001807	SARNP	99	59.259	Meleagris_gallopavo
ENSELUG00000006786	HCC1	97	56.109	ENSMAUG00000005256	-	98	56.109	Mesocricetus_auratus
ENSELUG00000006786	HCC1	97	57.870	ENSMICG00000010902	-	98	57.870	Microcebus_murinus
ENSELUG00000006786	HCC1	98	58.065	ENSMOCG00000006502	-	98	58.065	Microtus_ochrogaster
ENSELUG00000006786	HCC1	99	56.604	ENSMMOG00000013258	sarnp	100	56.604	Mola_mola
ENSELUG00000006786	HCC1	98	60.000	ENSMALG00000009106	sarnp	87	60.000	Monopterus_albus
ENSELUG00000006786	HCC1	98	55.405	MGP_CAROLIEiJ_G0015958	-	98	55.405	Mus_caroli
ENSELUG00000006786	HCC1	98	55.405	ENSMUSG00000078427	Sarnp	98	55.405	Mus_musculus
ENSELUG00000006786	HCC1	99	52.889	MGP_PahariEiJ_G0031126	-	94	55.446	Mus_pahari
ENSELUG00000006786	HCC1	98	55.405	MGP_SPRETEiJ_G0016783	-	98	55.405	Mus_spretus
ENSELUG00000006786	HCC1	98	57.604	ENSMPUG00000000885	SARNP	98	57.604	Mustela_putorius_furo
ENSELUG00000006786	HCC1	83	51.977	ENSMLUG00000003565	SARNP	99	51.977	Myotis_lucifugus
ENSELUG00000006786	HCC1	98	57.604	ENSNGAG00000010245	-	98	57.604	Nannospalax_galili
ENSELUG00000006786	HCC1	89	54.450	ENSNLEG00000017599	-	98	54.450	Nomascus_leucogenys
ENSELUG00000006786	HCC1	98	56.872	ENSMEUG00000014879	SARNP	98	56.872	Notamacropus_eugenii
ENSELUG00000006786	HCC1	98	45.374	ENSOPRG00000007733	SARNP	98	45.374	Ochotona_princeps
ENSELUG00000006786	HCC1	97	57.870	ENSODEG00000004608	-	98	57.870	Octodon_degus
ENSELUG00000006786	HCC1	92	44.615	ENSODEG00000012047	-	97	48.113	Octodon_degus
ENSELUG00000006786	HCC1	99	61.215	ENSONIG00000016523	sarnp	100	61.215	Oreochromis_niloticus
ENSELUG00000006786	HCC1	94	55.825	ENSOANG00000002882	SARNP	99	56.190	Ornithorhynchus_anatinus
ENSELUG00000006786	HCC1	97	55.556	ENSOCUG00000010117	SARNP	99	55.556	Oryctolagus_cuniculus
ENSELUG00000006786	HCC1	99	60.280	ENSORLG00000029565	sarnp	89	60.280	Oryzias_latipes
ENSELUG00000006786	HCC1	99	60.280	ENSORLG00015021649	sarnp	89	60.280	Oryzias_latipes_hsok
ENSELUG00000006786	HCC1	99	59.813	ENSOMEG00000014699	sarnp	100	59.813	Oryzias_melastigma
ENSELUG00000006786	HCC1	78	54.762	ENSOGAG00000001693	SARNP	94	54.762	Otolemur_garnettii
ENSELUG00000006786	HCC1	97	57.547	ENSOARG00000011218	SARNP	98	57.870	Ovis_aries
ENSELUG00000006786	HCC1	97	57.407	ENSPPAG00000039513	SARNP	98	57.407	Pan_paniscus
ENSELUG00000006786	HCC1	98	51.389	ENSPPAG00000042587	-	97	51.389	Pan_paniscus
ENSELUG00000006786	HCC1	98	54.955	ENSPPRG00000020704	SARNP	98	54.955	Panthera_pardus
ENSELUG00000006786	HCC1	98	51.389	ENSPTRG00000046696	-	97	51.389	Pan_troglodytes
ENSELUG00000006786	HCC1	97	57.407	ENSPTRG00000029747	SARNP	98	57.407	Pan_troglodytes
ENSELUG00000006786	HCC1	98	49.099	ENSPANG00000006001	-	95	49.321	Papio_anubis
ENSELUG00000006786	HCC1	98	57.143	ENSPANG00000013149	-	98	54.751	Papio_anubis
ENSELUG00000006786	HCC1	99	64.319	ENSPKIG00000002212	sarnp	100	66.197	Paramormyrops_kingsleyae
ENSELUG00000006786	HCC1	99	54.206	ENSPSIG00000002998	SARNP	98	53.604	Pelodiscus_sinensis
ENSELUG00000006786	HCC1	98	56.306	ENSPEMG00000000923	-	98	56.306	Peromyscus_maniculatus_bairdii
ENSELUG00000006786	HCC1	97	45.581	ENSPMAG00000009808	sarnp	94	48.357	Petromyzon_marinus
ENSELUG00000006786	HCC1	93	55.399	ENSPCIG00000024663	SARNP	98	55.399	Phascolarctos_cinereus
ENSELUG00000006786	HCC1	99	58.525	ENSPFOG00000013517	sarnp	100	61.395	Poecilia_formosa
ENSELUG00000006786	HCC1	99	58.525	ENSPLAG00000017096	sarnp	100	61.682	Poecilia_latipinna
ENSELUG00000006786	HCC1	99	58.986	ENSPMEG00000014306	sarnp	100	62.150	Poecilia_mexicana
ENSELUG00000006786	HCC1	92	50.505	ENSPREG00000019598	sarnp	79	50.505	Poecilia_reticulata
ENSELUG00000006786	HCC1	97	57.407	ENSPPYG00000004630	SARNP	98	57.407	Pongo_abelii
ENSELUG00000006786	HCC1	99	61.215	ENSPNAG00000000975	sarnp	100	62.791	Pygocentrus_nattereri
ENSELUG00000006786	HCC1	97	55.204	ENSRNOG00000030520	Sarnp	98	55.204	Rattus_norvegicus
ENSELUG00000006786	HCC1	97	50.691	ENSRBIG00000026928	-	95	50.691	Rhinopithecus_bieti
ENSELUG00000006786	HCC1	99	54.206	ENSRBIG00000019503	-	98	54.460	Rhinopithecus_bieti
ENSELUG00000006786	HCC1	97	44.019	ENSRBIG00000037388	-	94	44.712	Rhinopithecus_bieti
ENSELUG00000006786	HCC1	97	56.944	ENSRBIG00000039295	-	98	56.944	Rhinopithecus_bieti
ENSELUG00000006786	HCC1	97	56.944	ENSRROG00000035177	-	98	56.944	Rhinopithecus_roxellana
ENSELUG00000006786	HCC1	97	50.691	ENSRROG00000044575	-	95	50.691	Rhinopithecus_roxellana
ENSELUG00000006786	HCC1	97	44.811	ENSSBOG00000022787	-	97	46.392	Saimiri_boliviensis_boliviensis
ENSELUG00000006786	HCC1	97	57.407	ENSSBOG00000035337	-	98	57.407	Saimiri_boliviensis_boliviensis
ENSELUG00000006786	HCC1	97	55.556	ENSSBOG00000028635	-	96	55.300	Saimiri_boliviensis_boliviensis
ENSELUG00000006786	HCC1	98	56.757	ENSSHAG00000008865	SARNP	98	56.757	Sarcophilus_harrisii
ENSELUG00000006786	HCC1	99	65.596	ENSSFOG00015020709	sarnp	100	65.596	Scleropages_formosus
ENSELUG00000006786	HCC1	98	59.434	ENSSMAG00000018587	sarnp	99	59.434	Scophthalmus_maximus
ENSELUG00000006786	HCC1	99	62.617	ENSSDUG00000005484	sarnp	100	62.617	Seriola_dumerili
ENSELUG00000006786	HCC1	99	62.617	ENSSLDG00000003775	sarnp	100	62.617	Seriola_lalandi_dorsalis
ENSELUG00000006786	HCC1	61	70.000	ENSSARG00000004858	SARNP	63	70.000	Sorex_araneus
ENSELUG00000006786	HCC1	95	48.095	ENSSPUG00000015135	SARNP	97	48.095	Sphenodon_punctatus
ENSELUG00000006786	HCC1	97	57.870	ENSSSCG00000000364	SARNP	98	57.870	Sus_scrofa
ENSELUG00000006786	HCC1	93	54.688	ENSTGUG00000016126	SARNP	97	55.385	Taeniopygia_guttata
ENSELUG00000006786	HCC1	99	59.624	ENSTRUG00000009497	-	100	60.563	Takifugu_rubripes
ENSELUG00000006786	HCC1	98	53.431	ENSTNIG00000012432	sarnp	100	54.545	Tetraodon_nigroviridis
ENSELUG00000006786	HCC1	97	52.778	ENSTTRG00000009735	SARNP	97	52.778	Tursiops_truncatus
ENSELUG00000006786	HCC1	78	54.706	ENSUAMG00000015093	-	82	54.706	Ursus_americanus
ENSELUG00000006786	HCC1	92	57.868	ENSVPAG00000009515	SARNP	94	57.868	Vicugna_pacos
ENSELUG00000006786	HCC1	98	56.682	ENSVVUG00000022779	SARNP	98	57.604	Vulpes_vulpes
ENSELUG00000006786	HCC1	99	58.411	ENSXETG00000024657	sarnp	99	58.411	Xenopus_tropicalis
ENSELUG00000006786	HCC1	99	60.748	ENSXMAG00000009356	sarnp	100	61.682	Xiphophorus_maculatus