EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000006905 (Gene tree)
Gene ID
105012781
Gene Symbol
-
Alias
-
Full Name
RNA-binding motif%2C single-stranded-interacting protein 3
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Minus strand
Length
286665 bases
Position
chrLG10:1977298-2263962
Accession
105012781
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000005886RRM_1PF00076.228.8e-3312
ENSELUP00000005886RRM_1PF00076.228.8e-3322
ENSELUP00000005934RRM_1PF00076.223.2e-3212
ENSELUP00000005934RRM_1PF00076.223.2e-3222
ENSELUP00000029866RRM_1PF00076.223.4e-3212
ENSELUP00000029866RRM_1PF00076.223.4e-3222
ENSELUP00000029831RRM_1PF00076.227.3e-3212
ENSELUP00000029831RRM_1PF00076.227.3e-3222
ENSELUP00000029839RRM_1PF00076.221.2e-3112
ENSELUP00000029839RRM_1PF00076.221.2e-3122
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000009879-2104-ENSELUP00000005886249 (aa)--
ENSELUT00000009854-1548XM_020050282ENSELUP00000029831515 (aa)XP_019905841UPI00097338AC
ENSELUT00000009770-1167-ENSELUP00000029866388 (aa)--
ENSELUT00000009798-1427XM_013135681ENSELUP00000005934382 (aa)XP_012991135-
ENSELUT00000009831-1927-ENSELUP00000029839616 (aa)--
Gene Model
Click here to download ENSELUG00000006905's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000006905's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000006905-8884.091ENSELUG00000019834rbms2a9172.513
ENSELUG00000006905-9661.290ENSELUG00000019328RBMS19160.714
ENSELUG00000006905-6539.474ENSELUG00000005848-5539.474
ENSELUG00000006905-7638.119ENSELUG00000010026ELAVL26537.879
ENSELUG00000006905-8338.961ENSELUG00000023173celf15439.474
ENSELUG00000006905-9176.754ENSELUG00000007892rbms2b9467.532
ENSELUG00000006905-8235.052ENSELUG00000023043elavl36935.638
ENSELUG00000006905-6733.750ENSELUG00000006121celf3a5633.750
ENSELUG00000006905-6834.682ENSELUG00000008024elavl1a8634.682
ENSELUG00000006905-7635.484ENSELUG00000008025elavl46536.082
ENSELUG00000006905-6335.789ENSELUG00000001811pabpc1l6735.789
ENSELUG00000006905-8873.094ENSELUG00000018923rbms1a10060.358
ENSELUG00000006905-6532.500ENSELUG00000013477celf3b5332.500
ENSELUG00000006905-7233.333ENSELUG00000003289-5632.653
ENSELUG00000006905-8534.667ENSELUG00000007383celf5b8035.000
ENSELUG00000006905-9886.056ENSELUG00000002862rbms39979.434
ENSELUG00000006905-6735.000ENSELUG00000018986celf5a5735.526
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000006905-9890.726ENSG00000144642RBMS310090.530Homo_sapiens
ENSELUG00000006905-10096.335ENSAPOG00000003432-9296.335Acanthochromis_polyacanthus
ENSELUG00000006905-9881.746ENSAPOG00000007266rbms39580.203Acanthochromis_polyacanthus
ENSELUG00000006905-7583.498ENSAMEG00000005947RBMS39983.498Ailuropoda_melanoleuca
ENSELUG00000006905-9574.317ENSACIG00000021113RBMS39873.670Amphilophus_citrinellus
ENSELUG00000006905-8197.525ENSACIG00000006987-8797.179Amphilophus_citrinellus
ENSELUG00000006905-9886.166ENSAOCG00000021274rbms39083.938Amphiprion_ocellaris
ENSELUG00000006905-10096.335ENSAOCG00000024104-9288.778Amphiprion_ocellaris
ENSELUG00000006905-9897.942ENSAPEG00000009481-9187.696Amphiprion_percula
ENSELUG00000006905-8983.239ENSAPEG00000016299rbms39383.239Amphiprion_percula
ENSELUG00000006905-9886.853ENSATEG00000024295rbms39084.896Anabas_testudineus
ENSELUG00000006905-10096.335ENSATEG00000008433-9296.335Anabas_testudineus
ENSELUG00000006905-9891.129ENSAPLG00000012270RBMS39285.427Anas_platyrhynchos
ENSELUG00000006905-9890.726ENSACAG00000028664RBMS39090.501Anolis_carolinensis
ENSELUG00000006905-9890.726ENSANAG00000021899RBMS39086.768Aotus_nancymaae
ENSELUG00000006905-9886.400ENSACLG00000018506rbms39981.491Astatotilapia_calliptera
ENSELUG00000006905-9897.942ENSACLG00000008976-9281.762Astatotilapia_calliptera
ENSELUG00000006905-9894.239ENSAMXG00000020388rbms39092.781Astyanax_mexicanus
ENSELUG00000006905-9887.654ENSAMXG00000043770-10087.209Astyanax_mexicanus
ENSELUG00000006905-9890.361ENSBTAG00000044062RBMS39985.323Bos_taurus
ENSELUG00000006905-9890.726ENSCJAG00000004312RBMS39086.768Callithrix_jacchus
ENSELUG00000006905-9890.361ENSCAFG00000005464RBMS39086.111Canis_familiaris
ENSELUG00000006905-9890.361ENSCAFG00020024980RBMS39284.826Canis_lupus_dingo
ENSELUG00000006905-9890.361ENSCHIG00000009144RBMS39189.091Capra_hircus
ENSELUG00000006905-8385.152ENSTSYG00000002615RBMS39985.152Carlito_syrichta
ENSELUG00000006905-9683.288ENSCAPG00000017783RBMS39782.895Cavia_aperea
ENSELUG00000006905-9892.623ENSCPOG00000006457RBMS39188.976Cavia_porcellus
ENSELUG00000006905-9890.726ENSCCAG00000008671RBMS39086.768Cebus_capucinus
ENSELUG00000006905-9890.361ENSCATG00000013222RBMS39285.075Cercocebus_atys
ENSELUG00000006905-9890.361ENSCLAG00000005866RBMS39089.211Chinchilla_lanigera
ENSELUG00000006905-7087.037ENSCSAG00000009655RBMS39987.037Chlorocebus_sabaeus
ENSELUG00000006905-8884.986ENSCHOG00000000758RBMS37788.000Choloepus_hoffmanni
ENSELUG00000006905-9891.129ENSCPBG00000022678RBMS39987.335Chrysemys_picta_bellii
ENSELUG00000006905-9890.361ENSCANG00000032137RBMS39086.514Colobus_angolensis_palliatus
ENSELUG00000006905-9891.803ENSCGRG00001007243Rbms39982.426Cricetulus_griseus_chok1gshd
ENSELUG00000006905-9891.803ENSCGRG00000004599Rbms39982.426Cricetulus_griseus_crigri
ENSELUG00000006905-9897.959ENSCSEG00000014677-9597.959Cynoglossus_semilaevis
ENSELUG00000006905-9886.508ENSCSEG00000010011RBMS39581.330Cynoglossus_semilaevis
ENSELUG00000006905-9888.259ENSCVAG00000022354rbms39085.526Cyprinodon_variegatus
ENSELUG00000006905-10096.084ENSCVAG00000022814-10096.084Cyprinodon_variegatus
ENSELUG00000006905-9895.062ENSDARG00000044574rbms310097.222Danio_rerio
ENSELUG00000006905-9890.361ENSDNOG00000016645RBMS38789.211Dasypus_novemcinctus
ENSELUG00000006905-9890.361ENSDORG00000007220Rbms39088.947Dipodomys_ordii
ENSELUG00000006905-7693.976ENSETEG00000009485-8070.286Echinops_telfairi
ENSELUG00000006905-6274.675ENSEBUG00000005830rbms38954.945Eptatretus_burgeri
ENSELUG00000006905-9890.361ENSEASG00005006152RBMS39089.474Equus_asinus_asinus
ENSELUG00000006905-9890.361ENSECAG00000017871RBMS39089.474Equus_caballus
ENSELUG00000006905-9879.435ENSEEUG00000014337RBMS310079.293Erinaceus_europaeus
ENSELUG00000006905-9890.726ENSFCAG00000002130RBMS39089.211Felis_catus
ENSELUG00000006905-9891.532ENSFALG00000009165RBMS39090.765Ficedula_albicollis
ENSELUG00000006905-9890.361ENSFDAG00000008278RBMS39088.947Fukomys_damarensis
ENSELUG00000006905-9974.026ENSFHEG00000004787RBMS39974.026Fundulus_heteroclitus
ENSELUG00000006905-5197.656ENSFHEG00000016746-9397.656Fundulus_heteroclitus
ENSELUG00000006905-9889.169ENSGMOG00000002600-9789.356Gadus_morhua
ENSELUG00000006905-9891.532ENSGALG00000011439RBMS39090.765Gallus_gallus
ENSELUG00000006905-9888.306ENSGAFG00000000168rbms39982.429Gambusia_affinis
ENSELUG00000006905-9898.354ENSGAFG00000003329-9296.606Gambusia_affinis
ENSELUG00000006905-7187.823ENSGAGG00000004039RBMS39987.823Gopherus_agassizii
ENSELUG00000006905-9890.726ENSGGOG00000007228RBMS39086.768Gorilla_gorilla
ENSELUG00000006905-9897.942ENSHBUG00000019785-8696.997Haplochromis_burtoni
ENSELUG00000006905-9886.400ENSHBUG00000021196rbms39485.502Haplochromis_burtoni
ENSELUG00000006905-9890.361ENSHGLG00000002170RBMS39089.474Heterocephalus_glaber_female
ENSELUG00000006905-9890.361ENSHGLG00100014278RBMS39089.474Heterocephalus_glaber_male
ENSELUG00000006905-9895.885ENSHCOG00000007894-9695.039Hippocampus_comes
ENSELUG00000006905-9893.827ENSIPUG00000017680rbms39092.513Ictalurus_punctatus
ENSELUG00000006905-9890.763ENSSTOG00000006324RBMS39089.737Ictidomys_tridecemlineatus
ENSELUG00000006905-9887.550ENSJJAG00000014708Rbms39187.306Jaculus_jaculus
ENSELUG00000006905-9885.433ENSKMAG00000020500rbms39083.204Kryptolebias_marmoratus
ENSELUG00000006905-9897.531ENSKMAG00000012586-9097.594Kryptolebias_marmoratus
ENSELUG00000006905-6675.379ENSLBEG00000006677rbms39974.349Labrus_bergylta
ENSELUG00000006905-9897.942ENSLBEG00000027388-9196.848Labrus_bergylta
ENSELUG00000006905-9892.683ENSLACG00000010581RBMS39092.593Latimeria_chalumnae
ENSELUG00000006905-7691.349ENSLOCG00000002328rbms39991.349Lepisosteus_oculatus
ENSELUG00000006905-9890.361ENSLAFG00000000354RBMS39284.577Loxodonta_africana
ENSELUG00000006905-9890.361ENSMFAG00000033300RBMS39089.474Macaca_fascicularis
ENSELUG00000006905-9890.361ENSMMUG00000004404RBMS39089.474Macaca_mulatta
ENSELUG00000006905-9890.361ENSMNEG00000035839RBMS39984.577Macaca_nemestrina
ENSELUG00000006905-9890.361ENSMLEG00000029464RBMS39285.075Mandrillus_leucophaeus
ENSELUG00000006905-9897.531ENSMAMG00000002176-8896.697Mastacembelus_armatus
ENSELUG00000006905-9886.508ENSMAMG00000024043rbms39084.935Mastacembelus_armatus
ENSELUG00000006905-9886.400ENSMZEG00005006308rbms39084.073Maylandia_zebra
ENSELUG00000006905-9897.942ENSMZEG00005026469-8892.857Maylandia_zebra
ENSELUG00000006905-9891.803ENSMAUG00000016436Rbms39982.426Mesocricetus_auratus
ENSELUG00000006905-9890.361ENSMICG00000049249RBMS39086.514Microcebus_murinus
ENSELUG00000006905-9889.344ENSMOCG00000006997Rbms39981.683Microtus_ochrogaster
ENSELUG00000006905-8983.714ENSMMOG00000008471RBMS39584.286Mola_mola
ENSELUG00000006905-9897.942ENSMMOG00000015071-9294.241Mola_mola
ENSELUG00000006905-9885.259ENSMODG00000015125RBMS38784.439Monodelphis_domestica
ENSELUG00000006905-10095.812ENSMALG00000009155-9296.176Monopterus_albus
ENSELUG00000006905-9886.508ENSMALG00000019536RBMS39282.353Monopterus_albus
ENSELUG00000006905-9890.164MGP_CAROLIEiJ_G0032783Rbms310090.821Mus_caroli
ENSELUG00000006905-9891.393ENSMUSG00000039607Rbms310092.271Mus_musculus
ENSELUG00000006905-9891.393MGP_PahariEiJ_G0015650Rbms310092.271Mus_pahari
ENSELUG00000006905-9891.393MGP_SPRETEiJ_G0033930Rbms310092.271Mus_spretus
ENSELUG00000006905-9890.361ENSMPUG00000011956RBMS39285.075Mustela_putorius_furo
ENSELUG00000006905-9890.361ENSMLUG00000000659RBMS39089.737Myotis_lucifugus
ENSELUG00000006905-9892.213ENSNGAG00000014039Rbms39188.451Nannospalax_galili
ENSELUG00000006905-9897.942ENSNBRG00000018065-9295.288Neolamprologus_brichardi
ENSELUG00000006905-9890.726ENSNLEG00000004129RBMS39086.768Nomascus_leucogenys
ENSELUG00000006905-9879.116ENSMEUG00000004772RBMS39277.916Notamacropus_eugenii
ENSELUG00000006905-9890.361ENSOPRG00000006808RBMS37785.751Ochotona_princeps
ENSELUG00000006905-9890.763ENSODEG00000003651RBMS39089.737Octodon_degus
ENSELUG00000006905-9887.097ENSONIG00000007172rbms39381.912Oreochromis_niloticus
ENSELUG00000006905-9891.165ENSOANG00000010529RBMS39086.869Ornithorhynchus_anatinus
ENSELUG00000006905-9889.558ENSOCUG00000004840RBMS39085.354Oryctolagus_cuniculus
ENSELUG00000006905-9887.097ENSORLG00000005370RBMS39083.202Oryzias_latipes
ENSELUG00000006905-9897.942ENSORLG00000002306-9295.288Oryzias_latipes
ENSELUG00000006905-9887.097ENSORLG00020022674RBMS38687.678Oryzias_latipes_hni
ENSELUG00000006905-9897.942ENSORLG00020008496-9295.550Oryzias_latipes_hni
ENSELUG00000006905-9897.942ENSORLG00015015719-9295.550Oryzias_latipes_hsok
ENSELUG00000006905-9887.500ENSORLG00015005509rbms38687.678Oryzias_latipes_hsok
ENSELUG00000006905-10095.288ENSOMEG00000007677-10095.288Oryzias_melastigma
ENSELUG00000006905-9888.306ENSOMEG00000014805RBMS39981.137Oryzias_melastigma
ENSELUG00000006905-9890.361ENSOARG00000014684RBMS39185.037Ovis_aries
ENSELUG00000006905-9890.726ENSPPAG00000036519RBMS39086.768Pan_paniscus
ENSELUG00000006905-9890.323ENSPPRG00000002761RBMS39086.005Panthera_pardus
ENSELUG00000006905-9890.323ENSPTIG00000011568RBMS39088.947Panthera_tigris_altaica
ENSELUG00000006905-9890.726ENSPTRG00000014709RBMS39089.737Pan_troglodytes
ENSELUG00000006905-9890.361ENSPANG00000010234RBMS39285.075Papio_anubis
ENSELUG00000006905-9893.033ENSPKIG00000007989-10092.636Paramormyrops_kingsleyae
ENSELUG00000006905-8494.231ENSPKIG00000016025-7394.686Paramormyrops_kingsleyae
ENSELUG00000006905-9890.726ENSPSIG00000005269RBMS39090.237Pelodiscus_sinensis
ENSELUG00000006905-10096.335ENSPMGG00000021683-10096.335Periophthalmus_magnuspinnatus
ENSELUG00000006905-8983.333ENSPMGG00000021544rbms39183.333Periophthalmus_magnuspinnatus
ENSELUG00000006905-9892.181ENSPEMG00000001117Rbms39183.421Peromyscus_maniculatus_bairdii
ENSELUG00000006905-9889.558ENSPCIG00000006106RBMS38989.720Phascolarctos_cinereus
ENSELUG00000006905-9888.306ENSPFOG00000017887rbms39085.039Poecilia_formosa
ENSELUG00000006905-5197.656ENSPLAG00000005161-7797.656Poecilia_latipinna
ENSELUG00000006905-8481.308ENSPLAG00000016866-8281.308Poecilia_latipinna
ENSELUG00000006905-5991.216ENSPMEG00000012831-7290.184Poecilia_mexicana
ENSELUG00000006905-9897.531ENSPMEG00000002993-9296.345Poecilia_mexicana
ENSELUG00000006905-9897.942ENSPREG00000018221-9795.238Poecilia_reticulata
ENSELUG00000006905-9885.425ENSPREG00000011880rbms39682.519Poecilia_reticulata
ENSELUG00000006905-9671.717ENSPPYG00000014050RBMS37371.970Pongo_abelii
ENSELUG00000006905-9875.403ENSPCAG00000006307RBMS39163.930Procavia_capensis
ENSELUG00000006905-9890.726ENSPCOG00000017136RBMS39285.075Propithecus_coquereli
ENSELUG00000006905-9085.359ENSPVAG00000014037RBMS38285.359Pteropus_vampyrus
ENSELUG00000006905-9897.942ENSPNYG00000012624-9295.550Pundamilia_nyererei
ENSELUG00000006905-9886.400ENSPNYG00000010546rbms39083.812Pundamilia_nyererei
ENSELUG00000006905-9894.650ENSPNAG00000001800rbms39093.048Pygocentrus_nattereri
ENSELUG00000006905-7391.803ENSPNAG00000026763-7791.379Pygocentrus_nattereri
ENSELUG00000006905-9891.803ENSRNOG00000025881Rbms39784.655Rattus_norvegicus
ENSELUG00000006905-9890.361ENSRBIG00000035863RBMS39086.260Rhinopithecus_bieti
ENSELUG00000006905-9686.280ENSRROG00000027512RBMS39784.962Rhinopithecus_roxellana
ENSELUG00000006905-9890.726ENSSBOG00000020232RBMS39086.768Saimiri_boliviensis_boliviensis
ENSELUG00000006905-9683.333ENSSHAG00000002411RBMS39981.654Sarcophilus_harrisii
ENSELUG00000006905-9897.119ENSSFOG00015008578rbms310093.717Scleropages_formosus
ENSELUG00000006905-10082.239ENSSMAG00000004997rbms39984.153Scophthalmus_maximus
ENSELUG00000006905-9897.531ENSSMAG00000020065-9695.065Scophthalmus_maximus
ENSELUG00000006905-10096.335ENSSDUG00000019287-9296.335Seriola_dumerili
ENSELUG00000006905-9886.111ENSSDUG00000013656RBMS39482.097Seriola_dumerili
ENSELUG00000006905-9885.490ENSSLDG00000020276RBMS39084.278Seriola_lalandi_dorsalis
ENSELUG00000006905-10096.335ENSSLDG00000013224-9296.335Seriola_lalandi_dorsalis
ENSELUG00000006905-7894.872ENSSARG00000000695RBMS39873.481Sorex_araneus
ENSELUG00000006905-7586.301ENSSPUG00000017197RBMS39785.185Sphenodon_punctatus
ENSELUG00000006905-10096.335ENSSPAG00000003983-9287.282Stegastes_partitus
ENSELUG00000006905-9886.166ENSSPAG00000020693rbms39883.146Stegastes_partitus
ENSELUG00000006905-9890.361ENSSSCG00000036381RBMS39888.342Sus_scrofa
ENSELUG00000006905-8384.985ENSTGUG00000003572RBMS39984.985Taeniopygia_guttata
ENSELUG00000006905-8995.308ENSTRUG00000007482-8991.413Takifugu_rubripes
ENSELUG00000006905-9884.921ENSTRUG00000021719RBMS39281.980Takifugu_rubripes
ENSELUG00000006905-7894.872ENSTBEG00000005362RBMS39886.188Tupaia_belangeri
ENSELUG00000006905-9889.960ENSTTRG00000006202RBMS39284.328Tursiops_truncatus
ENSELUG00000006905-9890.361ENSUMAG00000000263RBMS38890.571Ursus_maritimus
ENSELUG00000006905-9575.853ENSVPAG00000003842RBMS39775.124Vicugna_pacos
ENSELUG00000006905-9586.352ENSVVUG00000004660RBMS39991.304Vulpes_vulpes
ENSELUG00000006905-7681.433ENSXETG00000032055RBMS39881.433Xenopus_tropicalis
ENSELUG00000006905-10080.720ENSXCOG00000019600-10080.720Xiphophorus_couchianus
ENSELUG00000006905-9885.141ENSXMAG00000021783rbms39975.711Xiphophorus_maculatus
ENSELUG00000006905-9897.942ENSXMAG00000014382-9296.345Xiphophorus_maculatus

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