EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000007123 (Gene tree)
Gene ID: 105030510
Gene Symbol: rab12
Alias: zgc:111945
Full Name: RAB12%2C member RAS oncogene family
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 9881 bases
Position: chrLG03:2354839-2364719
Accession: 105030510
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000006210	MMR_HSR1	PF01926.23	8.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000009328	-	2026	XM_010904406	ENSELUP00000006210	240 (aa)	XP_010902708	UPI000575FE0D

Gene Model

Click here to download ENSELUG00000007123's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000007123's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000007123	rab12	69	50.303	ENSELUG00000011680	zgc:171927	78	50.303
ENSELUG00000007123	rab12	70	51.479	ENSELUG00000012166	RAB1A	79	51.479
ENSELUG00000007123	rab12	70	30.460	ENSELUG00000008115	-	79	30.460
ENSELUG00000007123	rab12	77	36.957	ENSELUG00000001257	rab6ba	83	36.957
ENSELUG00000007123	rab12	68	46.296	ENSELUG00000023972	rab35	92	43.011
ENSELUG00000007123	rab12	68	38.922	ENSELUG00000006539	RAB7A	80	38.922
ENSELUG00000007123	rab12	70	30.636	ENSELUG00000006480	rheb	90	30.636
ENSELUG00000007123	rab12	88	37.383	ENSELUG00000006604	rab25a	98	37.383
ENSELUG00000007123	rab12	86	45.146	ENSELUG00000015413	rab1ab	99	45.146
ENSELUG00000007123	rab12	69	42.424	ENSELUG00000019240	-	84	42.424
ENSELUG00000007123	rab12	68	46.951	ENSELUG00000003805	rab18a	79	46.951
ENSELUG00000007123	rab12	66	30.818	ENSELUG00000016028	rhebl1	85	30.818
ENSELUG00000007123	rab12	70	40.828	ENSELUG00000014785	rab4a	79	40.828
ENSELUG00000007123	rab12	75	46.409	ENSELUG00000022997	rab30	87	46.409
ENSELUG00000007123	rab12	69	44.311	ENSELUG00000013957	-	78	44.311
ENSELUG00000007123	rab12	70	44.643	ENSELUG00000023964	rab2a	88	41.270
ENSELUG00000007123	rab12	69	42.424	ENSELUG00000020948	-	92	47.500
ENSELUG00000007123	rab12	74	42.938	ENSELUG00000005989	RAB15	82	42.938
ENSELUG00000007123	rab12	77	37.433	ENSELUG00000013436	rab5ab	84	37.433
ENSELUG00000007123	rab12	86	38.208	ENSELUG00000013571	-	97	38.208
ENSELUG00000007123	rab12	71	44.767	ENSELUG00000020012	rab15	80	44.767
ENSELUG00000007123	rab12	69	43.030	ENSELUG00000000916	-	91	46.825
ENSELUG00000007123	rab12	66	40.000	ENSELUG00000023120	-	74	40.000
ENSELUG00000007123	rab12	75	37.430	ENSELUG00000006462	rab5aa	81	37.430
ENSELUG00000007123	rab12	68	47.561	ENSELUG00000016450	rab18b	79	47.561
ENSELUG00000007123	rab12	73	49.143	ENSELUG00000012428	-	84	49.704
ENSELUG00000007123	rab12	69	44.311	ENSELUG00000005304	rab39ba	78	44.311
ENSELUG00000007123	rab12	82	38.776	ENSELUG00000009832	rab14	90	38.776
ENSELUG00000007123	rab12	82	36.620	ENSELUG00000018921	rab36	78	36.620
ENSELUG00000007123	rab12	85	37.915	ENSELUG00000021148	rab11bb	95	37.915
ENSELUG00000007123	rab12	83	33.333	ENSELUG00000004378	rab9b	97	33.333
ENSELUG00000007123	rab12	64	34.416	ENSELUG00000020788	rab23	74	32.571
ENSELUG00000007123	rab12	65	37.500	ENSELUG00000005597	rab34b	62	37.500
ENSELUG00000007123	rab12	79	36.316	ENSELUG00000010439	-	81	36.316
ENSELUG00000007123	rab12	66	35.220	ENSELUG00000015343	rab22a	82	35.220
ENSELUG00000007123	rab12	83	37.500	ENSELUG00000012035	rab11al	86	37.500
ENSELUG00000007123	rab12	66	31.250	ENSELUG00000008604	rras2	85	31.792
ENSELUG00000007123	rab12	73	36.508	ENSELUG00000002575	rab33ba	77	36.508
ENSELUG00000007123	rab12	71	49.123	ENSELUG00000023815	-	84	49.112
ENSELUG00000007123	rab12	68	35.119	ENSELUG00000016622	rab9a	83	35.119
ENSELUG00000007123	rab12	80	36.458	ENSELUG00000008876	rab6a	89	36.458
ENSELUG00000007123	rab12	78	38.342	ENSELUG00000013219	rab33a	80	38.342
ENSELUG00000007123	rab12	69	35.503	ENSELUG00000021199	RAB9A	77	35.503
ENSELUG00000007123	rab12	77	38.587	ENSELUG00000012060	rab25b	85	38.587
ENSELUG00000007123	rab12	63	31.788	ENSELUG00000003058	KRAS	86	32.934
ENSELUG00000007123	rab12	72	47.674	ENSELUG00000012801	rab13	86	47.674
ENSELUG00000007123	rab12	85	39.234	ENSELUG00000002999	rab11a	95	39.234
ENSELUG00000007123	rab12	72	37.791	ENSELUG00000018516	rab5c	77	37.791
ENSELUG00000007123	rab12	79	37.173	ENSELUG00000022470	rab6bb	91	37.173
ENSELUG00000007123	rab12	75	38.798	ENSELUG00000000175	zgc:100918	88	38.798
ENSELUG00000007123	rab12	69	38.462	ENSELUG00000016682	-	81	38.462
ENSELUG00000007123	rab12	71	41.520	ENSELUG00000023247	si:dkey-16l2.16	81	41.520
ENSELUG00000007123	rab12	65	30.128	ENSELUG00000018367	rheb	79	30.128
ENSELUG00000007123	rab12	84	39.151	ENSELUG00000010345	rab42a	96	39.151

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000007123	rab12	93	84.000	ENSG00000206418	RAB12	100	83.197	Homo_sapiens
ENSELUG00000007123	rab12	90	76.256	ENSAMEG00000007452	RAB12	100	77.586	Ailuropoda_melanoleuca
ENSELUG00000007123	rab12	100	89.344	ENSACIG00000020616	rab12	100	91.393	Amphilophus_citrinellus
ENSELUG00000007123	rab12	100	89.712	ENSAOCG00000002130	rab12	100	91.770	Amphiprion_ocellaris
ENSELUG00000007123	rab12	100	89.712	ENSAPEG00000013255	rab12	100	91.770	Amphiprion_percula
ENSELUG00000007123	rab12	100	89.256	ENSATEG00000019683	rab12	100	90.909	Anabas_testudineus
ENSELUG00000007123	rab12	83	86.500	ENSACAG00000003360	RAB12	90	83.691	Anolis_carolinensis
ENSELUG00000007123	rab12	100	89.300	ENSACLG00000007696	rab12	100	91.358	Astatotilapia_calliptera
ENSELUG00000007123	rab12	100	88.211	ENSAMXG00000004882	rab12	100	89.431	Astyanax_mexicanus
ENSELUG00000007123	rab12	85	85.854	ENSBTAG00000010356	RAB12	100	81.557	Bos_taurus
ENSELUG00000007123	rab12	93	83.186	ENSCJAG00000015468	RAB12	72	82.449	Callithrix_jacchus
ENSELUG00000007123	rab12	93	84.000	ENSCAFG00020023721	RAB12	84	83.197	Canis_lupus_dingo
ENSELUG00000007123	rab12	85	85.854	ENSCHIG00000016103	RAB12	100	81.557	Capra_hircus
ENSELUG00000007123	rab12	87	81.429	ENSCPOG00000022689	RAB12	100	85.714	Cavia_porcellus
ENSELUG00000007123	rab12	93	83.186	ENSCCAG00000022862	RAB12	100	82.449	Cebus_capucinus
ENSELUG00000007123	rab12	85	86.829	ENSCATG00000037784	RAB12	97	84.188	Cercocebus_atys
ENSELUG00000007123	rab12	85	86.829	ENSCSAG00000017569	RAB12	72	81.048	Chlorocebus_sabaeus
ENSELUG00000007123	rab12	90	83.636	ENSCPBG00000028375	RAB12	100	81.224	Chrysemys_picta_bellii
ENSELUG00000007123	rab12	90	82.192	ENSCANG00000031453	RAB12	99	85.845	Colobus_angolensis_palliatus
ENSELUG00000007123	rab12	93	82.589	ENSCGRG00001006958	Rab12	83	81.893	Cricetulus_griseus_chok1gshd
ENSELUG00000007123	rab12	100	88.066	ENSCSEG00000016933	rab12	100	90.535	Cynoglossus_semilaevis
ENSELUG00000007123	rab12	100	86.992	ENSCVAG00000003539	rab12	100	89.024	Cyprinodon_variegatus
ENSELUG00000007123	rab12	100	87.083	ENSDARG00000089428	rab12	100	87.083	Danio_rerio
ENSELUG00000007123	rab12	85	86.829	ENSDNOG00000046064	RAB12	56	83.128	Dasypus_novemcinctus
ENSELUG00000007123	rab12	86	85.096	ENSDORG00000008920	Rab12	100	84.141	Dipodomys_ordii
ENSELUG00000007123	rab12	80	63.021	ENSEBUG00000006581	rab12	92	63.021	Eptatretus_burgeri
ENSELUG00000007123	rab12	93	83.929	ENSEASG00005002926	RAB12	83	83.128	Equus_asinus_asinus
ENSELUG00000007123	rab12	93	83.929	ENSECAG00000007384	RAB12	71	83.128	Equus_caballus
ENSELUG00000007123	rab12	93	84.000	ENSFCAG00000027710	RAB12	72	83.197	Felis_catus
ENSELUG00000007123	rab12	100	87.347	ENSFHEG00000004319	rab12	100	89.796	Fundulus_heteroclitus
ENSELUG00000007123	rab12	86	91.748	ENSGMOG00000012335	rab12	87	91.748	Gadus_morhua
ENSELUG00000007123	rab12	87	85.646	ENSGALG00000033608	RAB12	97	83.058	Gallus_gallus
ENSELUG00000007123	rab12	100	79.424	ENSGACG00000016639	rab12	100	88.479	Gasterosteus_aculeatus
ENSELUG00000007123	rab12	90	83.182	ENSGAGG00000007278	RAB12	100	80.816	Gopherus_agassizii
ENSELUG00000007123	rab12	100	89.300	ENSHBUG00000008497	rab12	100	91.358	Haplochromis_burtoni
ENSELUG00000007123	rab12	95	77.119	ENSHGLG00000006189	RAB12	93	80.672	Heterocephalus_glaber_female
ENSELUG00000007123	rab12	100	87.243	ENSHCOG00000012376	rab12	100	87.243	Hippocampus_comes
ENSELUG00000007123	rab12	100	86.885	ENSIPUG00000017401	rab12	100	86.885	Ictalurus_punctatus
ENSELUG00000007123	rab12	93	80.531	ENSSTOG00000025122	RAB12	99	84.071	Ictidomys_tridecemlineatus
ENSELUG00000007123	rab12	93	81.778	ENSJJAG00000019064	Rab12	99	85.333	Jaculus_jaculus
ENSELUG00000007123	rab12	100	87.917	ENSKMAG00000020056	rab12	100	87.917	Kryptolebias_marmoratus
ENSELUG00000007123	rab12	100	89.669	ENSLBEG00000013756	rab12	100	91.322	Labrus_bergylta
ENSELUG00000007123	rab12	100	79.920	ENSLACG00000010461	RAB12	100	81.124	Latimeria_chalumnae
ENSELUG00000007123	rab12	93	84.716	ENSLOCG00000002680	rab12	100	85.081	Lepisosteus_oculatus
ENSELUG00000007123	rab12	93	82.379	ENSMFAG00000043551	RAB12	100	81.707	Macaca_fascicularis
ENSELUG00000007123	rab12	85	86.829	ENSMNEG00000040853	RAB12	92	84.120	Macaca_nemestrina
ENSELUG00000007123	rab12	100	90.496	ENSMAMG00000006862	rab12	100	92.149	Mastacembelus_armatus
ENSELUG00000007123	rab12	100	89.300	ENSMZEG00005024316	rab12	100	91.358	Maylandia_zebra
ENSELUG00000007123	rab12	84	81.863	ENSMGAG00000009197	RAB12	100	85.784	Meleagris_gallopavo
ENSELUG00000007123	rab12	93	82.589	ENSMAUG00000008371	Rab12	83	81.893	Mesocricetus_auratus
ENSELUG00000007123	rab12	85	86.829	ENSMICG00000030661	RAB12	99	84.388	Microcebus_murinus
ENSELUG00000007123	rab12	90	82.192	ENSMOCG00000000452	Rab12	100	85.845	Microtus_ochrogaster
ENSELUG00000007123	rab12	93	82.379	ENSMODG00000021452	RAB12	73	81.707	Monodelphis_domestica
ENSELUG00000007123	rab12	100	89.256	ENSMALG00000015762	rab12	100	90.496	Monopterus_albus
ENSELUG00000007123	rab12	93	81.250	MGP_CAROLIEiJ_G0021839	Rab12	84	80.658	Mus_caroli
ENSELUG00000007123	rab12	93	81.250	ENSMUSG00000023460	Rab12	100	80.658	Mus_musculus
ENSELUG00000007123	rab12	93	81.250	MGP_PahariEiJ_G0020826	Rab12	100	80.658	Mus_pahari
ENSELUG00000007123	rab12	93	81.250	MGP_SPRETEiJ_G0022750	Rab12	83	80.658	Mus_spretus
ENSELUG00000007123	rab12	93	83.929	ENSMLUG00000002883	RAB12	100	83.128	Myotis_lucifugus
ENSELUG00000007123	rab12	100	72.428	ENSNGAG00000019722	-	100	72.428	Nannospalax_galili
ENSELUG00000007123	rab12	88	85.047	ENSNGAG00000024103	-	99	83.691	Nannospalax_galili
ENSELUG00000007123	rab12	100	89.300	ENSNBRG00000014428	rab12	100	91.358	Neolamprologus_brichardi
ENSELUG00000007123	rab12	93	83.556	ENSNLEG00000006939	RAB12	100	82.787	Nomascus_leucogenys
ENSELUG00000007123	rab12	100	78.455	ENSMEUG00000000493	RAB12	100	81.707	Notamacropus_eugenii
ENSELUG00000007123	rab12	90	81.735	ENSODEG00000006414	RAB12	100	85.388	Octodon_degus
ENSELUG00000007123	rab12	100	88.889	ENSONIG00000018469	rab12	100	90.947	Oreochromis_niloticus
ENSELUG00000007123	rab12	100	88.430	ENSORLG00000003902	rab12	100	90.083	Oryzias_latipes
ENSELUG00000007123	rab12	100	88.017	ENSORLG00020005131	rab12	100	89.669	Oryzias_latipes_hni
ENSELUG00000007123	rab12	100	88.017	ENSORLG00015007869	rab12	100	90.083	Oryzias_latipes_hsok
ENSELUG00000007123	rab12	100	89.256	ENSOMEG00000008191	rab12	100	90.909	Oryzias_melastigma
ENSELUG00000007123	rab12	87	82.857	ENSOGAG00000028002	RAB12	99	86.667	Otolemur_garnettii
ENSELUG00000007123	rab12	80	85.864	ENSOARG00000000728	RAB12	96	78.970	Ovis_aries
ENSELUG00000007123	rab12	85	82.126	ENSPPAG00000009152	RAB12	97	86.408	Pan_paniscus
ENSELUG00000007123	rab12	93	84.000	ENSPPRG00000024521	RAB12	100	83.197	Panthera_pardus
ENSELUG00000007123	rab12	93	84.000	ENSPTRG00000009853	RAB12	100	83.197	Pan_troglodytes
ENSELUG00000007123	rab12	85	86.341	ENSPANG00000009320	RAB12	100	80.972	Papio_anubis
ENSELUG00000007123	rab12	100	85.833	ENSPKIG00000008579	rab12	100	87.552	Paramormyrops_kingsleyae
ENSELUG00000007123	rab12	100	85.537	ENSPMGG00000001890	rab12	100	88.017	Periophthalmus_magnuspinnatus
ENSELUG00000007123	rab12	93	82.143	ENSPEMG00000021032	Rab12	84	81.481	Peromyscus_maniculatus_bairdii
ENSELUG00000007123	rab12	93	82.379	ENSPCIG00000010453	RAB12	61	81.707	Phascolarctos_cinereus
ENSELUG00000007123	rab12	100	88.115	ENSPFOG00000001579	rab12	100	88.525	Poecilia_formosa
ENSELUG00000007123	rab12	100	88.115	ENSPLAG00000013594	rab12	100	88.525	Poecilia_latipinna
ENSELUG00000007123	rab12	100	88.115	ENSPMEG00000010417	rab12	100	88.525	Poecilia_mexicana
ENSELUG00000007123	rab12	100	88.115	ENSPREG00000017487	rab12	100	88.934	Poecilia_reticulata
ENSELUG00000007123	rab12	93	84.000	ENSPPYG00000009015	-	72	83.197	Pongo_abelii
ENSELUG00000007123	rab12	85	86.829	ENSPCAG00000015007	RAB12	100	82.377	Procavia_capensis
ENSELUG00000007123	rab12	93	83.556	ENSPCOG00000019816	RAB12	100	82.787	Propithecus_coquereli
ENSELUG00000007123	rab12	93	84.444	ENSPVAG00000002757	RAB12	100	83.607	Pteropus_vampyrus
ENSELUG00000007123	rab12	100	89.300	ENSPNYG00000023905	rab12	100	91.358	Pundamilia_nyererei
ENSELUG00000007123	rab12	100	89.300	ENSPNYG00000005654	rab12	100	91.358	Pundamilia_nyererei
ENSELUG00000007123	rab12	100	87.805	ENSPNAG00000015031	rab12	100	89.024	Pygocentrus_nattereri
ENSELUG00000007123	rab12	93	79.556	ENSRNOG00000019295	Rab12	100	78.049	Rattus_norvegicus
ENSELUG00000007123	rab12	85	86.829	ENSRBIG00000028760	RAB12	100	84.120	Rhinopithecus_bieti
ENSELUG00000007123	rab12	93	81.778	ENSRROG00000019249	RAB12	94	85.333	Rhinopithecus_roxellana
ENSELUG00000007123	rab12	95	77.922	ENSSBOG00000021125	RAB12	86	80.952	Saimiri_boliviensis_boliviensis
ENSELUG00000007123	rab12	93	80.973	ENSSHAG00000001489	RAB12	100	80.973	Sarcophilus_harrisii
ENSELUG00000007123	rab12	100	89.256	ENSSMAG00000012678	rab12	100	90.909	Scophthalmus_maximus
ENSELUG00000007123	rab12	100	90.083	ENSSDUG00000008505	rab12	100	91.736	Seriola_dumerili
ENSELUG00000007123	rab12	100	90.083	ENSSLDG00000022239	rab12	100	91.736	Seriola_lalandi_dorsalis
ENSELUG00000007123	rab12	85	87.255	ENSSPUG00000003222	RAB12	97	84.454	Sphenodon_punctatus
ENSELUG00000007123	rab12	100	88.889	ENSSPAG00000010822	rab12	100	90.947	Stegastes_partitus
ENSELUG00000007123	rab12	93	82.667	ENSSSCG00000038026	RAB12	100	82.377	Sus_scrofa
ENSELUG00000007123	rab12	87	86.124	ENSTGUG00000009889	RAB12	97	83.471	Taeniopygia_guttata
ENSELUG00000007123	rab12	100	89.669	ENSTRUG00000024455	rab12	100	89.669	Takifugu_rubripes
ENSELUG00000007123	rab12	100	88.017	ENSTNIG00000014859	rab12	100	88.017	Tetraodon_nigroviridis
ENSELUG00000007123	rab12	83	85.500	ENSTTRG00000008711	RAB12	99	84.475	Tursiops_truncatus
ENSELUG00000007123	rab12	93	84.000	ENSUAMG00000018092	RAB12	100	83.197	Ursus_americanus
ENSELUG00000007123	rab12	84	86.139	ENSVVUG00000011748	RAB12	99	85.068	Vulpes_vulpes
ENSELUG00000007123	rab12	93	82.096	ENSXETG00000004289	rab12	79	81.855	Xenopus_tropicalis
ENSELUG00000007123	rab12	100	88.115	ENSXCOG00000019310	rab12	100	88.934	Xiphophorus_couchianus
ENSELUG00000007123	rab12	100	88.115	ENSXMAG00000023617	rab12	100	88.934	Xiphophorus_maculatus