EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000007206 (Gene tree)
Gene ID: -
Gene Symbol: tnrc6c2
Alias: si:dkey-10p5.9
Full Name: trinucleotide repeat-containing gene 6C protein
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 14108 bases
Position: chrLG09:7345688-7359795
Accession: 105029030
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000006278	RRM_1	PF00076.22	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000009215	-	4866	XM_013135377	ENSELUP00000006278	1621 (aa)	XP_012990831	-

Gene Model

Click here to download ENSELUG00000007206's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000007206's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000007206	tnrc6c2	91	57.871	ENSELUG00000008149	-	94	55.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000007206	tnrc6c2	97	74.871	ENSAOCG00000017648	tnrc6c2	87	62.165	Amphiprion_ocellaris
ENSELUG00000007206	tnrc6c2	99	61.317	ENSATEG00000003656	tnrc6c2	100	61.368	Anabas_testudineus
ENSELUG00000007206	tnrc6c2	97	74.227	ENSACLG00000006469	tnrc6c2	88	60.988	Astatotilapia_calliptera
ENSELUG00000007206	tnrc6c2	100	53.537	ENSAMXG00000009579	tnrc6c2	91	54.750	Astyanax_mexicanus
ENSELUG00000007206	tnrc6c2	99	53.985	ENSDARG00000103851	tnrc6c2	91	54.858	Danio_rerio
ENSELUG00000007206	tnrc6c2	100	60.563	ENSFHEG00000003901	tnrc6c2	100	60.449	Fundulus_heteroclitus
ENSELUG00000007206	tnrc6c2	100	60.081	ENSGACG00000019401	tnrc6c2	90	60.454	Gasterosteus_aculeatus
ENSELUG00000007206	tnrc6c2	97	74.227	ENSHBUG00000018310	tnrc6c2	88	60.988	Haplochromis_burtoni
ENSELUG00000007206	tnrc6c2	100	59.395	ENSHCOG00000017802	tnrc6c2	87	59.065	Hippocampus_comes
ENSELUG00000007206	tnrc6c2	100	51.235	ENSIPUG00000022767	tnrc6c2	100	49.591	Ictalurus_punctatus
ENSELUG00000007206	tnrc6c2	59	74.459	ENSMAMG00000001718	tnrc6c2	55	75.000	Mastacembelus_armatus
ENSELUG00000007206	tnrc6c2	97	74.227	ENSMZEG00005023905	tnrc6c2	88	60.988	Maylandia_zebra
ENSELUG00000007206	tnrc6c2	97	73.873	ENSMALG00000020932	tnrc6c2	100	61.530	Monopterus_albus
ENSELUG00000007206	tnrc6c2	99	61.239	ENSNBRG00000000452	tnrc6c2	100	60.454	Neolamprologus_brichardi
ENSELUG00000007206	tnrc6c2	92	65.162	ENSONIG00000018123	tnrc6c2	98	63.452	Oreochromis_niloticus
ENSELUG00000007206	tnrc6c2	59	73.895	ENSORLG00000003327	tnrc6c2	87	60.757	Oryzias_latipes
ENSELUG00000007206	tnrc6c2	59	73.895	ENSORLG00020010730	tnrc6c2	87	60.872	Oryzias_latipes_hni
ENSELUG00000007206	tnrc6c2	100	59.507	ENSORLG00015009232	tnrc6c2	87	60.815	Oryzias_latipes_hsok
ENSELUG00000007206	tnrc6c2	100	61.133	ENSOMEG00000017952	tnrc6c2	87	61.820	Oryzias_melastigma
ENSELUG00000007206	tnrc6c2	99	58.736	ENSPFOG00000011590	tnrc6c2	90	58.985	Poecilia_formosa
ENSELUG00000007206	tnrc6c2	99	63.230	ENSPLAG00000006992	tnrc6c2	100	63.468	Poecilia_latipinna
ENSELUG00000007206	tnrc6c2	99	63.126	ENSPMEG00000012946	tnrc6c2	100	63.365	Poecilia_mexicana
ENSELUG00000007206	tnrc6c2	99	62.262	ENSPREG00000015823	tnrc6c2	100	62.448	Poecilia_reticulata
ENSELUG00000007206	tnrc6c2	97	74.124	ENSPNYG00000002582	tnrc6c2	100	60.818	Pundamilia_nyererei
ENSELUG00000007206	tnrc6c2	100	53.846	ENSPNAG00000026838	tnrc6c2	91	55.275	Pygocentrus_nattereri
ENSELUG00000007206	tnrc6c2	99	59.727	ENSSMAG00000015145	tnrc6c2	100	60.899	Scophthalmus_maximus
ENSELUG00000007206	tnrc6c2	99	61.276	ENSSDUG00000020741	tnrc6c2	100	61.872	Seriola_dumerili
ENSELUG00000007206	tnrc6c2	99	61.162	ENSSLDG00000002077	tnrc6c2	100	61.815	Seriola_lalandi_dorsalis
ENSELUG00000007206	tnrc6c2	100	62.380	ENSSPAG00000013052	tnrc6c2	87	62.251	Stegastes_partitus
ENSELUG00000007206	tnrc6c2	99	56.129	ENSTNIG00000004178	tnrc6c2	95	56.309	Tetraodon_nigroviridis
ENSELUG00000007206	tnrc6c2	99	62.796	ENSXCOG00000013252	tnrc6c2	100	63.317	Xiphophorus_couchianus
ENSELUG00000007206	tnrc6c2	99	60.906	ENSXMAG00000006739	tnrc6c2	100	61.348	Xiphophorus_maculatus