EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000007345 (Gene tree)
Gene ID: 105026701
Gene Symbol: rnaseh2c
Alias: RNH2C
Full Name: ribonuclease H2 subunit C
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 2436 bases
Position: chrLG04:17787467-17789902
Accession: 105026701
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000006449	RNase_H2_suC	PF08615.11	2.5e-18	1	1
ENSELUP00000030175	RNase_H2_suC	PF08615.11	2.5e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000008915	-	750	-	ENSELUP00000006449	135 (aa)	-	C1BZ89
ENSELUT00000008952	-	408	-	ENSELUP00000030175	135 (aa)	-	C1BZ89

Gene Model

Click here to download ENSELUG00000007345's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03030	DNA replication	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000007345's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000007345	rnaseh2c	100	72.993	ENSAPOG00000012901	rnaseh2c	100	72.993	Acanthochromis_polyacanthus
ENSELUG00000007345	rnaseh2c	99	71.852	ENSACIG00000022433	rnaseh2c	99	71.852	Amphilophus_citrinellus
ENSELUG00000007345	rnaseh2c	99	73.333	ENSAOCG00000016855	rnaseh2c	99	73.333	Amphiprion_ocellaris
ENSELUG00000007345	rnaseh2c	99	74.074	ENSAPEG00000009850	rnaseh2c	99	74.074	Amphiprion_percula
ENSELUG00000007345	rnaseh2c	99	74.074	ENSATEG00000014395	rnaseh2c	99	74.074	Anabas_testudineus
ENSELUG00000007345	rnaseh2c	97	69.630	ENSACLG00000016950	rnaseh2c	99	69.630	Astatotilapia_calliptera
ENSELUG00000007345	rnaseh2c	98	70.896	ENSAMXG00000001210	rnaseh2c	99	70.896	Astyanax_mexicanus
ENSELUG00000007345	rnaseh2c	93	50.388	ENSCPBG00000023408	-	93	50.388	Chrysemys_picta_bellii
ENSELUG00000007345	rnaseh2c	100	72.263	ENSCSEG00000005808	rnaseh2c	99	72.263	Cynoglossus_semilaevis
ENSELUG00000007345	rnaseh2c	99	69.630	ENSCVAG00000006337	rnaseh2c	99	69.630	Cyprinodon_variegatus
ENSELUG00000007345	rnaseh2c	100	70.073	ENSDARG00000089637	rnaseh2c	100	70.073	Danio_rerio
ENSELUG00000007345	rnaseh2c	88	49.587	ENSEBUG00000014939	rnaseh2c	76	49.587	Eptatretus_burgeri
ENSELUG00000007345	rnaseh2c	95	67.692	ENSFHEG00000002419	rnaseh2c	94	68.217	Fundulus_heteroclitus
ENSELUG00000007345	rnaseh2c	64	62.500	ENSGMOG00000008727	rnaseh2c	98	62.500	Gadus_morhua
ENSELUG00000007345	rnaseh2c	99	67.407	ENSGAFG00000016755	rnaseh2c	82	67.407	Gambusia_affinis
ENSELUG00000007345	rnaseh2c	93	49.612	ENSGAGG00000008193	-	93	49.612	Gopherus_agassizii
ENSELUG00000007345	rnaseh2c	97	68.889	ENSHBUG00000012806	rnaseh2c	99	68.889	Haplochromis_burtoni
ENSELUG00000007345	rnaseh2c	97	64.444	ENSHCOG00000007177	rnaseh2c	99	64.444	Hippocampus_comes
ENSELUG00000007345	rnaseh2c	97	68.421	ENSIPUG00000018044	rnaseh2c	98	68.421	Ictalurus_punctatus
ENSELUG00000007345	rnaseh2c	99	71.111	ENSKMAG00000004184	rnaseh2c	99	71.111	Kryptolebias_marmoratus
ENSELUG00000007345	rnaseh2c	99	67.647	ENSLBEG00000005742	rnaseh2c	99	67.647	Labrus_bergylta
ENSELUG00000007345	rnaseh2c	84	59.292	ENSLACG00000010120	-	80	59.292	Latimeria_chalumnae
ENSELUG00000007345	rnaseh2c	99	71.852	ENSMAMG00000021610	rnaseh2c	99	71.852	Mastacembelus_armatus
ENSELUG00000007345	rnaseh2c	97	69.630	ENSMZEG00005004796	rnaseh2c	99	69.630	Maylandia_zebra
ENSELUG00000007345	rnaseh2c	95	71.875	ENSMMOG00000002869	rnaseh2c	100	71.875	Mola_mola
ENSELUG00000007345	rnaseh2c	99	71.324	ENSMALG00000012198	rnaseh2c	99	71.324	Monopterus_albus
ENSELUG00000007345	rnaseh2c	97	68.889	ENSNBRG00000001462	rnaseh2c	99	68.889	Neolamprologus_brichardi
ENSELUG00000007345	rnaseh2c	97	68.148	ENSONIG00000005338	rnaseh2c	99	68.148	Oreochromis_niloticus
ENSELUG00000007345	rnaseh2c	99	65.185	ENSORLG00000023473	rnaseh2c	99	65.185	Oryzias_latipes
ENSELUG00000007345	rnaseh2c	99	64.444	ENSORLG00020019053	rnaseh2c	91	64.444	Oryzias_latipes_hni
ENSELUG00000007345	rnaseh2c	99	65.185	ENSORLG00015017067	rnaseh2c	91	65.185	Oryzias_latipes_hsok
ENSELUG00000007345	rnaseh2c	99	67.407	ENSOMEG00000018607	rnaseh2c	99	67.407	Oryzias_melastigma
ENSELUG00000007345	rnaseh2c	99	61.481	ENSPKIG00000019331	rnaseh2c	99	61.481	Paramormyrops_kingsleyae
ENSELUG00000007345	rnaseh2c	99	66.667	ENSPFOG00000009415	rnaseh2c	99	66.667	Poecilia_formosa
ENSELUG00000007345	rnaseh2c	99	67.407	ENSPLAG00000023330	rnaseh2c	99	67.407	Poecilia_latipinna
ENSELUG00000007345	rnaseh2c	99	66.667	ENSPMEG00000003696	rnaseh2c	99	66.667	Poecilia_mexicana
ENSELUG00000007345	rnaseh2c	99	61.644	ENSPREG00000015384	rnaseh2c	72	61.644	Poecilia_reticulata
ENSELUG00000007345	rnaseh2c	97	68.889	ENSPNYG00000014766	rnaseh2c	99	68.889	Pundamilia_nyererei
ENSELUG00000007345	rnaseh2c	99	64.706	ENSPNAG00000019111	rnaseh2c	99	64.706	Pygocentrus_nattereri
ENSELUG00000007345	rnaseh2c	97	67.669	ENSSFOG00015005760	rnaseh2c	97	67.669	Scleropages_formosus
ENSELUG00000007345	rnaseh2c	99	72.593	ENSSMAG00000017738	rnaseh2c	99	72.593	Scophthalmus_maximus
ENSELUG00000007345	rnaseh2c	99	71.111	ENSSDUG00000017285	rnaseh2c	99	71.111	Seriola_dumerili
ENSELUG00000007345	rnaseh2c	99	72.593	ENSSLDG00000016030	rnaseh2c	99	72.593	Seriola_lalandi_dorsalis
ENSELUG00000007345	rnaseh2c	87	53.333	ENSSPUG00000000842	-	89	50.000	Sphenodon_punctatus
ENSELUG00000007345	rnaseh2c	99	71.111	ENSSPAG00000007536	rnaseh2c	99	71.111	Stegastes_partitus
ENSELUG00000007345	rnaseh2c	99	63.704	ENSTRUG00000021845	rnaseh2c	99	63.704	Takifugu_rubripes
ENSELUG00000007345	rnaseh2c	99	66.667	ENSTNIG00000000431	rnaseh2c	99	66.667	Tetraodon_nigroviridis
ENSELUG00000007345	rnaseh2c	93	50.769	ENSXETG00000032466	-	95	50.769	Xenopus_tropicalis
ENSELUG00000007345	rnaseh2c	96	69.466	ENSXCOG00000001611	rnaseh2c	97	69.466	Xiphophorus_couchianus
ENSELUG00000007345	rnaseh2c	99	68.148	ENSXMAG00000003147	rnaseh2c	82	68.148	Xiphophorus_maculatus