EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000007353 (Gene tree)
Gene ID: 105014788
Gene Symbol: rcl1
Alias: -
Full Name: RNA terminal phosphate cyclase like 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 21300 bases
Position: chrLG14:2290661-2311960
Accession: 105014788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000030144	RTC	PF01137.21	2.4e-55	1	1
ENSELUP00000030145	RTC	PF01137.21	7.8e-51	1	1
ENSELUP00000030145	RTC_insert	PF05189.13	4.6e-38	1	1
ENSELUP00000030144	RTC_insert	PF05189.13	5.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000009079	-	3116	-	ENSELUP00000030144	370 (aa)	-	UPI0005769332
ENSELUT00000009054	-	4380	-	ENSELUP00000030145	347 (aa)	-	-

Gene Model

Click here to download ENSELUG00000007353's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000007353's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000007353	rcl1	100	75.936	ENSG00000120158	RCL1	100	77.778	Homo_sapiens
ENSELUG00000007353	rcl1	100	80.914	ENSAPOG00000015666	rcl1	100	80.914	Acanthochromis_polyacanthus
ENSELUG00000007353	rcl1	100	77.273	ENSAMEG00000002631	RCL1	100	77.273	Ailuropoda_melanoleuca
ENSELUG00000007353	rcl1	100	79.839	ENSACIG00000021195	rcl1	100	79.839	Amphilophus_citrinellus
ENSELUG00000007353	rcl1	100	79.570	ENSAOCG00000002223	rcl1	100	79.570	Amphiprion_ocellaris
ENSELUG00000007353	rcl1	100	79.839	ENSAPEG00000006905	rcl1	100	79.839	Amphiprion_percula
ENSELUG00000007353	rcl1	100	81.989	ENSATEG00000020026	rcl1	100	81.989	Anabas_testudineus
ENSELUG00000007353	rcl1	88	73.252	ENSAPLG00000006031	RCL1	100	73.252	Anas_platyrhynchos
ENSELUG00000007353	rcl1	100	70.321	ENSACAG00000003640	RCL1	100	70.321	Anolis_carolinensis
ENSELUG00000007353	rcl1	100	75.936	ENSANAG00000037372	RCL1	100	75.936	Aotus_nancymaae
ENSELUG00000007353	rcl1	100	80.108	ENSACLG00000021724	rcl1	100	80.108	Astatotilapia_calliptera
ENSELUG00000007353	rcl1	99	79.891	ENSAMXG00000033394	rcl1	99	79.891	Astyanax_mexicanus
ENSELUG00000007353	rcl1	99	46.296	WBGene00022852	ZK1127.5	99	46.296	Caenorhabditis_elegans
ENSELUG00000007353	rcl1	100	76.203	ENSCJAG00000011202	RCL1	100	76.203	Callithrix_jacchus
ENSELUG00000007353	rcl1	100	76.471	ENSCAFG00000002091	RCL1	100	76.471	Canis_familiaris
ENSELUG00000007353	rcl1	100	76.471	ENSCAFG00020000638	RCL1	78	76.471	Canis_lupus_dingo
ENSELUG00000007353	rcl1	100	74.866	ENSCHIG00000012407	RCL1	100	74.866	Capra_hircus
ENSELUG00000007353	rcl1	88	77.134	ENSTSYG00000009592	RCL1	97	78.022	Carlito_syrichta
ENSELUG00000007353	rcl1	67	66.272	ENSCAPG00000013575	RCL1	100	66.272	Cavia_aperea
ENSELUG00000007353	rcl1	100	75.936	ENSCPOG00000015354	RCL1	100	75.936	Cavia_porcellus
ENSELUG00000007353	rcl1	100	75.936	ENSCCAG00000033505	RCL1	100	75.936	Cebus_capucinus
ENSELUG00000007353	rcl1	100	75.936	ENSCATG00000034721	RCL1	100	75.936	Cercocebus_atys
ENSELUG00000007353	rcl1	100	75.401	ENSCLAG00000007445	RCL1	100	75.401	Chinchilla_lanigera
ENSELUG00000007353	rcl1	100	75.936	ENSCSAG00000008811	RCL1	100	75.936	Chlorocebus_sabaeus
ENSELUG00000007353	rcl1	92	67.183	ENSCHOG00000007216	RCL1	100	67.183	Choloepus_hoffmanni
ENSELUG00000007353	rcl1	100	74.064	ENSCPBG00000025481	RCL1	94	74.242	Chrysemys_picta_bellii
ENSELUG00000007353	rcl1	100	56.684	ENSCING00000019565	-	99	56.684	Ciona_intestinalis
ENSELUG00000007353	rcl1	100	75.936	ENSCANG00000027099	RCL1	100	75.936	Colobus_angolensis_palliatus
ENSELUG00000007353	rcl1	100	76.471	ENSCGRG00001013748	Rcl1	100	76.471	Cricetulus_griseus_chok1gshd
ENSELUG00000007353	rcl1	88	77.204	ENSCGRG00000005843	Rcl1	99	77.204	Cricetulus_griseus_crigri
ENSELUG00000007353	rcl1	100	79.839	ENSCSEG00000000712	rcl1	98	79.839	Cynoglossus_semilaevis
ENSELUG00000007353	rcl1	100	80.914	ENSCVAG00000011536	rcl1	100	80.914	Cyprinodon_variegatus
ENSELUG00000007353	rcl1	99	79.564	ENSDARG00000038312	rcl1	100	79.564	Danio_rerio
ENSELUG00000007353	rcl1	71	76.316	ENSDNOG00000019911	RCL1	100	78.241	Dasypus_novemcinctus
ENSELUG00000007353	rcl1	99	76.216	ENSDORG00000015645	Rcl1	99	76.216	Dipodomys_ordii
ENSELUG00000007353	rcl1	99	51.587	FBgn0020909	Rtc1	98	52.381	Drosophila_melanogaster
ENSELUG00000007353	rcl1	72	91.304	ENSETEG00000014087	-	82	91.304	Echinops_telfairi
ENSELUG00000007353	rcl1	100	52.957	ENSEBUG00000016621	-	99	52.957	Eptatretus_burgeri
ENSELUG00000007353	rcl1	100	75.936	ENSEASG00005010653	RCL1	100	75.936	Equus_asinus_asinus
ENSELUG00000007353	rcl1	100	76.203	ENSECAG00000015973	RCL1	100	76.203	Equus_caballus
ENSELUG00000007353	rcl1	99	64.324	ENSEEUG00000009801	RCL1	99	64.324	Erinaceus_europaeus
ENSELUG00000007353	rcl1	99	75.676	ENSFCAG00000014557	RCL1	99	75.676	Felis_catus
ENSELUG00000007353	rcl1	99	67.838	ENSFALG00000010553	RCL1	96	67.838	Ficedula_albicollis
ENSELUG00000007353	rcl1	88	75.000	ENSFDAG00000004209	RCL1	100	75.000	Fukomys_damarensis
ENSELUG00000007353	rcl1	100	80.645	ENSFHEG00000011228	rcl1	100	80.645	Fundulus_heteroclitus
ENSELUG00000007353	rcl1	100	77.419	ENSGMOG00000004677	rcl1	100	77.419	Gadus_morhua
ENSELUG00000007353	rcl1	99	71.429	ENSGALG00000015024	RCL1	99	71.429	Gallus_gallus
ENSELUG00000007353	rcl1	100	80.645	ENSGAFG00000007257	rcl1	100	80.645	Gambusia_affinis
ENSELUG00000007353	rcl1	100	81.720	ENSGACG00000017474	rcl1	100	81.720	Gasterosteus_aculeatus
ENSELUG00000007353	rcl1	100	73.797	ENSGAGG00000003689	RCL1	100	73.797	Gopherus_agassizii
ENSELUG00000007353	rcl1	100	75.668	ENSGGOG00000015041	RCL1	100	75.668	Gorilla_gorilla
ENSELUG00000007353	rcl1	100	80.376	ENSHBUG00000001393	rcl1	100	80.376	Haplochromis_burtoni
ENSELUG00000007353	rcl1	100	64.516	ENSHGLG00000005368	-	100	64.516	Heterocephalus_glaber_female
ENSELUG00000007353	rcl1	100	75.134	ENSHGLG00000016452	RCL1	100	75.134	Heterocephalus_glaber_female
ENSELUG00000007353	rcl1	100	64.247	ENSHGLG00100018010	-	100	64.247	Heterocephalus_glaber_male
ENSELUG00000007353	rcl1	100	69.786	ENSHGLG00100008718	-	100	69.786	Heterocephalus_glaber_male
ENSELUG00000007353	rcl1	100	80.376	ENSHCOG00000020170	rcl1	100	80.376	Hippocampus_comes
ENSELUG00000007353	rcl1	100	81.183	ENSIPUG00000018054	RCL1	100	81.183	Ictalurus_punctatus
ENSELUG00000007353	rcl1	100	75.668	ENSSTOG00000000023	RCL1	100	75.668	Ictidomys_tridecemlineatus
ENSELUG00000007353	rcl1	55	58.911	ENSJJAG00000000764	-	98	58.911	Jaculus_jaculus
ENSELUG00000007353	rcl1	99	77.027	ENSJJAG00000022803	-	99	77.027	Jaculus_jaculus
ENSELUG00000007353	rcl1	99	67.568	ENSJJAG00000015632	-	99	67.568	Jaculus_jaculus
ENSELUG00000007353	rcl1	100	80.376	ENSKMAG00000011946	rcl1	100	80.376	Kryptolebias_marmoratus
ENSELUG00000007353	rcl1	100	75.806	ENSLBEG00000003957	rcl1	100	75.806	Labrus_bergylta
ENSELUG00000007353	rcl1	93	76.543	ENSLACG00000004594	RCL1	100	76.398	Latimeria_chalumnae
ENSELUG00000007353	rcl1	100	80.108	ENSLOCG00000010148	rcl1	98	80.108	Lepisosteus_oculatus
ENSELUG00000007353	rcl1	99	74.324	ENSLAFG00000017495	RCL1	99	74.324	Loxodonta_africana
ENSELUG00000007353	rcl1	100	75.936	ENSMFAG00000037906	RCL1	100	75.936	Macaca_fascicularis
ENSELUG00000007353	rcl1	100	75.936	ENSMNEG00000012288	RCL1	100	75.936	Macaca_nemestrina
ENSELUG00000007353	rcl1	100	75.936	ENSMLEG00000043088	RCL1	100	75.936	Mandrillus_leucophaeus
ENSELUG00000007353	rcl1	100	81.989	ENSMAMG00000008311	rcl1	100	81.989	Mastacembelus_armatus
ENSELUG00000007353	rcl1	100	80.108	ENSMZEG00005017292	rcl1	100	80.108	Maylandia_zebra
ENSELUG00000007353	rcl1	58	70.455	ENSMGAG00000002245	RCL1	100	70.455	Meleagris_gallopavo
ENSELUG00000007353	rcl1	58	78.704	ENSMAUG00000008922	Rcl1	100	78.704	Mesocricetus_auratus
ENSELUG00000007353	rcl1	100	76.203	ENSMICG00000015562	RCL1	100	76.203	Microcebus_murinus
ENSELUG00000007353	rcl1	100	76.738	ENSMOCG00000012145	Rcl1	100	76.738	Microtus_ochrogaster
ENSELUG00000007353	rcl1	100	78.016	ENSMMOG00000021264	rcl1	100	78.016	Mola_mola
ENSELUG00000007353	rcl1	95	75.281	ENSMODG00000015377	RCL1	94	75.281	Monodelphis_domestica
ENSELUG00000007353	rcl1	100	80.645	ENSMALG00000018618	rcl1	100	80.645	Monopterus_albus
ENSELUG00000007353	rcl1	100	77.005	MGP_CAROLIEiJ_G0022853	Rcl1	100	77.005	Mus_caroli
ENSELUG00000007353	rcl1	100	76.738	ENSMUSG00000024785	Rcl1	100	76.738	Mus_musculus
ENSELUG00000007353	rcl1	100	77.005	MGP_PahariEiJ_G0014346	Rcl1	100	77.778	Mus_pahari
ENSELUG00000007353	rcl1	100	76.738	MGP_SPRETEiJ_G0023771	Rcl1	100	77.778	Mus_spretus
ENSELUG00000007353	rcl1	100	77.005	ENSMPUG00000004998	RCL1	100	77.005	Mustela_putorius_furo
ENSELUG00000007353	rcl1	100	75.668	ENSMLUG00000009654	RCL1	100	75.668	Myotis_lucifugus
ENSELUG00000007353	rcl1	100	76.471	ENSNGAG00000015327	Rcl1	100	76.471	Nannospalax_galili
ENSELUG00000007353	rcl1	92	77.126	ENSNBRG00000019854	rcl1	99	73.961	Neolamprologus_brichardi
ENSELUG00000007353	rcl1	100	73.797	ENSNLEG00000008891	RCL1	100	73.797	Nomascus_leucogenys
ENSELUG00000007353	rcl1	100	68.717	ENSMEUG00000007653	RCL1	100	68.717	Notamacropus_eugenii
ENSELUG00000007353	rcl1	100	74.866	ENSOPRG00000010965	RCL1	100	74.866	Ochotona_princeps
ENSELUG00000007353	rcl1	88	64.220	ENSODEG00000004151	RCL1	96	64.220	Octodon_degus
ENSELUG00000007353	rcl1	100	80.914	ENSONIG00000003871	rcl1	100	80.914	Oreochromis_niloticus
ENSELUG00000007353	rcl1	66	71.084	ENSOANG00000013193	-	98	71.084	Ornithorhynchus_anatinus
ENSELUG00000007353	rcl1	100	75.668	ENSOCUG00000008161	RCL1	100	75.668	Oryctolagus_cuniculus
ENSELUG00000007353	rcl1	100	77.151	ENSORLG00000010443	rcl1	100	77.151	Oryzias_latipes
ENSELUG00000007353	rcl1	100	77.419	ENSORLG00020012211	rcl1	100	77.419	Oryzias_latipes_hni
ENSELUG00000007353	rcl1	100	76.882	ENSORLG00015001122	rcl1	100	76.882	Oryzias_latipes_hsok
ENSELUG00000007353	rcl1	100	79.570	ENSOMEG00000022976	rcl1	88	79.570	Oryzias_melastigma
ENSELUG00000007353	rcl1	99	76.216	ENSOGAG00000007480	RCL1	99	76.216	Otolemur_garnettii
ENSELUG00000007353	rcl1	100	74.866	ENSOARG00000013463	RCL1	100	74.866	Ovis_aries
ENSELUG00000007353	rcl1	100	75.668	ENSPPAG00000037958	RCL1	100	75.668	Pan_paniscus
ENSELUG00000007353	rcl1	99	75.135	ENSPPRG00000022645	RCL1	99	75.135	Panthera_pardus
ENSELUG00000007353	rcl1	88	75.841	ENSPTIG00000019031	RCL1	100	77.315	Panthera_tigris_altaica
ENSELUG00000007353	rcl1	100	75.401	ENSPTRG00000020743	RCL1	100	75.401	Pan_troglodytes
ENSELUG00000007353	rcl1	100	75.936	ENSPANG00000025151	RCL1	100	75.936	Papio_anubis
ENSELUG00000007353	rcl1	100	80.108	ENSPKIG00000021022	rcl1	100	80.108	Paramormyrops_kingsleyae
ENSELUG00000007353	rcl1	88	73.860	ENSPSIG00000012302	RCL1	100	73.860	Pelodiscus_sinensis
ENSELUG00000007353	rcl1	100	79.032	ENSPMGG00000024007	rcl1	100	79.032	Periophthalmus_magnuspinnatus
ENSELUG00000007353	rcl1	100	77.005	ENSPEMG00000023275	Rcl1	100	77.005	Peromyscus_maniculatus_bairdii
ENSELUG00000007353	rcl1	100	74.599	ENSPCIG00000000188	RCL1	100	74.599	Phascolarctos_cinereus
ENSELUG00000007353	rcl1	100	81.452	ENSPFOG00000019682	rcl1	99	81.452	Poecilia_formosa
ENSELUG00000007353	rcl1	100	81.452	ENSPLAG00000022354	rcl1	100	81.452	Poecilia_latipinna
ENSELUG00000007353	rcl1	100	81.452	ENSPMEG00000008131	rcl1	100	81.452	Poecilia_mexicana
ENSELUG00000007353	rcl1	100	80.914	ENSPREG00000008032	rcl1	100	80.914	Poecilia_reticulata
ENSELUG00000007353	rcl1	100	75.668	ENSPPYG00000019244	RCL1	100	75.668	Pongo_abelii
ENSELUG00000007353	rcl1	99	69.730	ENSPCAG00000001440	RCL1	99	69.730	Procavia_capensis
ENSELUG00000007353	rcl1	100	76.471	ENSPCOG00000009611	RCL1	100	76.471	Propithecus_coquereli
ENSELUG00000007353	rcl1	100	75.936	ENSPVAG00000015752	RCL1	100	75.936	Pteropus_vampyrus
ENSELUG00000007353	rcl1	100	79.839	ENSPNYG00000012910	rcl1	100	79.839	Pundamilia_nyererei
ENSELUG00000007353	rcl1	99	79.620	ENSPNAG00000028307	rcl1	91	79.620	Pygocentrus_nattereri
ENSELUG00000007353	rcl1	100	76.738	ENSRNOG00000015491	Rcl1	100	76.738	Rattus_norvegicus
ENSELUG00000007353	rcl1	100	75.668	ENSRBIG00000035818	RCL1	100	75.668	Rhinopithecus_bieti
ENSELUG00000007353	rcl1	100	75.936	ENSRROG00000029781	RCL1	100	75.936	Rhinopithecus_roxellana
ENSELUG00000007353	rcl1	98	36.785	YOL010W	-	97	36.785	Saccharomyces_cerevisiae
ENSELUG00000007353	rcl1	100	75.936	ENSSBOG00000026369	RCL1	100	75.936	Saimiri_boliviensis_boliviensis
ENSELUG00000007353	rcl1	89	74.924	ENSSHAG00000014086	RCL1	100	74.924	Sarcophilus_harrisii
ENSELUG00000007353	rcl1	100	79.032	ENSSFOG00015023020	rcl1	100	79.032	Scleropages_formosus
ENSELUG00000007353	rcl1	100	80.645	ENSSMAG00000019751	rcl1	86	80.645	Scophthalmus_maximus
ENSELUG00000007353	rcl1	100	80.645	ENSSDUG00000006349	rcl1	100	80.645	Seriola_dumerili
ENSELUG00000007353	rcl1	100	81.183	ENSSLDG00000022076	rcl1	100	81.183	Seriola_lalandi_dorsalis
ENSELUG00000007353	rcl1	100	75.936	ENSSARG00000009260	RCL1	100	75.936	Sorex_araneus
ENSELUG00000007353	rcl1	99	74.054	ENSSPUG00000016330	RCL1	99	74.054	Sphenodon_punctatus
ENSELUG00000007353	rcl1	100	80.645	ENSSPAG00000018038	rcl1	100	80.645	Stegastes_partitus
ENSELUG00000007353	rcl1	100	76.471	ENSSSCG00000005217	RCL1	83	76.471	Sus_scrofa
ENSELUG00000007353	rcl1	99	71.774	ENSTGUG00000005138	RCL1	99	71.774	Taeniopygia_guttata
ENSELUG00000007353	rcl1	100	76.613	ENSTRUG00000010493	rcl1	100	76.613	Takifugu_rubripes
ENSELUG00000007353	rcl1	100	75.806	ENSTNIG00000013214	rcl1	99	75.806	Tetraodon_nigroviridis
ENSELUG00000007353	rcl1	100	71.390	ENSTBEG00000016339	RCL1	100	71.390	Tupaia_belangeri
ENSELUG00000007353	rcl1	100	75.936	ENSTTRG00000016525	RCL1	100	75.936	Tursiops_truncatus
ENSELUG00000007353	rcl1	100	77.273	ENSUAMG00000005598	RCL1	100	79.012	Ursus_americanus
ENSELUG00000007353	rcl1	88	77.439	ENSUMAG00000017890	RCL1	97	77.439	Ursus_maritimus
ENSELUG00000007353	rcl1	88	77.134	ENSVPAG00000009188	RCL1	100	77.134	Vicugna_pacos
ENSELUG00000007353	rcl1	88	77.508	ENSVVUG00000007304	RCL1	89	77.508	Vulpes_vulpes
ENSELUG00000007353	rcl1	100	68.000	ENSXETG00000000592	rcl1	100	68.000	Xenopus_tropicalis
ENSELUG00000007353	rcl1	100	81.183	ENSXCOG00000004922	rcl1	100	81.183	Xiphophorus_couchianus
ENSELUG00000007353	rcl1	100	81.183	ENSXMAG00000022366	RCL1	100	81.183	Xiphophorus_maculatus