EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000007452 (Gene tree)
Gene ID: 105012583
Gene Symbol: oscp1a
Alias: oscp1|zgc:171454
Full Name: LSM10%2C U7 small nuclear RNA associated
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 466 bases
Position: chrLG10:13846974-13847439
Accession: 105012583
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000030290	LSM	PF01423.22	4.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000008700	-	369	XM_010873520	ENSELUP00000030290	122 (aa)	XP_010871822	UPI000576367C

Gene Model

Click here to download ENSELUG00000007452's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000007452's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000007452	oscp1a	98	67.500	ENSG00000181817	LSM10	98	67.500	Homo_sapiens
ENSELUG00000007452	oscp1a	99	69.421	ENSAMEG00000019854	LSM10	98	69.421	Ailuropoda_melanoleuca
ENSELUG00000007452	oscp1a	97	82.203	ENSACIG00000015420	oscp1a	78	82.203	Amphilophus_citrinellus
ENSELUG00000007452	oscp1a	97	80.508	ENSAOCG00000014654	-	98	80.508	Amphiprion_ocellaris
ENSELUG00000007452	oscp1a	97	80.508	ENSAOCG00000015618	LSM10	98	80.508	Amphiprion_ocellaris
ENSELUG00000007452	oscp1a	96	73.504	ENSAOCG00000015607	LSM10	91	73.504	Amphiprion_ocellaris
ENSELUG00000007452	oscp1a	96	73.504	ENSAPEG00000021851	LSM10	91	73.504	Amphiprion_percula
ENSELUG00000007452	oscp1a	97	80.508	ENSAPEG00000021845	-	98	80.508	Amphiprion_percula
ENSELUG00000007452	oscp1a	95	81.034	ENSATEG00000006310	oscp1a	86	81.034	Anabas_testudineus
ENSELUG00000007452	oscp1a	100	62.295	ENSACAG00000001231	LSM10	99	62.295	Anolis_carolinensis
ENSELUG00000007452	oscp1a	100	67.213	ENSANAG00000018759	-	99	67.213	Aotus_nancymaae
ENSELUG00000007452	oscp1a	100	65.574	ENSANAG00000031489	-	100	65.574	Aotus_nancymaae
ENSELUG00000007452	oscp1a	97	83.898	ENSACLG00000004728	oscp1a	96	83.898	Astatotilapia_calliptera
ENSELUG00000007452	oscp1a	95	77.586	ENSAMXG00000025301	oscp1a	96	77.586	Astyanax_mexicanus
ENSELUG00000007452	oscp1a	100	66.393	ENSBTAG00000024096	LSM10	100	66.393	Bos_taurus
ENSELUG00000007452	oscp1a	100	68.033	ENSCJAG00000044880	LSM10	99	68.033	Callithrix_jacchus
ENSELUG00000007452	oscp1a	99	69.421	ENSCAFG00000003382	LSM10	98	69.421	Canis_familiaris
ENSELUG00000007452	oscp1a	99	69.421	ENSCAFG00020008920	LSM10	98	69.421	Canis_lupus_dingo
ENSELUG00000007452	oscp1a	100	66.393	ENSCHIG00000009398	LSM10	100	66.393	Capra_hircus
ENSELUG00000007452	oscp1a	100	69.672	ENSCAPG00000012567	LSM10	99	69.672	Cavia_aperea
ENSELUG00000007452	oscp1a	100	69.672	ENSCPOG00000039302	LSM10	99	69.672	Cavia_porcellus
ENSELUG00000007452	oscp1a	100	67.213	ENSCCAG00000018913	-	99	67.213	Cebus_capucinus
ENSELUG00000007452	oscp1a	100	64.754	ENSCCAG00000008378	-	99	64.754	Cebus_capucinus
ENSELUG00000007452	oscp1a	98	66.667	ENSCATG00000006589	LSM10	98	66.667	Cercocebus_atys
ENSELUG00000007452	oscp1a	99	68.595	ENSCLAG00000008633	LSM10	98	68.595	Chinchilla_lanigera
ENSELUG00000007452	oscp1a	98	66.667	ENSCSAG00000000134	LSM10	98	66.667	Chlorocebus_sabaeus
ENSELUG00000007452	oscp1a	99	66.667	ENSCHOG00000008615	LSM10	98	66.667	Choloepus_hoffmanni
ENSELUG00000007452	oscp1a	78	30.526	ENSCING00000024984	-	83	30.526	Ciona_intestinalis
ENSELUG00000007452	oscp1a	81	30.303	ENSCSAVG00000001896	-	85	30.303	Ciona_savignyi
ENSELUG00000007452	oscp1a	98	66.667	ENSCANG00000019928	LSM10	98	66.667	Colobus_angolensis_palliatus
ENSELUG00000007452	oscp1a	99	67.769	ENSCGRG00001004317	-	99	67.769	Cricetulus_griseus_chok1gshd
ENSELUG00000007452	oscp1a	94	61.538	ENSCGRG00001022673	-	94	61.538	Cricetulus_griseus_chok1gshd
ENSELUG00000007452	oscp1a	94	61.538	ENSCGRG00000015514	-	94	61.538	Cricetulus_griseus_crigri
ENSELUG00000007452	oscp1a	99	67.769	ENSCGRG00000014935	-	99	67.769	Cricetulus_griseus_crigri
ENSELUG00000007452	oscp1a	98	79.167	ENSCSEG00000010374	oscp1a	81	79.167	Cynoglossus_semilaevis
ENSELUG00000007452	oscp1a	97	75.424	ENSCVAG00000001536	oscp1a	89	75.424	Cyprinodon_variegatus
ENSELUG00000007452	oscp1a	99	79.339	ENSDARG00000101222	oscp1a	100	79.339	Danio_rerio
ENSELUG00000007452	oscp1a	70	80.000	ENSDARG00000109563	CABZ01074453.1	99	80.000	Danio_rerio
ENSELUG00000007452	oscp1a	98	69.167	ENSDNOG00000036662	LSM10	98	69.167	Dasypus_novemcinctus
ENSELUG00000007452	oscp1a	99	68.595	ENSDORG00000007579	Lsm10	98	68.595	Dipodomys_ordii
ENSELUG00000007452	oscp1a	100	66.393	ENSETEG00000005703	LSM10	99	66.393	Echinops_telfairi
ENSELUG00000007452	oscp1a	93	50.442	ENSEBUG00000001312	oscp1a	93	50.442	Eptatretus_burgeri
ENSELUG00000007452	oscp1a	99	68.595	ENSEASG00005012194	LSM10	98	68.595	Equus_asinus_asinus
ENSELUG00000007452	oscp1a	99	68.595	ENSECAG00000005071	LSM10	98	68.595	Equus_caballus
ENSELUG00000007452	oscp1a	99	67.769	ENSEEUG00000012032	LSM10	98	67.769	Erinaceus_europaeus
ENSELUG00000007452	oscp1a	100	67.213	ENSFALG00000000851	LSM10	99	67.213	Ficedula_albicollis
ENSELUG00000007452	oscp1a	99	69.421	ENSFDAG00000021056	LSM10	98	69.421	Fukomys_damarensis
ENSELUG00000007452	oscp1a	89	79.091	ENSFHEG00000001058	oscp1a	95	79.091	Fundulus_heteroclitus
ENSELUG00000007452	oscp1a	97	68.644	ENSGMOG00000019832	oscp1a	99	68.644	Gadus_morhua
ENSELUG00000007452	oscp1a	100	68.852	ENSGALG00000002127	LSM10	99	68.852	Gallus_gallus
ENSELUG00000007452	oscp1a	99	65.041	ENSGAFG00000016445	oscp1a	99	65.041	Gambusia_affinis
ENSELUG00000007452	oscp1a	98	83.193	ENSGACG00000002329	oscp1a	98	83.193	Gasterosteus_aculeatus
ENSELUG00000007452	oscp1a	96	68.376	ENSGAGG00000024848	LSM10	95	68.376	Gopherus_agassizii
ENSELUG00000007452	oscp1a	98	67.500	ENSGGOG00000003556	LSM10	98	67.500	Gorilla_gorilla
ENSELUG00000007452	oscp1a	97	84.746	ENSHBUG00000001722	oscp1a	96	84.746	Haplochromis_burtoni
ENSELUG00000007452	oscp1a	99	68.595	ENSHGLG00000011625	LSM10	98	68.595	Heterocephalus_glaber_female
ENSELUG00000007452	oscp1a	99	68.595	ENSHGLG00100001769	LSM10	98	68.595	Heterocephalus_glaber_male
ENSELUG00000007452	oscp1a	87	74.528	ENSIPUG00000005808	oscp1a	92	74.528	Ictalurus_punctatus
ENSELUG00000007452	oscp1a	99	69.421	ENSSTOG00000000606	LSM10	98	69.421	Ictidomys_tridecemlineatus
ENSELUG00000007452	oscp1a	97	81.356	ENSKMAG00000012143	oscp1a	98	81.356	Kryptolebias_marmoratus
ENSELUG00000007452	oscp1a	92	80.357	ENSLBEG00000017764	oscp1a	92	80.357	Labrus_bergylta
ENSELUG00000007452	oscp1a	99	63.636	ENSLACG00000015904	LSM10	93	63.636	Latimeria_chalumnae
ENSELUG00000007452	oscp1a	98	80.833	ENSLOCG00000018277	oscp1a	98	80.833	Lepisosteus_oculatus
ENSELUG00000007452	oscp1a	99	66.942	ENSLAFG00000009600	LSM10	98	66.942	Loxodonta_africana
ENSELUG00000007452	oscp1a	98	66.667	ENSMFAG00000009115	LSM10	98	66.667	Macaca_fascicularis
ENSELUG00000007452	oscp1a	98	66.667	ENSMMUG00000017338	LSM10	98	66.667	Macaca_mulatta
ENSELUG00000007452	oscp1a	98	66.667	ENSMNEG00000020023	LSM10	98	66.667	Macaca_nemestrina
ENSELUG00000007452	oscp1a	98	66.667	ENSMLEG00000025150	LSM10	98	66.667	Mandrillus_leucophaeus
ENSELUG00000007452	oscp1a	98	82.500	ENSMAMG00000004427	oscp1a	98	82.500	Mastacembelus_armatus
ENSELUG00000007452	oscp1a	97	83.898	ENSMZEG00005026307	oscp1a	96	83.898	Maylandia_zebra
ENSELUG00000007452	oscp1a	100	67.213	ENSMGAG00000015707	LSM10	99	67.213	Meleagris_gallopavo
ENSELUG00000007452	oscp1a	99	67.769	ENSMAUG00000016624	Lsm10	99	67.769	Mesocricetus_auratus
ENSELUG00000007452	oscp1a	99	66.942	ENSMOCG00000021943	Lsm10	99	66.942	Microtus_ochrogaster
ENSELUG00000007452	oscp1a	98	83.333	ENSMMOG00000013597	oscp1a	90	83.333	Mola_mola
ENSELUG00000007452	oscp1a	99	72.727	ENSMODG00000023328	LSM10	98	72.727	Monodelphis_domestica
ENSELUG00000007452	oscp1a	52	82.812	ENSMALG00000012661	oscp1a	50	82.812	Monopterus_albus
ENSELUG00000007452	oscp1a	99	66.942	MGP_CAROLIEiJ_G0026467	Lsm10	100	70.968	Mus_caroli
ENSELUG00000007452	oscp1a	99	66.942	ENSMUSG00000050188	Lsm10	100	70.968	Mus_musculus
ENSELUG00000007452	oscp1a	99	66.942	MGP_PahariEiJ_G0028798	Lsm10	100	70.968	Mus_pahari
ENSELUG00000007452	oscp1a	99	66.942	MGP_SPRETEiJ_G0027446	Lsm10	100	70.968	Mus_spretus
ENSELUG00000007452	oscp1a	99	69.421	ENSMPUG00000018593	LSM10	98	69.421	Mustela_putorius_furo
ENSELUG00000007452	oscp1a	100	68.033	ENSMLUG00000023895	LSM10	99	68.033	Myotis_lucifugus
ENSELUG00000007452	oscp1a	99	66.116	ENSNGAG00000015011	Lsm10	98	66.116	Nannospalax_galili
ENSELUG00000007452	oscp1a	97	83.898	ENSNBRG00000014306	oscp1a	96	83.898	Neolamprologus_brichardi
ENSELUG00000007452	oscp1a	98	67.500	ENSNLEG00000033754	LSM10	98	67.500	Nomascus_leucogenys
ENSELUG00000007452	oscp1a	99	72.727	ENSMEUG00000006313	LSM10	98	72.727	Notamacropus_eugenii
ENSELUG00000007452	oscp1a	100	67.213	ENSOPRG00000001699	LSM10	99	67.213	Ochotona_princeps
ENSELUG00000007452	oscp1a	99	68.595	ENSODEG00000019161	LSM10	98	68.595	Octodon_degus
ENSELUG00000007452	oscp1a	98	82.500	ENSONIG00000020904	oscp1a	98	82.500	Oreochromis_niloticus
ENSELUG00000007452	oscp1a	100	69.672	ENSOANG00000002066	LSM10	99	69.672	Ornithorhynchus_anatinus
ENSELUG00000007452	oscp1a	100	67.213	ENSOCUG00000005333	LSM10	99	67.213	Oryctolagus_cuniculus
ENSELUG00000007452	oscp1a	98	78.151	ENSORLG00000009504	oscp1a	98	78.151	Oryzias_latipes
ENSELUG00000007452	oscp1a	98	78.151	ENSORLG00020016201	oscp1a	98	78.151	Oryzias_latipes_hni
ENSELUG00000007452	oscp1a	98	76.471	ENSORLG00015007794	oscp1a	98	76.471	Oryzias_latipes_hsok
ENSELUG00000007452	oscp1a	99	69.421	ENSOGAG00000002653	LSM10	98	69.421	Otolemur_garnettii
ENSELUG00000007452	oscp1a	100	66.393	ENSOARG00000009596	LSM10	100	66.393	Ovis_aries
ENSELUG00000007452	oscp1a	98	67.500	ENSPPAG00000023465	LSM10	98	67.500	Pan_paniscus
ENSELUG00000007452	oscp1a	99	68.595	ENSPPRG00000014619	LSM10	98	68.595	Panthera_pardus
ENSELUG00000007452	oscp1a	99	68.595	ENSPTIG00000004613	LSM10	98	68.595	Panthera_tigris_altaica
ENSELUG00000007452	oscp1a	98	67.500	ENSPTRG00000000539	LSM10	98	67.500	Pan_troglodytes
ENSELUG00000007452	oscp1a	98	66.667	ENSPANG00000023172	LSM10	98	66.667	Papio_anubis
ENSELUG00000007452	oscp1a	98	81.667	ENSPKIG00000003728	oscp1a	97	81.667	Paramormyrops_kingsleyae
ENSELUG00000007452	oscp1a	99	66.116	ENSPSIG00000000590	LSM10	98	66.116	Pelodiscus_sinensis
ENSELUG00000007452	oscp1a	63	74.026	ENSPMGG00000015718	oscp1a	100	74.026	Periophthalmus_magnuspinnatus
ENSELUG00000007452	oscp1a	84	75.728	ENSPCIG00000014865	LSM10	76	75.728	Phascolarctos_cinereus
ENSELUG00000007452	oscp1a	97	72.034	ENSPFOG00000020490	oscp1a	100	72.034	Poecilia_formosa
ENSELUG00000007452	oscp1a	98	71.429	ENSPLAG00000016537	oscp1a	91	71.429	Poecilia_latipinna
ENSELUG00000007452	oscp1a	90	72.727	ENSPMEG00000000174	oscp1a	96	72.727	Poecilia_mexicana
ENSELUG00000007452	oscp1a	97	72.881	ENSPREG00000009899	oscp1a	90	72.881	Poecilia_reticulata
ENSELUG00000007452	oscp1a	98	67.500	ENSPPYG00000001539	LSM10	98	67.500	Pongo_abelii
ENSELUG00000007452	oscp1a	98	66.667	ENSPCAG00000002520	LSM10	98	66.667	Procavia_capensis
ENSELUG00000007452	oscp1a	99	69.421	ENSPVAG00000008644	LSM10	98	69.421	Pteropus_vampyrus
ENSELUG00000007452	oscp1a	97	84.746	ENSPNYG00000003138	oscp1a	96	84.746	Pundamilia_nyererei
ENSELUG00000007452	oscp1a	96	82.051	ENSPNAG00000028829	oscp1a	97	82.051	Pygocentrus_nattereri
ENSELUG00000007452	oscp1a	99	66.116	ENSRNOG00000025716	Lsm10	99	66.116	Rattus_norvegicus
ENSELUG00000007452	oscp1a	98	66.667	ENSRBIG00000001561	LSM10	98	66.667	Rhinopithecus_bieti
ENSELUG00000007452	oscp1a	98	66.667	ENSRROG00000011414	LSM10	98	66.667	Rhinopithecus_roxellana
ENSELUG00000007452	oscp1a	100	67.213	ENSSBOG00000036413	-	99	67.213	Saimiri_boliviensis_boliviensis
ENSELUG00000007452	oscp1a	99	72.727	ENSSHAG00000018056	LSM10	98	72.727	Sarcophilus_harrisii
ENSELUG00000007452	oscp1a	100	73.770	ENSSFOG00015019954	lsm10	100	73.770	Scleropages_formosus
ENSELUG00000007452	oscp1a	94	85.217	ENSSMAG00000001297	oscp1a	98	85.217	Scophthalmus_maximus
ENSELUG00000007452	oscp1a	95	79.310	ENSSDUG00000007090	oscp1a	94	79.310	Seriola_dumerili
ENSELUG00000007452	oscp1a	95	78.448	ENSSLDG00000000800	oscp1a	96	78.448	Seriola_lalandi_dorsalis
ENSELUG00000007452	oscp1a	88	72.897	ENSSARG00000004211	LSM10	98	67.480	Sorex_araneus
ENSELUG00000007452	oscp1a	95	85.345	ENSSPAG00000009229	oscp1a	96	85.345	Stegastes_partitus
ENSELUG00000007452	oscp1a	100	66.393	ENSSSCG00000038916	LSM10	99	66.393	Sus_scrofa
ENSELUG00000007452	oscp1a	100	67.213	ENSTGUG00000001602	-	100	67.213	Taeniopygia_guttata
ENSELUG00000007452	oscp1a	100	66.393	ENSTGUG00000001600	-	100	66.393	Taeniopygia_guttata
ENSELUG00000007452	oscp1a	100	77.049	ENSTRUG00000010531	oscp1a	98	77.049	Takifugu_rubripes
ENSELUG00000007452	oscp1a	100	66.393	ENSTBEG00000016674	LSM10	99	66.393	Tupaia_belangeri
ENSELUG00000007452	oscp1a	99	69.421	ENSUAMG00000020265	LSM10	98	69.421	Ursus_americanus
ENSELUG00000007452	oscp1a	99	69.421	ENSUMAG00000001438	LSM10	56	69.421	Ursus_maritimus
ENSELUG00000007452	oscp1a	99	69.421	ENSVVUG00000023209	LSM10	98	69.421	Vulpes_vulpes
ENSELUG00000007452	oscp1a	99	61.983	ENSXETG00000027631	lsm10	98	61.983	Xenopus_tropicalis
ENSELUG00000007452	oscp1a	98	73.109	ENSXCOG00000018776	oscp1a	75	73.109	Xiphophorus_couchianus
ENSELUG00000007452	oscp1a	93	73.451	ENSXMAG00000019963	oscp1a	90	73.451	Xiphophorus_maculatus