EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000007495 (Gene tree)
Gene ID: 105019383
Gene Symbol: si:dkey-37o8.1
Alias: fi12b10|wu:fi12b10
Full Name: elongation factor 1-alpha
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 2722 bases
Position: chrLG21:1636026-1638747
Accession: 105019383
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000006631	GTP_EFTU	PF00009.27	3.2e-55	1	1
ENSELUP00000006631	MMR_HSR1	PF01926.23	2.8e-08	1	1
ENSELUP00000006631	GTP_EFTU_D2	PF03144.25	3e-10	1	1
ENSELUP00000006631	GTP_EFTU_D3	PF03143.17	1.8e-35	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000008617	-	1926	XM_010885535	ENSELUP00000006631	458 (aa)	XP_010883837	UPI000577ABD8

Gene Model

Click here to download ENSELUG00000007495's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000007495's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000007495	si:dkey-37o8.1	96	37.188	ENSELUG00000019323	-	80	35.892
ENSELUG00000007495	si:dkey-37o8.1	100	70.742	ENSELUG00000023536	eef1a1l1	98	70.742
ENSELUG00000007495	si:dkey-37o8.1	100	69.481	ENSELUG00000012084	eef1a1b	100	69.481
ENSELUG00000007495	si:dkey-37o8.1	94	36.490	ENSELUG00000023492	gspt1l	73	36.322

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000007495	si:dkey-37o8.1	99	84.513	ENSAPOG00000016459	si:dkey-37o8.1	99	84.513	Acanthochromis_polyacanthus
ENSELUG00000007495	si:dkey-37o8.1	95	81.922	ENSACIG00000020985	si:dkey-37o8.1	82	81.922	Amphilophus_citrinellus
ENSELUG00000007495	si:dkey-37o8.1	100	85.153	ENSAOCG00000002663	si:dkey-37o8.1	100	85.153	Amphiprion_ocellaris
ENSELUG00000007495	si:dkey-37o8.1	100	85.153	ENSAPEG00000012670	si:dkey-37o8.1	100	85.153	Amphiprion_percula
ENSELUG00000007495	si:dkey-37o8.1	92	84.834	ENSATEG00000002217	si:dkey-37o8.1	99	84.834	Anabas_testudineus
ENSELUG00000007495	si:dkey-37o8.1	100	83.843	ENSACLG00000003519	si:dkey-37o8.1	100	83.843	Astatotilapia_calliptera
ENSELUG00000007495	si:dkey-37o8.1	100	86.245	ENSAMXG00000002728	si:dkey-37o8.1	100	86.245	Astyanax_mexicanus
ENSELUG00000007495	si:dkey-37o8.1	99	72.210	ENSCPBG00000020570	-	90	72.368	Chrysemys_picta_bellii
ENSELUG00000007495	si:dkey-37o8.1	100	79.348	ENSCSEG00000019807	si:dkey-37o8.1	100	78.495	Cynoglossus_semilaevis
ENSELUG00000007495	si:dkey-37o8.1	99	83.297	ENSCVAG00000009828	si:dkey-37o8.1	99	83.297	Cyprinodon_variegatus
ENSELUG00000007495	si:dkey-37o8.1	100	82.533	ENSDARG00000071727	si:dkey-37o8.1	95	82.533	Danio_rerio
ENSELUG00000007495	si:dkey-37o8.1	100	83.624	ENSFHEG00000017452	si:dkey-37o8.1	100	83.624	Fundulus_heteroclitus
ENSELUG00000007495	si:dkey-37o8.1	99	76.923	ENSGMOG00000006122	si:dkey-37o8.1	100	76.923	Gadus_morhua
ENSELUG00000007495	si:dkey-37o8.1	98	79.688	ENSGAFG00000000367	si:dkey-37o8.1	99	79.688	Gambusia_affinis
ENSELUG00000007495	si:dkey-37o8.1	100	81.223	ENSGACG00000004505	si:dkey-37o8.1	100	81.223	Gasterosteus_aculeatus
ENSELUG00000007495	si:dkey-37o8.1	99	73.246	ENSGAGG00000007724	-	97	76.923	Gopherus_agassizii
ENSELUG00000007495	si:dkey-37o8.1	100	83.624	ENSHBUG00000015515	si:dkey-37o8.1	100	83.624	Haplochromis_burtoni
ENSELUG00000007495	si:dkey-37o8.1	98	75.893	ENSHCOG00000001215	si:dkey-37o8.1	99	75.893	Hippocampus_comes
ENSELUG00000007495	si:dkey-37o8.1	100	83.624	ENSIPUG00000004067	si:dkey-37o8.1	100	83.624	Ictalurus_punctatus
ENSELUG00000007495	si:dkey-37o8.1	100	82.533	ENSKMAG00000015910	si:dkey-37o8.1	100	82.533	Kryptolebias_marmoratus
ENSELUG00000007495	si:dkey-37o8.1	100	84.279	ENSLBEG00000021334	si:dkey-37o8.1	90	84.279	Labrus_bergylta
ENSELUG00000007495	si:dkey-37o8.1	99	77.802	ENSLACG00000003948	si:dkey-37o8.1	99	77.802	Latimeria_chalumnae
ENSELUG00000007495	si:dkey-37o8.1	100	82.135	ENSLOCG00000011245	si:dkey-37o8.1	100	82.135	Lepisosteus_oculatus
ENSELUG00000007495	si:dkey-37o8.1	99	72.124	ENSMAMG00000009907	si:dkey-37o8.1	95	72.124	Mastacembelus_armatus
ENSELUG00000007495	si:dkey-37o8.1	100	83.843	ENSMZEG00005018358	si:dkey-37o8.1	100	83.843	Maylandia_zebra
ENSELUG00000007495	si:dkey-37o8.1	98	84.375	ENSMMOG00000004111	si:dkey-37o8.1	98	84.375	Mola_mola
ENSELUG00000007495	si:dkey-37o8.1	95	77.169	ENSMALG00000017152	si:dkey-37o8.1	99	77.169	Monopterus_albus
ENSELUG00000007495	si:dkey-37o8.1	100	84.061	ENSNBRG00000013552	si:dkey-37o8.1	100	84.061	Neolamprologus_brichardi
ENSELUG00000007495	si:dkey-37o8.1	100	83.406	ENSONIG00000006165	si:dkey-37o8.1	100	83.406	Oreochromis_niloticus
ENSELUG00000007495	si:dkey-37o8.1	100	84.498	ENSORLG00000019066	si:dkey-37o8.1	100	84.498	Oryzias_latipes
ENSELUG00000007495	si:dkey-37o8.1	100	84.498	ENSORLG00020008094	si:dkey-37o8.1	100	84.498	Oryzias_latipes_hni
ENSELUG00000007495	si:dkey-37o8.1	100	84.498	ENSORLG00015008410	si:dkey-37o8.1	100	84.498	Oryzias_latipes_hsok
ENSELUG00000007495	si:dkey-37o8.1	100	84.061	ENSOMEG00000001868	si:dkey-37o8.1	100	84.061	Oryzias_melastigma
ENSELUG00000007495	si:dkey-37o8.1	100	83.007	ENSPKIG00000017246	si:dkey-37o8.1	100	83.007	Paramormyrops_kingsleyae
ENSELUG00000007495	si:dkey-37o8.1	60	67.972	ENSPSIG00000008080	-	99	67.972	Pelodiscus_sinensis
ENSELUG00000007495	si:dkey-37o8.1	100	84.061	ENSPFOG00000013173	si:dkey-37o8.1	100	84.061	Poecilia_formosa
ENSELUG00000007495	si:dkey-37o8.1	100	83.406	ENSPLAG00000010405	si:dkey-37o8.1	100	83.406	Poecilia_latipinna
ENSELUG00000007495	si:dkey-37o8.1	100	84.498	ENSPMEG00000015233	si:dkey-37o8.1	100	84.498	Poecilia_mexicana
ENSELUG00000007495	si:dkey-37o8.1	99	83.956	ENSPREG00000006280	si:dkey-37o8.1	100	83.956	Poecilia_reticulata
ENSELUG00000007495	si:dkey-37o8.1	100	83.188	ENSPNYG00000002059	si:dkey-37o8.1	100	83.188	Pundamilia_nyererei
ENSELUG00000007495	si:dkey-37o8.1	100	84.716	ENSPNAG00000009990	si:dkey-37o8.1	100	84.716	Pygocentrus_nattereri
ENSELUG00000007495	si:dkey-37o8.1	98	83.929	ENSSFOG00015019070	si:dkey-37o8.1	98	83.929	Scleropages_formosus
ENSELUG00000007495	si:dkey-37o8.1	100	84.934	ENSSMAG00000016143	si:dkey-37o8.1	100	84.934	Scophthalmus_maximus
ENSELUG00000007495	si:dkey-37o8.1	98	85.045	ENSSDUG00000009163	si:dkey-37o8.1	98	85.045	Seriola_dumerili
ENSELUG00000007495	si:dkey-37o8.1	98	85.268	ENSSLDG00000023761	si:dkey-37o8.1	98	85.268	Seriola_lalandi_dorsalis
ENSELUG00000007495	si:dkey-37o8.1	99	71.116	ENSSPUG00000007467	-	99	71.116	Sphenodon_punctatus
ENSELUG00000007495	si:dkey-37o8.1	100	84.934	ENSSPAG00000013856	si:dkey-37o8.1	100	84.934	Stegastes_partitus
ENSELUG00000007495	si:dkey-37o8.1	97	85.169	ENSTRUG00000009006	si:dkey-37o8.1	99	85.169	Takifugu_rubripes
ENSELUG00000007495	si:dkey-37o8.1	98	82.927	ENSTNIG00000017138	si:dkey-37o8.1	97	82.927	Tetraodon_nigroviridis
ENSELUG00000007495	si:dkey-37o8.1	96	76.993	ENSXETG00000017744	42Sp50	98	75.664	Xenopus_tropicalis
ENSELUG00000007495	si:dkey-37o8.1	99	83.516	ENSXCOG00000012296	si:dkey-37o8.1	100	86.813	Xiphophorus_couchianus
ENSELUG00000007495	si:dkey-37o8.1	100	84.061	ENSXMAG00000001998	si:dkey-37o8.1	100	84.061	Xiphophorus_maculatus