EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000007510 (Gene tree)
Gene ID: 105015132
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 6661 bases
Position: chrLG14:19897052-19903712
Accession: 105015132
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000006635	PRP4	PF08799.11	2.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000008607	-	3142	XM_010878013	ENSELUP00000006635	506 (aa)	XP_010876315	UPI0006619A28

Gene Model

Click here to download ENSELUG00000007510's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000007510's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000007510	prpf4	60	30.568	ENSELUG00000007394	tbl3	57	30.568
ENSELUG00000007510	prpf4	58	31.395	ENSELUG00000020276	-	56	31.395
ENSELUG00000007510	prpf4	58	31.875	ENSELUG00000015504	poc1a	72	31.875

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000007510	prpf4	99	80.990	ENSG00000136875	PRPF4	97	80.990	Homo_sapiens
ENSELUG00000007510	prpf4	99	80.952	ENSAPOG00000014132	prpf4	99	80.952	Acanthochromis_polyacanthus
ENSELUG00000007510	prpf4	99	80.792	ENSAMEG00000013048	PRPF4	95	80.792	Ailuropoda_melanoleuca
ENSELUG00000007510	prpf4	100	81.373	ENSACIG00000005579	prpf4	100	81.373	Amphilophus_citrinellus
ENSELUG00000007510	prpf4	100	80.588	ENSAOCG00000005457	prpf4	100	80.588	Amphiprion_ocellaris
ENSELUG00000007510	prpf4	100	80.392	ENSAPEG00000000776	prpf4	100	80.392	Amphiprion_percula
ENSELUG00000007510	prpf4	100	81.176	ENSATEG00000023013	prpf4	100	81.176	Anabas_testudineus
ENSELUG00000007510	prpf4	99	80.792	ENSAPLG00000006534	PRPF4	94	80.792	Anas_platyrhynchos
ENSELUG00000007510	prpf4	99	80.118	ENSACAG00000015110	PRPF4	97	80.118	Anolis_carolinensis
ENSELUG00000007510	prpf4	99	80.792	ENSANAG00000022464	PRPF4	93	80.792	Aotus_nancymaae
ENSELUG00000007510	prpf4	100	80.588	ENSACLG00000019031	prpf4	100	80.588	Astatotilapia_calliptera
ENSELUG00000007510	prpf4	100	68.642	ENSAMXG00000006756	prpf4	100	81.657	Astyanax_mexicanus
ENSELUG00000007510	prpf4	99	80.792	ENSBTAG00000004571	PRPF4	97	80.792	Bos_taurus
ENSELUG00000007510	prpf4	93	44.000	WBGene00007972	prp-4	96	44.000	Caenorhabditis_elegans
ENSELUG00000007510	prpf4	99	80.792	ENSCJAG00000017856	PRPF4	97	80.792	Callithrix_jacchus
ENSELUG00000007510	prpf4	99	80.792	ENSCAFG00000003224	PRPF4	94	80.792	Canis_familiaris
ENSELUG00000007510	prpf4	99	80.792	ENSCAFG00020022637	PRPF4	97	80.792	Canis_lupus_dingo
ENSELUG00000007510	prpf4	99	80.792	ENSCHIG00000024648	-	97	80.792	Capra_hircus
ENSELUG00000007510	prpf4	99	80.792	ENSTSYG00000010366	PRPF4	97	80.792	Carlito_syrichta
ENSELUG00000007510	prpf4	91	72.554	ENSCAPG00000008935	PRPF4	97	72.554	Cavia_aperea
ENSELUG00000007510	prpf4	99	80.594	ENSCPOG00000010747	-	97	80.594	Cavia_porcellus
ENSELUG00000007510	prpf4	99	76.040	ENSCPOG00000014729	-	97	76.040	Cavia_porcellus
ENSELUG00000007510	prpf4	99	80.594	ENSCCAG00000028990	PRPF4	97	80.594	Cebus_capucinus
ENSELUG00000007510	prpf4	99	80.792	ENSCATG00000021552	PRPF4	97	80.792	Cercocebus_atys
ENSELUG00000007510	prpf4	99	80.990	ENSCLAG00000013448	PRPF4	97	80.990	Chinchilla_lanigera
ENSELUG00000007510	prpf4	89	80.088	ENSCHOG00000007233	PRPF4	100	80.088	Choloepus_hoffmanni
ENSELUG00000007510	prpf4	100	79.290	ENSCPBG00000019136	PRPF4	73	79.290	Chrysemys_picta_bellii
ENSELUG00000007510	prpf4	99	58.218	ENSCING00000001299	-	97	58.218	Ciona_intestinalis
ENSELUG00000007510	prpf4	99	57.791	ENSCSAVG00000009178	-	99	59.091	Ciona_savignyi
ENSELUG00000007510	prpf4	99	80.792	ENSCANG00000003246	PRPF4	97	80.792	Colobus_angolensis_palliatus
ENSELUG00000007510	prpf4	99	80.792	ENSCGRG00001016992	Prpf4	97	80.792	Cricetulus_griseus_chok1gshd
ENSELUG00000007510	prpf4	99	80.792	ENSCGRG00000017560	Prpf4	97	80.792	Cricetulus_griseus_crigri
ENSELUG00000007510	prpf4	99	81.151	ENSCSEG00000020451	prpf4	99	81.151	Cynoglossus_semilaevis
ENSELUG00000007510	prpf4	100	87.179	ENSDARG00000067639	prpf4	100	87.179	Danio_rerio
ENSELUG00000007510	prpf4	99	80.792	ENSDNOG00000013203	PRPF4	97	80.792	Dasypus_novemcinctus
ENSELUG00000007510	prpf4	99	80.396	ENSDORG00000026275	Prpf4	97	80.396	Dipodomys_ordii
ENSELUG00000007510	prpf4	99	49.636	FBgn0036733	U4-U6-60K	99	50.364	Drosophila_melanogaster
ENSELUG00000007510	prpf4	99	80.792	ENSETEG00000020389	PRPF4	97	80.792	Echinops_telfairi
ENSELUG00000007510	prpf4	99	69.300	ENSEBUG00000015229	prpf4	88	69.526	Eptatretus_burgeri
ENSELUG00000007510	prpf4	99	80.792	ENSEASG00005022678	PRPF4	97	80.792	Equus_asinus_asinus
ENSELUG00000007510	prpf4	99	80.792	ENSECAG00000007072	PRPF4	97	80.792	Equus_caballus
ENSELUG00000007510	prpf4	84	83.264	ENSEEUG00000007480	PRPF4	96	64.626	Erinaceus_europaeus
ENSELUG00000007510	prpf4	99	80.792	ENSFCAG00000005514	PRPF4	97	80.792	Felis_catus
ENSELUG00000007510	prpf4	99	78.507	ENSFALG00000005423	PRPF4	85	78.507	Ficedula_albicollis
ENSELUG00000007510	prpf4	99	80.990	ENSFDAG00000005839	PRPF4	97	80.990	Fukomys_damarensis
ENSELUG00000007510	prpf4	100	80.196	ENSFHEG00000001300	prpf4	100	80.196	Fundulus_heteroclitus
ENSELUG00000007510	prpf4	99	80.632	ENSGALG00000008857	PRPF4	94	80.632	Gallus_gallus
ENSELUG00000007510	prpf4	94	75.380	ENSGAFG00000012164	prpf4	69	75.380	Gambusia_affinis
ENSELUG00000007510	prpf4	100	73.281	ENSGACG00000015476	prpf4	100	73.281	Gasterosteus_aculeatus
ENSELUG00000007510	prpf4	100	79.290	ENSGAGG00000025029	PRPF4	94	79.290	Gopherus_agassizii
ENSELUG00000007510	prpf4	99	80.990	ENSGGOG00000006943	PRPF4	97	80.990	Gorilla_gorilla
ENSELUG00000007510	prpf4	100	80.588	ENSHBUG00000000562	prpf4	100	80.588	Haplochromis_burtoni
ENSELUG00000007510	prpf4	99	64.950	ENSHGLG00000003838	-	97	64.950	Heterocephalus_glaber_female
ENSELUG00000007510	prpf4	96	69.199	ENSHGLG00000016628	-	95	69.815	Heterocephalus_glaber_female
ENSELUG00000007510	prpf4	99	80.594	ENSHGLG00000015191	PRPF4	97	80.594	Heterocephalus_glaber_female
ENSELUG00000007510	prpf4	99	64.950	ENSHGLG00100005571	-	97	64.950	Heterocephalus_glaber_male
ENSELUG00000007510	prpf4	100	87.771	ENSIPUG00000017956	PRPF4	100	87.771	Ictalurus_punctatus
ENSELUG00000007510	prpf4	99	80.396	ENSSTOG00000027833	PRPF4	97	80.396	Ictidomys_tridecemlineatus
ENSELUG00000007510	prpf4	99	80.792	ENSJJAG00000008838	Prpf4	97	80.792	Jaculus_jaculus
ENSELUG00000007510	prpf4	100	80.980	ENSKMAG00000013236	prpf4	100	80.980	Kryptolebias_marmoratus
ENSELUG00000007510	prpf4	100	81.102	ENSLBEG00000020611	prpf4	100	81.102	Labrus_bergylta
ENSELUG00000007510	prpf4	100	76.621	ENSLACG00000016317	PRPF4	97	76.621	Latimeria_chalumnae
ENSELUG00000007510	prpf4	100	85.799	ENSLOCG00000000581	prpf4	100	85.799	Lepisosteus_oculatus
ENSELUG00000007510	prpf4	99	80.792	ENSLAFG00000018225	PRPF4	97	80.792	Loxodonta_africana
ENSELUG00000007510	prpf4	99	80.594	ENSMFAG00000039397	PRPF4	97	80.594	Macaca_fascicularis
ENSELUG00000007510	prpf4	99	80.792	ENSMMUG00000005844	PRPF4	97	80.792	Macaca_mulatta
ENSELUG00000007510	prpf4	99	72.277	ENSMNEG00000033737	PRPF4	97	72.277	Macaca_nemestrina
ENSELUG00000007510	prpf4	99	80.792	ENSMLEG00000040284	PRPF4	97	80.792	Mandrillus_leucophaeus
ENSELUG00000007510	prpf4	99	80.671	ENSMAMG00000020141	prpf4	99	80.671	Mastacembelus_armatus
ENSELUG00000007510	prpf4	100	80.588	ENSMZEG00005023205	prpf4	100	80.588	Maylandia_zebra
ENSELUG00000007510	prpf4	99	80.040	ENSMGAG00000001796	PRPF4	94	80.040	Meleagris_gallopavo
ENSELUG00000007510	prpf4	99	80.792	ENSMAUG00000018022	Prpf4	97	80.792	Mesocricetus_auratus
ENSELUG00000007510	prpf4	99	80.990	ENSMICG00000015022	PRPF4	97	80.990	Microcebus_murinus
ENSELUG00000007510	prpf4	99	80.396	ENSMOCG00000018273	Prpf4	97	80.396	Microtus_ochrogaster
ENSELUG00000007510	prpf4	99	81.349	ENSMMOG00000021177	prpf4	99	81.349	Mola_mola
ENSELUG00000007510	prpf4	99	80.594	ENSMODG00000004444	-	97	80.594	Monodelphis_domestica
ENSELUG00000007510	prpf4	99	80.396	ENSMODG00000025096	-	94	80.396	Monodelphis_domestica
ENSELUG00000007510	prpf4	100	81.569	ENSMALG00000013624	prpf4	100	81.569	Monopterus_albus
ENSELUG00000007510	prpf4	99	80.792	MGP_CAROLIEiJ_G0026078	Prpf4	97	80.792	Mus_caroli
ENSELUG00000007510	prpf4	99	80.792	ENSMUSG00000066148	Prpf4	97	80.792	Mus_musculus
ENSELUG00000007510	prpf4	99	80.990	MGP_PahariEiJ_G0028413	Prpf4	97	80.990	Mus_pahari
ENSELUG00000007510	prpf4	99	80.792	MGP_SPRETEiJ_G0027042	Prpf4	97	80.792	Mus_spretus
ENSELUG00000007510	prpf4	99	80.792	ENSMPUG00000007883	PRPF4	97	80.792	Mustela_putorius_furo
ENSELUG00000007510	prpf4	99	79.802	ENSMLUG00000008626	-	94	79.802	Myotis_lucifugus
ENSELUG00000007510	prpf4	99	81.188	ENSMLUG00000015309	-	94	81.188	Myotis_lucifugus
ENSELUG00000007510	prpf4	99	75.446	ENSNGAG00000000468	Prpf4	97	75.446	Nannospalax_galili
ENSELUG00000007510	prpf4	100	80.784	ENSNBRG00000007972	prpf4	100	80.784	Neolamprologus_brichardi
ENSELUG00000007510	prpf4	99	80.792	ENSNLEG00000016647	PRPF4	97	80.792	Nomascus_leucogenys
ENSELUG00000007510	prpf4	99	80.198	ENSMEUG00000013256	PRPF4	98	80.198	Notamacropus_eugenii
ENSELUG00000007510	prpf4	99	80.594	ENSOPRG00000005302	PRPF4	97	80.594	Ochotona_princeps
ENSELUG00000007510	prpf4	99	80.990	ENSODEG00000018147	PRPF4	97	80.990	Octodon_degus
ENSELUG00000007510	prpf4	100	80.980	ENSONIG00000012671	prpf4	100	80.980	Oreochromis_niloticus
ENSELUG00000007510	prpf4	99	80.594	ENSOCUG00000005046	PRPF4	97	80.594	Oryctolagus_cuniculus
ENSELUG00000007510	prpf4	100	79.684	ENSORLG00000019641	prpf4	100	79.684	Oryzias_latipes
ENSELUG00000007510	prpf4	100	79.684	ENSORLG00020019438	prpf4	100	79.684	Oryzias_latipes_hni
ENSELUG00000007510	prpf4	100	78.501	ENSOMEG00000020941	prpf4	100	78.958	Oryzias_melastigma
ENSELUG00000007510	prpf4	99	76.634	ENSOGAG00000007802	PRPF4	95	76.634	Otolemur_garnettii
ENSELUG00000007510	prpf4	99	80.792	ENSOARG00000006319	PRPF4	94	80.792	Ovis_aries
ENSELUG00000007510	prpf4	99	80.990	ENSPPAG00000041797	PRPF4	97	80.990	Pan_paniscus
ENSELUG00000007510	prpf4	99	80.792	ENSPPRG00000014360	PRPF4	97	80.792	Panthera_pardus
ENSELUG00000007510	prpf4	99	80.792	ENSPTIG00000009574	PRPF4	97	80.792	Panthera_tigris_altaica
ENSELUG00000007510	prpf4	99	80.990	ENSPTRG00000021274	PRPF4	97	80.990	Pan_troglodytes
ENSELUG00000007510	prpf4	99	80.792	ENSPANG00000025776	PRPF4	93	80.792	Papio_anubis
ENSELUG00000007510	prpf4	100	87.747	ENSPKIG00000017259	prpf4	100	87.747	Paramormyrops_kingsleyae
ENSELUG00000007510	prpf4	100	79.093	ENSPSIG00000010713	PRPF4	89	79.093	Pelodiscus_sinensis
ENSELUG00000007510	prpf4	100	59.335	ENSPMGG00000000997	prpf4	98	60.074	Periophthalmus_magnuspinnatus
ENSELUG00000007510	prpf4	99	80.792	ENSPEMG00000024115	Prpf4	97	80.792	Peromyscus_maniculatus_bairdii
ENSELUG00000007510	prpf4	99	80.396	ENSPCIG00000003821	PRPF4	98	80.396	Phascolarctos_cinereus
ENSELUG00000007510	prpf4	100	72.763	ENSPFOG00000013524	prpf4	99	75.076	Poecilia_formosa
ENSELUG00000007510	prpf4	93	74.154	ENSPLAG00000011620	prpf4	99	71.429	Poecilia_latipinna
ENSELUG00000007510	prpf4	98	75.811	ENSPMEG00000006813	prpf4	100	75.811	Poecilia_mexicana
ENSELUG00000007510	prpf4	99	80.594	ENSPCAG00000002561	PRPF4	98	80.594	Procavia_capensis
ENSELUG00000007510	prpf4	99	80.792	ENSPCOG00000011975	PRPF4	97	80.792	Propithecus_coquereli
ENSELUG00000007510	prpf4	99	77.822	ENSPVAG00000004708	PRPF4	97	77.822	Pteropus_vampyrus
ENSELUG00000007510	prpf4	100	80.588	ENSPNYG00000008013	prpf4	100	80.588	Pundamilia_nyererei
ENSELUG00000007510	prpf4	100	88.166	ENSPNAG00000000697	prpf4	100	88.166	Pygocentrus_nattereri
ENSELUG00000007510	prpf4	99	80.792	ENSRNOG00000014777	Prpf4	97	80.792	Rattus_norvegicus
ENSELUG00000007510	prpf4	99	80.792	ENSRBIG00000040221	PRPF4	97	80.792	Rhinopithecus_bieti
ENSELUG00000007510	prpf4	99	80.792	ENSRROG00000040240	PRPF4	97	80.792	Rhinopithecus_roxellana
ENSELUG00000007510	prpf4	99	80.396	ENSSHAG00000017658	PRPF4	97	80.396	Sarcophilus_harrisii
ENSELUG00000007510	prpf4	100	87.574	ENSSFOG00015008963	prpf4	100	87.574	Scleropages_formosus
ENSELUG00000007510	prpf4	100	80.392	ENSSMAG00000008889	prpf4	100	80.392	Scophthalmus_maximus
ENSELUG00000007510	prpf4	99	81.366	ENSSDUG00000022083	prpf4	94	81.366	Seriola_dumerili
ENSELUG00000007510	prpf4	99	81.781	ENSSLDG00000008115	prpf4	94	81.781	Seriola_lalandi_dorsalis
ENSELUG00000007510	prpf4	99	79.842	ENSSPUG00000015582	PRPF4	97	79.842	Sphenodon_punctatus
ENSELUG00000007510	prpf4	100	75.049	ENSSPAG00000011286	prpf4	100	75.049	Stegastes_partitus
ENSELUG00000007510	prpf4	99	80.792	ENSSSCG00000024648	PRPF4	97	80.792	Sus_scrofa
ENSELUG00000007510	prpf4	97	80.325	ENSTGUG00000002623	PRPF4	100	80.368	Taeniopygia_guttata
ENSELUG00000007510	prpf4	99	80.632	ENSTRUG00000008853	prpf4	99	80.632	Takifugu_rubripes
ENSELUG00000007510	prpf4	99	80.357	ENSTNIG00000013250	prpf4	99	80.357	Tetraodon_nigroviridis
ENSELUG00000007510	prpf4	99	74.257	ENSTBEG00000000821	PRPF4	97	74.257	Tupaia_belangeri
ENSELUG00000007510	prpf4	89	81.395	ENSTTRG00000003246	PRPF4	85	81.395	Tursiops_truncatus
ENSELUG00000007510	prpf4	70	70.704	ENSUAMG00000018288	PRPF4	96	70.704	Ursus_americanus
ENSELUG00000007510	prpf4	99	80.198	ENSUMAG00000019375	PRPF4	97	80.198	Ursus_maritimus
ENSELUG00000007510	prpf4	99	80.792	ENSVPAG00000005281	PRPF4	97	80.792	Vicugna_pacos
ENSELUG00000007510	prpf4	99	80.396	ENSVVUG00000002476	PRPF4	99	80.396	Vulpes_vulpes
ENSELUG00000007510	prpf4	71	58.217	ENSXCOG00000006101	prpf4	93	61.139	Xiphophorus_couchianus
ENSELUG00000007510	prpf4	91	65.733	ENSXMAG00000002750	prpf4	99	68.369	Xiphophorus_maculatus