EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000007716 (Gene tree)
Gene ID: 105011748
Gene Symbol: zgc:171480
Alias: -
Full Name: mitochondrial ribosomal protein L55
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 6216 bases
Position: chrLG08:19003305-19009520
Accession: 105011748
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000006869	Mitoc_L55	PF09776.9	2.6e-45	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000008207	-	5561	XM_010872048	ENSELUP00000006869	131 (aa)	XP_010870350	UPI00057805E1

Gene Model

Click here to download ENSELUG00000007716's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000007716's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000007716	zgc:171480	78	59.804	ENSAPOG00000002881	zgc:171480	70	59.804	Acanthochromis_polyacanthus
ENSELUG00000007716	zgc:171480	100	50.758	ENSACIG00000001646	zgc:171480	96	50.758	Amphilophus_citrinellus
ENSELUG00000007716	zgc:171480	79	59.223	ENSAOCG00000016155	zgc:171480	71	59.223	Amphiprion_ocellaris
ENSELUG00000007716	zgc:171480	79	59.223	ENSAPEG00000022327	zgc:171480	71	59.223	Amphiprion_percula
ENSELUG00000007716	zgc:171480	79	60.194	ENSATEG00000005625	zgc:171480	69	60.194	Anabas_testudineus
ENSELUG00000007716	zgc:171480	88	59.483	ENSACAG00000006897	-	91	59.483	Anolis_carolinensis
ENSELUG00000007716	zgc:171480	79	57.282	ENSACLG00000005172	zgc:171480	74	57.282	Astatotilapia_calliptera
ENSELUG00000007716	zgc:171480	100	66.412	ENSAMXG00000043839	zgc:171480	99	66.412	Astyanax_mexicanus
ENSELUG00000007716	zgc:171480	88	58.621	ENSCPBG00000001771	-	92	58.621	Chrysemys_picta_bellii
ENSELUG00000007716	zgc:171480	89	55.556	ENSCSEG00000019533	zgc:171480	82	56.410	Cynoglossus_semilaevis
ENSELUG00000007716	zgc:171480	93	59.200	ENSDARG00000043402	zgc:171480	90	59.836	Danio_rerio
ENSELUG00000007716	zgc:171480	75	47.959	ENSFALG00000001083	-	100	47.959	Ficedula_albicollis
ENSELUG00000007716	zgc:171480	53	53.623	ENSFALG00000001082	-	51	50.667	Ficedula_albicollis
ENSELUG00000007716	zgc:171480	79	55.238	ENSFHEG00000000203	zgc:171480	74	55.238	Fundulus_heteroclitus
ENSELUG00000007716	zgc:171480	76	62.000	ENSGMOG00000019009	zgc:171480	97	62.000	Gadus_morhua
ENSELUG00000007716	zgc:171480	76	52.000	ENSGALG00000038820	-	87	52.000	Gallus_gallus
ENSELUG00000007716	zgc:171480	79	57.143	ENSGAFG00000004832	-	72	57.143	Gambusia_affinis
ENSELUG00000007716	zgc:171480	70	64.130	ENSGACG00000002136	zgc:171480	99	66.304	Gasterosteus_aculeatus
ENSELUG00000007716	zgc:171480	89	58.120	ENSGAGG00000001806	-	94	58.120	Gopherus_agassizii
ENSELUG00000007716	zgc:171480	79	57.282	ENSHBUG00000007895	zgc:171480	74	57.282	Haplochromis_burtoni
ENSELUG00000007716	zgc:171480	80	59.048	ENSHCOG00000003526	zgc:171480	57	59.048	Hippocampus_comes
ENSELUG00000007716	zgc:171480	100	65.649	ENSIPUG00000001273	mrpl55	99	65.649	Ictalurus_punctatus
ENSELUG00000007716	zgc:171480	79	58.654	ENSKMAG00000002011	zgc:171480	80	58.654	Kryptolebias_marmoratus
ENSELUG00000007716	zgc:171480	88	56.522	ENSLBEG00000016107	-	90	56.522	Labrus_bergylta
ENSELUG00000007716	zgc:171480	88	56.522	ENSLBEG00000010915	zgc:171480	90	56.522	Labrus_bergylta
ENSELUG00000007716	zgc:171480	83	64.348	ENSLACG00000016281	zgc:171480	88	62.069	Latimeria_chalumnae
ENSELUG00000007716	zgc:171480	79	61.165	ENSMAMG00000022250	zgc:171480	69	61.165	Mastacembelus_armatus
ENSELUG00000007716	zgc:171480	79	57.282	ENSMZEG00005015585	zgc:171480	74	57.282	Maylandia_zebra
ENSELUG00000007716	zgc:171480	76	54.000	ENSMGAG00000002612	-	87	54.000	Meleagris_gallopavo
ENSELUG00000007716	zgc:171480	79	50.485	ENSMMOG00000008740	-	77	50.485	Mola_mola
ENSELUG00000007716	zgc:171480	85	56.250	ENSMALG00000019823	zgc:171480	88	56.250	Monopterus_albus
ENSELUG00000007716	zgc:171480	79	56.311	ENSNBRG00000019447	zgc:171480	74	56.311	Neolamprologus_brichardi
ENSELUG00000007716	zgc:171480	79	57.282	ENSONIG00000007645	zgc:171480	76	57.282	Oreochromis_niloticus
ENSELUG00000007716	zgc:171480	76	53.000	ENSORLG00020006963	zgc:171480	74	53.000	Oryzias_latipes_hni
ENSELUG00000007716	zgc:171480	76	53.000	ENSORLG00015003266	zgc:171480	74	53.000	Oryzias_latipes_hsok
ENSELUG00000007716	zgc:171480	79	53.398	ENSOMEG00000008184	zgc:171480	74	53.398	Oryzias_melastigma
ENSELUG00000007716	zgc:171480	100	59.848	ENSPKIG00000006753	zgc:171480	100	59.848	Paramormyrops_kingsleyae
ENSELUG00000007716	zgc:171480	88	55.172	ENSPSIG00000010893	-	92	55.172	Pelodiscus_sinensis
ENSELUG00000007716	zgc:171480	79	56.311	ENSPMGG00000012657	-	80	56.311	Periophthalmus_magnuspinnatus
ENSELUG00000007716	zgc:171480	70	46.316	ENSPMAG00000000867	zgc:171480	98	41.732	Petromyzon_marinus
ENSELUG00000007716	zgc:171480	89	53.846	ENSPCIG00000021848	-	93	53.846	Phascolarctos_cinereus
ENSELUG00000007716	zgc:171480	100	48.227	ENSPFOG00000012703	zgc:171480	99	48.227	Poecilia_formosa
ENSELUG00000007716	zgc:171480	100	48.936	ENSPREG00000020328	zgc:171480	99	48.936	Poecilia_reticulata
ENSELUG00000007716	zgc:171480	100	64.122	ENSPNAG00000017309	zgc:171480	99	64.122	Pygocentrus_nattereri
ENSELUG00000007716	zgc:171480	88	60.345	ENSSFOG00015015668	mrpl55	89	60.345	Scleropages_formosus
ENSELUG00000007716	zgc:171480	79	57.282	ENSSMAG00000005429	zgc:171480	73	57.282	Scophthalmus_maximus
ENSELUG00000007716	zgc:171480	100	51.799	ENSSDUG00000022556	zgc:171480	94	51.799	Seriola_dumerili
ENSELUG00000007716	zgc:171480	100	52.518	ENSSLDG00000019598	zgc:171480	94	52.518	Seriola_lalandi_dorsalis
ENSELUG00000007716	zgc:171480	88	56.410	ENSSPUG00000000735	-	92	56.410	Sphenodon_punctatus
ENSELUG00000007716	zgc:171480	100	53.521	ENSSPAG00000011598	zgc:171480	99	53.521	Stegastes_partitus
ENSELUG00000007716	zgc:171480	79	59.615	ENSTRUG00000003082	zgc:171480	73	59.615	Takifugu_rubripes
ENSELUG00000007716	zgc:171480	81	55.140	ENSXCOG00000005887	zgc:171480	80	55.140	Xiphophorus_couchianus
ENSELUG00000007716	zgc:171480	89	50.000	ENSXMAG00000007937	zgc:171480	87	50.000	Xiphophorus_maculatus