EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000007730 (Gene tree)
Gene ID: 105017694
Gene Symbol: rbm25b
Alias: fi03e10|rbm25|si:ch211-105d18.5|wu:fi03e10|zgc:56208
Full Name: RNA binding motif protein 25
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 13772 bases
Position: chrLG18:9713287-9727058
Accession: 105017694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000006871	RRM_1	PF00076.22	5.7e-09	1	1
ENSELUP00000030544	RRM_1	PF00076.22	6.2e-09	1	1
ENSELUP00000006871	PWI	PF01480.17	1.3e-13	1	1
ENSELUP00000030544	PWI	PF01480.17	1.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000008158	-	2650	XM_010882513	ENSELUP00000030544	875 (aa)	XP_010880815	-
ENSELUT00000008196	-	2481	-	ENSELUP00000006871	826 (aa)	-	-

Gene Model

Click here to download ENSELUG00000007730's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000007730's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000007730	rbm25b	89	72.000	ENSELUG00000021847	rbm25a	65	79.920

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000007730	rbm25b	56	76.282	ENSAPOG00000017757	rbm25a	55	73.160	Acanthochromis_polyacanthus
ENSELUG00000007730	rbm25b	58	76.409	ENSAPOG00000015321	rbm25b	58	77.938	Acanthochromis_polyacanthus
ENSELUG00000007730	rbm25b	56	74.304	ENSACIG00000019482	rbm25a	56	71.843	Amphilophus_citrinellus
ENSELUG00000007730	rbm25b	51	83.146	ENSAOCG00000013695	rbm25a	56	71.784	Amphiprion_ocellaris
ENSELUG00000007730	rbm25b	58	74.691	ENSAOCG00000019308	rbm25b	57	73.499	Amphiprion_ocellaris
ENSELUG00000007730	rbm25b	51	83.146	ENSAPEG00000007514	rbm25a	57	72.521	Amphiprion_percula
ENSELUG00000007730	rbm25b	59	77.800	ENSAPEG00000009666	rbm25b	60	78.306	Amphiprion_percula
ENSELUG00000007730	rbm25b	58	73.706	ENSATEG00000020676	rbm25a	63	69.048	Anabas_testudineus
ENSELUG00000007730	rbm25b	51	90.132	ENSATEG00000017312	rbm25b	100	76.014	Anabas_testudineus
ENSELUG00000007730	rbm25b	54	71.082	ENSAPLG00000006643	RBM25	85	70.807	Anas_platyrhynchos
ENSELUG00000007730	rbm25b	89	71.339	ENSACLG00000027482	rbm25a	89	79.600	Astatotilapia_calliptera
ENSELUG00000007730	rbm25b	59	81.200	ENSACLG00000024359	rbm25b	58	78.395	Astatotilapia_calliptera
ENSELUG00000007730	rbm25b	55	32.533	WBGene00012245	W04D2.6	58	41.781	Caenorhabditis_elegans
ENSELUG00000007730	rbm25b	59	76.613	ENSCJAG00000014441	-	98	65.188	Callithrix_jacchus
ENSELUG00000007730	rbm25b	51	77.419	ENSCAPG00000005239	RBM25	77	79.348	Cavia_aperea
ENSELUG00000007730	rbm25b	56	76.210	ENSCATG00000039651	RBM25	98	65.188	Cercocebus_atys
ENSELUG00000007730	rbm25b	63	80.000	ENSCHOG00000008903	RBM25	62	82.609	Choloepus_hoffmanni
ENSELUG00000007730	rbm25b	55	63.576	ENSCANG00000043874	RBM25	98	65.188	Colobus_angolensis_palliatus
ENSELUG00000007730	rbm25b	75	86.331	ENSCGRG00001020817	Rbm25	85	80.478	Cricetulus_griseus_chok1gshd
ENSELUG00000007730	rbm25b	51	81.977	ENSCSEG00000009430	rbm25a	58	70.954	Cynoglossus_semilaevis
ENSELUG00000007730	rbm25b	59	76.375	ENSCSEG00000020737	rbm25b	58	76.240	Cynoglossus_semilaevis
ENSELUG00000007730	rbm25b	100	72.414	ENSCVAG00000003478	rbm25b	58	72.746	Cyprinodon_variegatus
ENSELUG00000007730	rbm25b	60	68.242	ENSCVAG00000005498	rbm25a	95	78.571	Cyprinodon_variegatus
ENSELUG00000007730	rbm25b	51	83.212	ENSDARG00000039266	rbm25a	99	97.468	Danio_rerio
ENSELUG00000007730	rbm25b	72	35.981	ENSEBUG00000002963	rbm25b	58	59.028	Eptatretus_burgeri
ENSELUG00000007730	rbm25b	74	84.615	ENSEEUG00000007350	RBM25	78	80.478	Erinaceus_europaeus
ENSELUG00000007730	rbm25b	55	70.705	ENSFALG00000005445	RBM25	51	70.393	Ficedula_albicollis
ENSELUG00000007730	rbm25b	93	68.881	ENSFHEG00000005318	rbm25a	51	65.584	Fundulus_heteroclitus
ENSELUG00000007730	rbm25b	51	86.667	ENSFHEG00000003513	rbm25b	99	73.780	Fundulus_heteroclitus
ENSELUG00000007730	rbm25b	73	86.957	ENSGMOG00000014070	rbm25a	79	87.402	Gadus_morhua
ENSELUG00000007730	rbm25b	99	66.941	ENSGAFG00000001092	rbm25b	100	70.130	Gambusia_affinis
ENSELUG00000007730	rbm25b	100	69.776	ENSGAFG00000018036	rbm25a	53	72.198	Gambusia_affinis
ENSELUG00000007730	rbm25b	56	81.124	ENSGAGG00000024524	RBM25	84	81.275	Gopherus_agassizii
ENSELUG00000007730	rbm25b	56	74.573	ENSHBUG00000016908	rbm25a	57	72.990	Haplochromis_burtoni
ENSELUG00000007730	rbm25b	59	81.600	ENSHBUG00000018499	rbm25b	58	78.601	Haplochromis_burtoni
ENSELUG00000007730	rbm25b	100	69.477	ENSHCOG00000000142	rbm25b	58	71.183	Hippocampus_comes
ENSELUG00000007730	rbm25b	60	69.126	ENSKMAG00000016242	rbm25a	55	70.742	Kryptolebias_marmoratus
ENSELUG00000007730	rbm25b	59	84.800	ENSKMAG00000018826	rbm25b	58	75.000	Kryptolebias_marmoratus
ENSELUG00000007730	rbm25b	100	77.081	ENSLBEG00000010667	rbm25b	58	77.049	Labrus_bergylta
ENSELUG00000007730	rbm25b	52	79.200	ENSLACG00000011845	RBM25	54	70.348	Latimeria_chalumnae
ENSELUG00000007730	rbm25b	56	76.210	ENSMFAG00000040040	RBM25	98	65.188	Macaca_fascicularis
ENSELUG00000007730	rbm25b	56	76.210	ENSMLEG00000035157	RBM25	98	65.188	Mandrillus_leucophaeus
ENSELUG00000007730	rbm25b	59	85.657	ENSMAMG00000004524	rbm25b	100	78.795	Mastacembelus_armatus
ENSELUG00000007730	rbm25b	85	69.438	ENSMAMG00000000165	rbm25a	51	70.481	Mastacembelus_armatus
ENSELUG00000007730	rbm25b	56	74.573	ENSMZEG00005011183	rbm25a	57	72.990	Maylandia_zebra
ENSELUG00000007730	rbm25b	59	81.200	ENSMZEG00005001453	rbm25b	58	78.395	Maylandia_zebra
ENSELUG00000007730	rbm25b	54	71.082	ENSMGAG00000011707	RBM25	89	69.170	Meleagris_gallopavo
ENSELUG00000007730	rbm25b	58	72.671	ENSMMOG00000009065	rbm25a	57	71.253	Mola_mola
ENSELUG00000007730	rbm25b	100	78.436	ENSMMOG00000015545	rbm25b	63	77.160	Mola_mola
ENSELUG00000007730	rbm25b	59	77.459	ENSMALG00000020441	rbm25b	85	85.317	Monopterus_albus
ENSELUG00000007730	rbm25b	51	67.188	ENSMALG00000020459	rbm25a	80	79.681	Monopterus_albus
ENSELUG00000007730	rbm25b	52	80.321	MGP_SPRETEiJ_G0018766	-	96	70.745	Mus_spretus
ENSELUG00000007730	rbm25b	56	74.786	ENSNBRG00000003761	rbm25a	57	73.196	Neolamprologus_brichardi
ENSELUG00000007730	rbm25b	88	80.400	ENSOCUG00000013737	RBM25	85	69.937	Oryctolagus_cuniculus
ENSELUG00000007730	rbm25b	51	83.240	ENSORLG00000011874	rbm25b	58	70.935	Oryzias_latipes
ENSELUG00000007730	rbm25b	51	83.240	ENSORLG00020016422	rbm25b	58	70.935	Oryzias_latipes_hni
ENSELUG00000007730	rbm25b	51	82.682	ENSORLG00015011269	rbm25b	58	70.935	Oryzias_latipes_hsok
ENSELUG00000007730	rbm25b	53	72.609	ENSOMEG00000022138	rbm25a	59	70.179	Oryzias_melastigma
ENSELUG00000007730	rbm25b	59	80.586	ENSOMEG00000023172	rbm25b	58	75.926	Oryzias_melastigma
ENSELUG00000007730	rbm25b	56	76.210	ENSPANG00000018212	RBM25	98	65.188	Papio_anubis
ENSELUG00000007730	rbm25b	58	77.778	ENSPKIG00000003203	rbm25b	57	77.433	Paramormyrops_kingsleyae
ENSELUG00000007730	rbm25b	55	70.925	ENSPSIG00000006058	RBM25	86	70.600	Pelodiscus_sinensis
ENSELUG00000007730	rbm25b	53	62.642	ENSPMGG00000001791	rbm25a	84	85.981	Periophthalmus_magnuspinnatus
ENSELUG00000007730	rbm25b	99	73.600	ENSPMGG00000015740	rbm25b	58	74.200	Periophthalmus_magnuspinnatus
ENSELUG00000007730	rbm25b	55	76.356	ENSPFOG00000018808	rbm25b	100	75.801	Poecilia_formosa
ENSELUG00000007730	rbm25b	100	70.436	ENSPLAG00000018338	rbm25a	61	67.167	Poecilia_latipinna
ENSELUG00000007730	rbm25b	55	76.356	ENSPMEG00000019161	rbm25b	100	75.919	Poecilia_mexicana
ENSELUG00000007730	rbm25b	100	70.318	ENSPMEG00000024470	rbm25a	63	67.167	Poecilia_mexicana
ENSELUG00000007730	rbm25b	51	68.527	ENSPMEG00000012262	rbm25b	100	74.447	Poecilia_mexicana
ENSELUG00000007730	rbm25b	55	77.706	ENSPREG00000008522	rbm25b	100	75.149	Poecilia_reticulata
ENSELUG00000007730	rbm25b	56	74.200	ENSPREG00000009228	rbm25a	58	70.909	Poecilia_reticulata
ENSELUG00000007730	rbm25b	70	86.331	ENSPCAG00000006226	RBM25	76	80.400	Procavia_capensis
ENSELUG00000007730	rbm25b	50	79.600	ENSPNYG00000022596	rbm25a	52	72.017	Pundamilia_nyererei
ENSELUG00000007730	rbm25b	59	79.839	ENSRNOG00000002871	Rbm25l1	54	69.838	Rattus_norvegicus
ENSELUG00000007730	rbm25b	56	80.242	ENSRROG00000035556	RBM25	92	80.400	Rhinopithecus_roxellana
ENSELUG00000007730	rbm25b	62	79.839	ENSSBOG00000034153	RBM25	69	80.400	Saimiri_boliviensis_boliviensis
ENSELUG00000007730	rbm25b	58	77.131	ENSSFOG00015007093	rbm25	58	76.605	Scleropages_formosus
ENSELUG00000007730	rbm25b	58	76.812	ENSSMAG00000009745	rbm25a	58	72.016	Scophthalmus_maximus
ENSELUG00000007730	rbm25b	100	75.180	ENSSMAG00000002520	rbm25b	58	75.000	Scophthalmus_maximus
ENSELUG00000007730	rbm25b	56	75.803	ENSSDUG00000017984	rbm25a	58	72.822	Seriola_dumerili
ENSELUG00000007730	rbm25b	56	75.803	ENSSLDG00000010342	rbm25a	57	72.822	Seriola_lalandi_dorsalis
ENSELUG00000007730	rbm25b	100	74.880	ENSSLDG00000024573	rbm25b	97	79.654	Seriola_lalandi_dorsalis
ENSELUG00000007730	rbm25b	100	78.046	ENSSPAG00000016168	rbm25b	100	77.885	Stegastes_partitus
ENSELUG00000007730	rbm25b	56	74.262	ENSSPAG00000011114	rbm25a	58	73.931	Stegastes_partitus
ENSELUG00000007730	rbm25b	55	70.485	ENSTGUG00000011246	-	52	70.186	Taeniopygia_guttata
ENSELUG00000007730	rbm25b	51	84.064	ENSTRUG00000017964	rbm25b	58	77.273	Takifugu_rubripes
ENSELUG00000007730	rbm25b	58	71.933	ENSTRUG00000003076	rbm25a	58	71.800	Takifugu_rubripes
ENSELUG00000007730	rbm25b	96	67.436	ENSTNIG00000012222	rbm25b	54	85.465	Tetraodon_nigroviridis
ENSELUG00000007730	rbm25b	55	78.862	ENSTBEG00000010538	-	53	78.862	Tupaia_belangeri
ENSELUG00000007730	rbm25b	56	80.242	ENSUAMG00000007707	RBM25	99	68.320	Ursus_americanus
ENSELUG00000007730	rbm25b	79	80.242	ENSVPAG00000009052	RBM25	82	80.080	Vicugna_pacos
ENSELUG00000007730	rbm25b	82	80.242	ENSXETG00000021857	rbm25	50	81.879	Xenopus_tropicalis
ENSELUG00000007730	rbm25b	100	70.012	ENSXCOG00000004043	RBM25	53	72.688	Xiphophorus_couchianus
ENSELUG00000007730	rbm25b	88	73.705	ENSXCOG00000002222	rbm25b	100	71.565	Xiphophorus_couchianus
ENSELUG00000007730	rbm25b	90	83.730	ENSXMAG00000017290	rbm25b	100	74.822	Xiphophorus_maculatus
ENSELUG00000007730	rbm25b	100	67.283	ENSXMAG00000009077	RBM25	60	67.490	Xiphophorus_maculatus