EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSELUG00000007737 (Gene tree)
Gene ID
105021811
Gene Symbol
RUXF
Alias
snrpfl
Full Name
small nuclear ribonucleoprotein F
Gene Type
protein_coding
Species
Esox_lucius
Status
putative
Strand
Minus strand
Length
1423 bases
Position
chrLG19:13021962-13023384
Accession
105021811
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSELUP00000030504LSMPF01423.224.3e-2011
ENSELUP00000030506LSMPF01423.229.5e-2011
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSELUT00000008139-533XM_010889740ENSELUP0000003050487 (aa)XP_010888042C1BW11
ENSELUT00000008141-354-ENSELUP00000030506117 (aa)--
Gene Model
Click here to download ENSELUG00000007737's gene model file
Pathways
Pathway IDPathway NameSource
els03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000007737's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSELUG00000007737RUXF7646.970ENSELUG00000014301LSM68346.970
ENSELUG00000007737RUXF9996.512ENSELUG00000003121RUXF10096.512
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSELUG00000007737RUXF8693.333ENSG00000139343SNRPF10091.860Homo_sapiens
ENSELUG00000007737RUXF8595.946ENSAPOG00000003377snrpf6694.118Acanthochromis_polyacanthus
ENSELUG00000007737RUXF8780.263ENSAMEG00000018718-10080.233Ailuropoda_melanoleuca
ENSELUG00000007737RUXF8593.243ENSAMEG00000002166-10091.765Ailuropoda_melanoleuca
ENSELUG00000007737RUXF8495.890ENSACIG00000013216snrpf9994.048Amphilophus_citrinellus
ENSELUG00000007737RUXF8495.890ENSAOCG00000015108snrpf9994.048Amphiprion_ocellaris
ENSELUG00000007737RUXF8495.890ENSAPEG00000022022snrpf9994.048Amphiprion_percula
ENSELUG00000007737RUXF8495.890ENSATEG00000022625snrpf9589.773Anabas_testudineus
ENSELUG00000007737RUXF8591.892ENSACAG00000014073SNRPF9890.588Anolis_carolinensis
ENSELUG00000007737RUXF8693.333ENSANAG00000032845SNRPF10091.860Aotus_nancymaae
ENSELUG00000007737RUXF8665.333ENSANAG00000025860-10066.279Aotus_nancymaae
ENSELUG00000007737RUXF8287.324ENSANAG00000020297-9174.000Aotus_nancymaae
ENSELUG00000007737RUXF8495.890ENSACLG00000016066snrpf9994.048Astatotilapia_calliptera
ENSELUG00000007737RUXF8696.000ENSAMXG00000007421snrpf10094.186Astyanax_mexicanus
ENSELUG00000007737RUXF8693.333ENSBTAG00000016271SNRPF10091.860Bos_taurus
ENSELUG00000007737RUXF9088.462ENSBTAG00000050012-9388.000Bos_taurus
ENSELUG00000007737RUXF8970.130WBGene00004918snr-58868.750Caenorhabditis_elegans
ENSELUG00000007737RUXF8693.333ENSCJAG00000002705-10091.860Callithrix_jacchus
ENSELUG00000007737RUXF8693.333ENSCAFG00000006395-7791.860Canis_familiaris
ENSELUG00000007737RUXF8484.932ENSCAFG00000031151-9886.905Canis_familiaris
ENSELUG00000007737RUXF8484.932ENSCAFG00020010823-9886.905Canis_lupus_dingo
ENSELUG00000007737RUXF9082.051ENSCAFG00020013161-7490.000Canis_lupus_dingo
ENSELUG00000007737RUXF8680.000ENSTSYG00000030635-10080.233Carlito_syrichta
ENSELUG00000007737RUXF9387.654ENSTSYG00000031636-6887.654Carlito_syrichta
ENSELUG00000007737RUXF8688.158ENSTSYG00000036502-10087.356Carlito_syrichta
ENSELUG00000007737RUXF8593.243ENSCAPG00000007242SNRPF10091.765Cavia_aperea
ENSELUG00000007737RUXF8693.333ENSCPOG00000013898SNRPF10091.860Cavia_porcellus
ENSELUG00000007737RUXF8493.151ENSCCAG00000017356-10090.698Cebus_capucinus
ENSELUG00000007737RUXF8693.333ENSCCAG00000037378-10091.860Cebus_capucinus
ENSELUG00000007737RUXF9980.233ENSCCAG00000033627-8567.593Cebus_capucinus
ENSELUG00000007737RUXF8693.333ENSCLAG00000007200SNRPF10091.860Chinchilla_lanigera
ENSELUG00000007737RUXF8693.333ENSCSAG00000003602-7586.957Chlorocebus_sabaeus
ENSELUG00000007737RUXF7493.750ENSCHOG00000009392SNRPF10093.750Choloepus_hoffmanni
ENSELUG00000007737RUXF9981.395ENSCPBG00000001985-10081.395Chrysemys_picta_bellii
ENSELUG00000007737RUXF9984.884ENSCPBG00000026463-10084.884Chrysemys_picta_bellii
ENSELUG00000007737RUXF9885.882ENSCPBG00000024287-6886.047Chrysemys_picta_bellii
ENSELUG00000007737RUXF8685.333ENSCPBG00000006227-10083.721Chrysemys_picta_bellii
ENSELUG00000007737RUXF9883.529ENSCSAVG00000007498-9882.558Ciona_savignyi
ENSELUG00000007737RUXF8688.000ENSCGRG00001008965-6787.209Cricetulus_griseus_chok1gshd
ENSELUG00000007737RUXF8693.333ENSCGRG00001017100-10091.860Cricetulus_griseus_chok1gshd
ENSELUG00000007737RUXF8693.333ENSCGRG00000000336-10091.860Cricetulus_griseus_crigri
ENSELUG00000007737RUXF9288.750ENSCGRG00000018878-9488.000Cricetulus_griseus_crigri
ENSELUG00000007737RUXF8694.667ENSCSEG00000004748snrpf10093.023Cynoglossus_semilaevis
ENSELUG00000007737RUXF8595.946ENSCVAG00000000397snrpf7983.838Cyprinodon_variegatus
ENSELUG00000007737RUXF8693.506ENSDARG00000105037snrpf10092.045Danio_rerio
ENSELUG00000007737RUXF8693.333ENSDNOG00000043775-5591.860Dasypus_novemcinctus
ENSELUG00000007737RUXF8692.000ENSDNOG00000048989-7790.698Dasypus_novemcinctus
ENSELUG00000007737RUXF8677.333ENSDNOG00000049373-7575.581Dasypus_novemcinctus
ENSELUG00000007737RUXF6889.831ENSDORG00000029740-8588.571Dipodomys_ordii
ENSELUG00000007737RUXF8384.722ENSDORG00000025351-10084.722Dipodomys_ordii
ENSELUG00000007737RUXF9773.810FBgn0000426SmF9772.941Drosophila_melanogaster
ENSELUG00000007737RUXF8693.333ENSETEG00000001558-10091.860Echinops_telfairi
ENSELUG00000007737RUXF9574.699ENSEBUG00000001793-7286.567Eptatretus_burgeri
ENSELUG00000007737RUXF8693.333ENSECAG00000019817SNRPF7091.860Equus_caballus
ENSELUG00000007737RUXF8593.243ENSEEUG00000013509SNRPF10091.765Erinaceus_europaeus
ENSELUG00000007737RUXF9773.810ENSFCAG00000031148-9861.682Felis_catus
ENSELUG00000007737RUXF8670.667ENSFCAG00000021942-10072.093Felis_catus
ENSELUG00000007737RUXF8693.333ENSFCAG00000029966-10091.860Felis_catus
ENSELUG00000007737RUXF8593.243ENSFALG00000010799SNRPF9991.765Ficedula_albicollis
ENSELUG00000007737RUXF8693.333ENSFDAG00000002831-10091.860Fukomys_damarensis
ENSELUG00000007737RUXF8595.946ENSFHEG00000003240snrpf8584.694Fundulus_heteroclitus
ENSELUG00000007737RUXF8595.946ENSGMOG00000007741snrpf10094.118Gadus_morhua
ENSELUG00000007737RUXF8693.333ENSGALG00000011409SNRPF10091.860Gallus_gallus
ENSELUG00000007737RUXF8495.890ENSGAFG00000016187snrpf9794.048Gambusia_affinis
ENSELUG00000007737RUXF8597.297ENSGACG00000020055snrpf10095.294Gasterosteus_aculeatus
ENSELUG00000007737RUXF7981.159ENSGAGG00000014132-8381.159Gopherus_agassizii
ENSELUG00000007737RUXF6980.000ENSGAGG00000011163-10080.000Gopherus_agassizii
ENSELUG00000007737RUXF7490.625ENSGAGG00000020974-5490.625Gopherus_agassizii
ENSELUG00000007737RUXF8586.486ENSGAGG00000012945-7786.047Gopherus_agassizii
ENSELUG00000007737RUXF9183.544ENSGAGG00000022991-8983.544Gopherus_agassizii
ENSELUG00000007737RUXF9170.886ENSGGOG00000039564-9069.333Gorilla_gorilla
ENSELUG00000007737RUXF8693.333ENSGGOG00000001127-10091.860Gorilla_gorilla
ENSELUG00000007737RUXF9775.000ENSGGOG00000039936-9575.000Gorilla_gorilla
ENSELUG00000007737RUXF8693.333ENSHGLG00000009108SNRPF10091.860Heterocephalus_glaber_female
ENSELUG00000007737RUXF8692.000ENSHGLG00000021172-10090.698Heterocephalus_glaber_female
ENSELUG00000007737RUXF8593.243ENSHGLG00100008103-10091.765Heterocephalus_glaber_male
ENSELUG00000007737RUXF8692.000ENSHGLG00100019596-10090.698Heterocephalus_glaber_male
ENSELUG00000007737RUXF7285.714ENSHCOG00000018663snrpf5585.714Hippocampus_comes
ENSELUG00000007737RUXF8696.000ENSIPUG00000018994snrpf10094.186Ictalurus_punctatus
ENSELUG00000007737RUXF8693.333ENSSTOG00000010434-10091.860Ictidomys_tridecemlineatus
ENSELUG00000007737RUXF9976.744ENSJJAG00000010502-10076.744Jaculus_jaculus
ENSELUG00000007737RUXF8693.333ENSJJAG00000011272-10091.860Jaculus_jaculus
ENSELUG00000007737RUXF7783.582ENSJJAG00000004828-10083.582Jaculus_jaculus
ENSELUG00000007737RUXF9975.581ENSJJAG00000004558-10075.581Jaculus_jaculus
ENSELUG00000007737RUXF8694.667ENSKMAG00000013566snrpf10093.023Kryptolebias_marmoratus
ENSELUG00000007737RUXF8694.667ENSLBEG00000008800snrpf10093.023Labrus_bergylta
ENSELUG00000007737RUXF8692.000ENSLACG00000002456-7391.765Latimeria_chalumnae
ENSELUG00000007737RUXF8696.000ENSLOCG00000015744snrpf10094.186Lepisosteus_oculatus
ENSELUG00000007737RUXF8593.243ENSLAFG00000017426SNRPF9991.765Loxodonta_africana
ENSELUG00000007737RUXF8494.521ENSMAMG00000016593snrpf9992.857Mastacembelus_armatus
ENSELUG00000007737RUXF8495.890ENSMZEG00005014701snrpf9994.048Maylandia_zebra
ENSELUG00000007737RUXF8493.151ENSMGAG00000011453-7691.667Meleagris_gallopavo
ENSELUG00000007737RUXF9568.675ENSMAUG00000010289-9668.675Mesocricetus_auratus
ENSELUG00000007737RUXF7292.063ENSMAUG00000016909-10090.541Mesocricetus_auratus
ENSELUG00000007737RUXF8689.333ENSMAUG00000008799-10088.372Mesocricetus_auratus
ENSELUG00000007737RUXF7292.063ENSMAUG00000019737-10090.541Mesocricetus_auratus
ENSELUG00000007737RUXF8686.667ENSMICG00000030494-9368.966Microcebus_murinus
ENSELUG00000007737RUXF8693.333ENSMICG00000012153-10091.860Microcebus_murinus
ENSELUG00000007737RUXF8680.000ENSMOCG00000022166-9477.011Microtus_ochrogaster
ENSELUG00000007737RUXF7876.471ENSMOCG00000020220-10075.949Microtus_ochrogaster
ENSELUG00000007737RUXF8693.333ENSMOCG00000020437Snrpf10091.860Microtus_ochrogaster
ENSELUG00000007737RUXF8594.595ENSMMOG00000007127snrpf10092.941Mola_mola
ENSELUG00000007737RUXF8693.333ENSMODG00000008091SNRPF8087.912Monodelphis_domestica
ENSELUG00000007737RUXF8495.890ENSMALG00000012328snrpf9994.048Monopterus_albus
ENSELUG00000007737RUXF8693.333MGP_CAROLIEiJ_G0015735-10091.860Mus_caroli
ENSELUG00000007737RUXF8693.333ENSMUSG00000020018Snrpf10091.860Mus_musculus
ENSELUG00000007737RUXF8693.333MGP_PahariEiJ_G0031350Snrpf10091.860Mus_pahari
ENSELUG00000007737RUXF8693.333MGP_SPRETEiJ_G0016553Snrpf10091.860Mus_spretus
ENSELUG00000007737RUXF8693.333ENSMPUG00000007176-7791.860Mustela_putorius_furo
ENSELUG00000007737RUXF8693.333ENSMLUG00000026149-8191.860Myotis_lucifugus
ENSELUG00000007737RUXF8693.333ENSMLUG00000029201-8191.860Myotis_lucifugus
ENSELUG00000007737RUXF8693.333ENSMLUG00000027932-8191.860Myotis_lucifugus
ENSELUG00000007737RUXF9874.118ENSMLUG00000026269-8074.118Myotis_lucifugus
ENSELUG00000007737RUXF8593.243ENSMLUG00000013577-10091.765Myotis_lucifugus
ENSELUG00000007737RUXF7285.714ENSNGAG00000005851-7185.000Nannospalax_galili
ENSELUG00000007737RUXF8693.333ENSNGAG00000024292-10091.860Nannospalax_galili
ENSELUG00000007737RUXF8595.946ENSNBRG00000011682snrpf8794.118Neolamprologus_brichardi
ENSELUG00000007737RUXF8567.568ENSMEUG00000000671SNRPF10069.412Notamacropus_eugenii
ENSELUG00000007737RUXF8693.333ENSODEG00000010328-10091.860Octodon_degus
ENSELUG00000007737RUXF8692.000ENSOCUG00000010925SNRPF8683.505Oryctolagus_cuniculus
ENSELUG00000007737RUXF8595.946ENSORLG00020008216snrpf10094.118Oryzias_latipes_hni
ENSELUG00000007737RUXF8595.946ENSORLG00015007418snrpf10094.118Oryzias_latipes_hsok
ENSELUG00000007737RUXF8497.260ENSOMEG00000003018snrpf9995.238Oryzias_melastigma
ENSELUG00000007737RUXF8692.000ENSOGAG00000030323-10091.860Otolemur_garnettii
ENSELUG00000007737RUXF8693.333ENSOARG00000011853-7591.860Ovis_aries
ENSELUG00000007737RUXF9170.886ENSPPAG00000037479-9169.333Pan_paniscus
ENSELUG00000007737RUXF9775.000ENSPPAG00000037544-9575.000Pan_paniscus
ENSELUG00000007737RUXF8693.333ENSPPRG00000005875-10091.860Panthera_pardus
ENSELUG00000007737RUXF9772.619ENSPPRG00000007449-8672.619Panthera_pardus
ENSELUG00000007737RUXF9775.000ENSPTIG00000005117-10075.000Panthera_tigris_altaica
ENSELUG00000007737RUXF8693.333ENSPTIG00000007520SNRPF10091.860Panthera_tigris_altaica
ENSELUG00000007737RUXF9170.886ENSPTRG00000047717-9169.333Pan_troglodytes
ENSELUG00000007737RUXF9775.000ENSPTRG00000043814-9575.000Pan_troglodytes
ENSELUG00000007737RUXF8595.946ENSPKIG00000014784snrpf9394.118Paramormyrops_kingsleyae
ENSELUG00000007737RUXF8593.243ENSPSIG00000016462SNRPF9991.765Pelodiscus_sinensis
ENSELUG00000007737RUXF8594.595ENSPMGG00000023548snrpf10092.941Periophthalmus_magnuspinnatus
ENSELUG00000007737RUXF8693.333ENSPEMG00000023326Snrpf10091.860Peromyscus_maniculatus_bairdii
ENSELUG00000007737RUXF8495.890ENSPLAG00000023932snrpf9994.048Poecilia_latipinna
ENSELUG00000007737RUXF8495.890ENSPMEG00000003377snrpf9994.048Poecilia_mexicana
ENSELUG00000007737RUXF8495.890ENSPREG00000022635snrpf9794.048Poecilia_reticulata
ENSELUG00000007737RUXF8693.333ENSPPYG00000004847-10091.860Pongo_abelii
ENSELUG00000007737RUXF8693.333ENSPCOG00000023833-10091.860Propithecus_coquereli
ENSELUG00000007737RUXF8693.333ENSPVAG00000009036SNRPF10091.860Pteropus_vampyrus
ENSELUG00000007737RUXF8495.890ENSPNYG00000021712snrpf9994.048Pundamilia_nyererei
ENSELUG00000007737RUXF8497.260ENSPNAG00000019117snrpf9995.238Pygocentrus_nattereri
ENSELUG00000007737RUXF8693.333ENSRNOG00000005556Snrpf10091.860Rattus_norvegicus
ENSELUG00000007737RUXF8690.667ENSRBIG00000030414-10088.372Rhinopithecus_bieti
ENSELUG00000007737RUXF8690.667ENSRROG00000021975-10088.372Rhinopithecus_roxellana
ENSELUG00000007737RUXF8057.746YPR182WSMX38357.746Saccharomyces_cerevisiae
ENSELUG00000007737RUXF8693.333ENSSBOG00000036179-10091.860Saimiri_boliviensis_boliviensis
ENSELUG00000007737RUXF8682.667ENSSBOG00000032297-10081.395Saimiri_boliviensis_boliviensis
ENSELUG00000007737RUXF9075.309ENSSBOG00000027638-10075.281Saimiri_boliviensis_boliviensis
ENSELUG00000007737RUXF8693.333ENSSBOG00000012868-10090.698Saimiri_boliviensis_boliviensis
ENSELUG00000007737RUXF8593.243ENSSHAG00000012294SNRPF8287.912Sarcophilus_harrisii
ENSELUG00000007737RUXF7496.875ENSSFOG00015021523snrpf9696.875Scleropages_formosus
ENSELUG00000007737RUXF8696.000ENSSMAG00000005533snrpf9895.294Scophthalmus_maximus
ENSELUG00000007737RUXF7596.923ENSSDUG00000016283snrpf7796.923Seriola_dumerili
ENSELUG00000007737RUXF8694.667ENSSLDG00000005119snrpf10093.023Seriola_lalandi_dorsalis
ENSELUG00000007737RUXF9270.000ENSSLDG00000003885-9172.000Seriola_lalandi_dorsalis
ENSELUG00000007737RUXF8493.151ENSSPUG00000014590-9991.667Sphenodon_punctatus
ENSELUG00000007737RUXF8595.946ENSSPAG00000003283snrpf9794.118Stegastes_partitus
ENSELUG00000007737RUXF8693.333ENSSSCG00000000895SNRPF10091.860Sus_scrofa
ENSELUG00000007737RUXF6793.103ENSTRUG00000014956snrpf10091.304Takifugu_rubripes
ENSELUG00000007737RUXF8694.667ENSTNIG00000012672snrpf10093.023Tetraodon_nigroviridis
ENSELUG00000007737RUXF8668.000ENSTTRG00000006070SNRPF10069.767Tursiops_truncatus
ENSELUG00000007737RUXF9881.176ENSUAMG00000001101-9980.000Ursus_americanus
ENSELUG00000007737RUXF8693.333ENSUAMG00000008176-10091.860Ursus_americanus
ENSELUG00000007737RUXF8682.667ENSUMAG00000006177-9981.176Ursus_maritimus
ENSELUG00000007737RUXF8693.333ENSUMAG00000003528-10091.860Ursus_maritimus
ENSELUG00000007737RUXF8693.333ENSVPAG00000008712-10091.860Vicugna_pacos
ENSELUG00000007737RUXF9085.897ENSVVUG00000023821-9685.333Vulpes_vulpes
ENSELUG00000007737RUXF8572.368ENSXETG00000021630snrpf10073.563Xenopus_tropicalis
ENSELUG00000007737RUXF8495.890ENSXCOG00000013860snrpf9794.048Xiphophorus_couchianus
ENSELUG00000007737RUXF8495.890ENSXMAG00000015448snrpf9994.048Xiphophorus_maculatus

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