EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000007917 (Gene tree)
Gene ID: 105025985
Gene Symbol: ercc6l
Alias: si:ch211-278b8.3
Full Name: ERCC excision repair 6 like%2C spindle assembly checkpoint helicase
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 15992 bases
Position: chrLG07:17158047-17174038
Accession: 105025985
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000007084	ResIII	PF04851.15	4.8e-11	1	1
ENSELUP00000007095	ResIII	PF04851.15	5.2e-11	1	1
ENSELUP00000030617	ResIII	PF04851.15	3.7e-10	1	1
ENSELUP00000007095	DEAD	PF00270.29	2e-07	1	1
ENSELUP00000007084	DEAD	PF00270.29	2.1e-07	1	1
ENSELUP00000030617	DEAD	PF00270.29	5.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000007854	-	3255	-	ENSELUP00000030617	1084 (aa)	-	-
ENSELUT00000007846	-	3612	-	ENSELUP00000007084	1203 (aa)	-	-
ENSELUT00000007809	-	5077	XM_010897109	ENSELUP00000007095	1302 (aa)	XP_010895411	UPI00057807F6

Gene Model

Click here to download ENSELUG00000007917's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000007917's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000007917	ercc6l	50	30.481	ENSELUG00000002295	rad54l	73	30.964

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000007917	ercc6l	99	47.494	ENSG00000186871	ERCC6L	83	66.303	Homo_sapiens
ENSELUG00000007917	ercc6l	57	71.345	ENSAPOG00000011392	ercc6l	99	71.345	Acanthochromis_polyacanthus
ENSELUG00000007917	ercc6l	87	65.800	ENSAMEG00000005804	ERCC6L	81	65.844	Ailuropoda_melanoleuca
ENSELUG00000007917	ercc6l	97	58.663	ENSAOCG00000016285	-	98	56.778	Amphiprion_ocellaris
ENSELUG00000007917	ercc6l	99	56.382	ENSAOCG00000016323	ercc6l	99	56.528	Amphiprion_ocellaris
ENSELUG00000007917	ercc6l	97	59.068	ENSAPEG00000022533	ERCC6L	94	72.648	Amphiprion_percula
ENSELUG00000007917	ercc6l	99	56.718	ENSAPEG00000022499	ercc6l	97	58.633	Amphiprion_percula
ENSELUG00000007917	ercc6l	99	59.688	ENSATEG00000012969	ercc6l	99	63.916	Anabas_testudineus
ENSELUG00000007917	ercc6l	92	51.859	ENSACAG00000001226	-	99	51.244	Anolis_carolinensis
ENSELUG00000007917	ercc6l	56	67.327	ENSACAG00000028866	-	95	63.845	Anolis_carolinensis
ENSELUG00000007917	ercc6l	56	67.327	ENSACAG00000029354	-	98	63.937	Anolis_carolinensis
ENSELUG00000007917	ercc6l	100	56.057	ENSACLG00000006555	ercc6l	99	56.499	Astatotilapia_calliptera
ENSELUG00000007917	ercc6l	79	73.418	ENSAMXG00000004780	ercc6l	85	73.418	Astyanax_mexicanus
ENSELUG00000007917	ercc6l	99	47.908	ENSBTAG00000005607	ERCC6L	87	62.516	Bos_taurus
ENSELUG00000007917	ercc6l	99	47.184	ENSCJAG00000022332	ERCC6L	99	46.687	Callithrix_jacchus
ENSELUG00000007917	ercc6l	99	47.917	ENSCAFG00000023690	ERCC6L	98	46.205	Canis_familiaris
ENSELUG00000007917	ercc6l	99	47.315	ENSCAFG00020021313	ERCC6L	99	47.651	Canis_lupus_dingo
ENSELUG00000007917	ercc6l	81	63.874	ENSCHIG00000009967	ERCC6L	75	63.874	Capra_hircus
ENSELUG00000007917	ercc6l	99	47.284	ENSTSYG00000013701	ERCC6L	81	65.390	Carlito_syrichta
ENSELUG00000007917	ercc6l	99	46.404	ENSCPOG00000011407	ERCC6L	98	46.899	Cavia_porcellus
ENSELUG00000007917	ercc6l	99	47.623	ENSCCAG00000023790	ERCC6L	98	47.384	Cebus_capucinus
ENSELUG00000007917	ercc6l	99	47.558	ENSCATG00000038031	ERCC6L	98	46.957	Cercocebus_atys
ENSELUG00000007917	ercc6l	99	45.992	ENSCLAG00000015218	-	99	45.468	Chinchilla_lanigera
ENSELUG00000007917	ercc6l	78	64.286	ENSCLAG00000017785	-	81	64.286	Chinchilla_lanigera
ENSELUG00000007917	ercc6l	99	47.656	ENSCSAG00000011173	ERCC6L	98	47.149	Chlorocebus_sabaeus
ENSELUG00000007917	ercc6l	96	63.758	ENSCPBG00000011965	ERCC6L	82	71.869	Chrysemys_picta_bellii
ENSELUG00000007917	ercc6l	83	65.991	ENSCANG00000016909	ERCC6L	74	65.991	Colobus_angolensis_palliatus
ENSELUG00000007917	ercc6l	87	64.609	ENSCGRG00001016668	Ercc6l	86	64.609	Cricetulus_griseus_chok1gshd
ENSELUG00000007917	ercc6l	87	64.609	ENSCGRG00000006223	Ercc6l	86	64.609	Cricetulus_griseus_crigri
ENSELUG00000007917	ercc6l	99	56.038	ENSCSEG00000010268	ercc6l	99	56.867	Cynoglossus_semilaevis
ENSELUG00000007917	ercc6l	58	68.383	ENSCVAG00000008090	ercc6l	97	68.383	Cyprinodon_variegatus
ENSELUG00000007917	ercc6l	92	71.756	ENSDARG00000002479	ercc6l	88	69.448	Danio_rerio
ENSELUG00000007917	ercc6l	87	63.663	ENSDNOG00000032356	ERCC6L	86	62.043	Dasypus_novemcinctus
ENSELUG00000007917	ercc6l	99	46.540	ENSDORG00000007865	Ercc6l	98	46.545	Dipodomys_ordii
ENSELUG00000007917	ercc6l	64	67.742	ENSETEG00000018007	ERCC6L	66	67.742	Echinops_telfairi
ENSELUG00000007917	ercc6l	81	67.093	ENSEASG00005007025	ERCC6L	81	67.093	Equus_asinus_asinus
ENSELUG00000007917	ercc6l	82	67.412	ENSECAG00000002513	ERCC6L	82	64.286	Equus_caballus
ENSELUG00000007917	ercc6l	78	64.902	ENSEEUG00000015724	ERCC6L	76	64.902	Erinaceus_europaeus
ENSELUG00000007917	ercc6l	87	65.116	ENSFCAG00000012038	ERCC6L	82	65.116	Felis_catus
ENSELUG00000007917	ercc6l	98	49.027	ENSFALG00000011797	ERCC6L	100	49.534	Ficedula_albicollis
ENSELUG00000007917	ercc6l	99	47.229	ENSFDAG00000019713	ERCC6L	98	47.385	Fukomys_damarensis
ENSELUG00000007917	ercc6l	55	68.237	ENSFHEG00000007269	-	94	68.237	Fundulus_heteroclitus
ENSELUG00000007917	ercc6l	99	55.321	ENSFHEG00000007205	ercc6l	99	53.828	Fundulus_heteroclitus
ENSELUG00000007917	ercc6l	93	63.648	ENSGALG00000003881	ERCC6L	88	63.648	Gallus_gallus
ENSELUG00000007917	ercc6l	99	49.240	ENSGAGG00000018784	ERCC6L	100	50.511	Gopherus_agassizii
ENSELUG00000007917	ercc6l	99	47.607	ENSGGOG00000022367	ERCC6L	83	64.209	Gorilla_gorilla
ENSELUG00000007917	ercc6l	99	56.122	ENSHBUG00000007810	ercc6l	99	56.897	Haplochromis_burtoni
ENSELUG00000007917	ercc6l	99	47.077	ENSHGLG00000016594	ERCC6L	98	47.164	Heterocephalus_glaber_female
ENSELUG00000007917	ercc6l	99	47.077	ENSHGLG00100003339	ERCC6L	98	47.164	Heterocephalus_glaber_male
ENSELUG00000007917	ercc6l	85	66.950	ENSHCOG00000001051	ercc6l	98	52.838	Hippocampus_comes
ENSELUG00000007917	ercc6l	98	58.491	ENSIPUG00000016117	ercc6l	98	53.225	Ictalurus_punctatus
ENSELUG00000007917	ercc6l	99	47.517	ENSJJAG00000022875	Ercc6l	82	65.199	Jaculus_jaculus
ENSELUG00000007917	ercc6l	97	61.954	ENSKMAG00000011587	ercc6l	86	70.399	Kryptolebias_marmoratus
ENSELUG00000007917	ercc6l	80	72.005	ENSLBEG00000000091	ercc6l	91	71.646	Labrus_bergylta
ENSELUG00000007917	ercc6l	90	67.578	ENSLACG00000002634	ERCC6L	86	66.080	Latimeria_chalumnae
ENSELUG00000007917	ercc6l	99	55.692	ENSLOCG00000013925	ercc6l	99	56.021	Lepisosteus_oculatus
ENSELUG00000007917	ercc6l	99	46.807	ENSLAFG00000014985	ERCC6L	98	46.880	Loxodonta_africana
ENSELUG00000007917	ercc6l	99	47.652	ENSMFAG00000045509	ERCC6L	98	47.154	Macaca_fascicularis
ENSELUG00000007917	ercc6l	99	47.652	ENSMMUG00000012957	ERCC6L	99	47.472	Macaca_mulatta
ENSELUG00000007917	ercc6l	99	47.648	ENSMNEG00000030867	ERCC6L	98	47.154	Macaca_nemestrina
ENSELUG00000007917	ercc6l	83	66.303	ENSMLEG00000000190	ERCC6L	98	46.812	Mandrillus_leucophaeus
ENSELUG00000007917	ercc6l	98	69.394	ENSMAMG00000018595	ercc6l	91	69.740	Mastacembelus_armatus
ENSELUG00000007917	ercc6l	100	56.021	ENSMZEG00005001556	ercc6l	99	56.541	Maylandia_zebra
ENSELUG00000007917	ercc6l	99	49.053	ENSMGAG00000002094	ERCC6L	100	50.117	Meleagris_gallopavo
ENSELUG00000007917	ercc6l	90	64.876	ENSMAUG00000015560	Ercc6l	85	64.876	Mesocricetus_auratus
ENSELUG00000007917	ercc6l	86	64.698	ENSMICG00000035415	ERCC6L	78	64.698	Microcebus_murinus
ENSELUG00000007917	ercc6l	67	63.588	ENSMOCG00000021344	Ercc6l	86	63.588	Microtus_ochrogaster
ENSELUG00000007917	ercc6l	99	58.185	ENSMMOG00000020762	ercc6l	93	81.560	Mola_mola
ENSELUG00000007917	ercc6l	99	46.222	ENSMODG00000010916	ERCC6L	93	50.185	Monodelphis_domestica
ENSELUG00000007917	ercc6l	86	58.133	ENSMALG00000003561	-	85	54.319	Monopterus_albus
ENSELUG00000007917	ercc6l	99	55.319	ENSMALG00000003609	ercc6l	99	55.087	Monopterus_albus
ENSELUG00000007917	ercc6l	69	64.715	MGP_CAROLIEiJ_G0033297	Ercc6l	98	47.160	Mus_caroli
ENSELUG00000007917	ercc6l	70	66.134	ENSMUSG00000051220	Ercc6l	98	46.558	Mus_musculus
ENSELUG00000007917	ercc6l	81	63.395	MGP_PahariEiJ_G0031835	Ercc6l	83	63.395	Mus_pahari
ENSELUG00000007917	ercc6l	62	66.294	MGP_SPRETEiJ_G0034461	Ercc6l	98	46.334	Mus_spretus
ENSELUG00000007917	ercc6l	87	65.068	ENSMPUG00000005291	ERCC6L	98	47.513	Mustela_putorius_furo
ENSELUG00000007917	ercc6l	86	64.804	ENSMLUG00000011670	ERCC6L	88	62.712	Myotis_lucifugus
ENSELUG00000007917	ercc6l	77	65.537	ENSNGAG00000021063	Ercc6l	81	62.948	Nannospalax_galili
ENSELUG00000007917	ercc6l	99	47.830	ENSNLEG00000036284	ERCC6L	82	64.343	Nomascus_leucogenys
ENSELUG00000007917	ercc6l	99	46.603	ENSODEG00000002328	ERCC6L	99	46.603	Octodon_degus
ENSELUG00000007917	ercc6l	99	57.649	ENSONIG00000000589	ercc6l	99	57.878	Oreochromis_niloticus
ENSELUG00000007917	ercc6l	99	47.785	ENSOANG00000014708	ERCC6L	85	63.683	Ornithorhynchus_anatinus
ENSELUG00000007917	ercc6l	81	62.190	ENSOCUG00000008724	ERCC6L	77	60.174	Oryctolagus_cuniculus
ENSELUG00000007917	ercc6l	51	76.449	ENSORLG00000024240	ercc6l	95	76.449	Oryzias_latipes
ENSELUG00000007917	ercc6l	85	72.590	ENSORLG00020014999	ercc6l	97	54.591	Oryzias_latipes_hni
ENSELUG00000007917	ercc6l	83	72.549	ENSOMEG00000009481	ercc6l	86	72.549	Oryzias_melastigma
ENSELUG00000007917	ercc6l	74	65.432	ENSOGAG00000034301	-	82	65.432	Otolemur_garnettii
ENSELUG00000007917	ercc6l	74	65.116	ENSOGAG00000031470	-	81	65.116	Otolemur_garnettii
ENSELUG00000007917	ercc6l	99	47.504	ENSOARG00000005908	ERCC6L	99	46.340	Ovis_aries
ENSELUG00000007917	ercc6l	99	47.745	ENSPPAG00000031861	ERCC6L	82	64.477	Pan_paniscus
ENSELUG00000007917	ercc6l	87	64.810	ENSPPRG00000012408	ERCC6L	84	64.810	Panthera_pardus
ENSELUG00000007917	ercc6l	99	47.830	ENSPTRG00000022023	ERCC6L	98	46.901	Pan_troglodytes
ENSELUG00000007917	ercc6l	99	47.644	ENSPANG00000011598	ERCC6L	98	47.149	Papio_anubis
ENSELUG00000007917	ercc6l	91	79.178	ENSPKIG00000022325	ercc6l	83	79.041	Paramormyrops_kingsleyae
ENSELUG00000007917	ercc6l	99	50.866	ENSPSIG00000004789	ERCC6L	100	50.076	Pelodiscus_sinensis
ENSELUG00000007917	ercc6l	99	52.298	ENSPMGG00000023343	ercc6l	95	58.724	Periophthalmus_magnuspinnatus
ENSELUG00000007917	ercc6l	99	46.345	ENSPEMG00000007920	Ercc6l	98	46.501	Peromyscus_maniculatus_bairdii
ENSELUG00000007917	ercc6l	64	59.829	ENSPMAG00000005064	ercc6l	99	61.696	Petromyzon_marinus
ENSELUG00000007917	ercc6l	99	48.042	ENSPCIG00000026973	ERCC6L	95	48.361	Phascolarctos_cinereus
ENSELUG00000007917	ercc6l	88	72.006	ENSPFOG00000010410	ercc6l	95	69.915	Poecilia_formosa
ENSELUG00000007917	ercc6l	88	71.283	ENSPLAG00000005575	ercc6l	97	69.860	Poecilia_latipinna
ENSELUG00000007917	ercc6l	99	54.844	ENSPMEG00000016911	ercc6l	98	55.351	Poecilia_mexicana
ENSELUG00000007917	ercc6l	80	76.617	ENSPREG00000017617	ercc6l	88	74.566	Poecilia_reticulata
ENSELUG00000007917	ercc6l	99	47.785	ENSPPYG00000020461	ERCC6L	98	47.231	Pongo_abelii
ENSELUG00000007917	ercc6l	87	63.138	ENSPCOG00000024286	ERCC6L	73	64.201	Propithecus_coquereli
ENSELUG00000007917	ercc6l	87	64.198	ENSPVAG00000013596	ERCC6L	98	47.174	Pteropus_vampyrus
ENSELUG00000007917	ercc6l	93	72.215	ENSPNYG00000013185	ercc6l	96	72.215	Pundamilia_nyererei
ENSELUG00000007917	ercc6l	89	60.222	ENSPNAG00000006556	ercc6l	97	59.447	Pygocentrus_nattereri
ENSELUG00000007917	ercc6l	99	46.340	ENSRNOG00000003208	Ercc6l	81	64.674	Rattus_norvegicus
ENSELUG00000007917	ercc6l	99	47.755	ENSRBIG00000036588	ERCC6L	99	47.514	Rhinopithecus_bieti
ENSELUG00000007917	ercc6l	83	66.147	ENSRROG00000042561	ERCC6L	83	64.075	Rhinopithecus_roxellana
ENSELUG00000007917	ercc6l	78	65.337	ENSSBOG00000029416	ERCC6L	71	65.337	Saimiri_boliviensis_boliviensis
ENSELUG00000007917	ercc6l	99	45.801	ENSSHAG00000012578	-	98	44.763	Sarcophilus_harrisii
ENSELUG00000007917	ercc6l	77	56.198	ENSSHAG00000001331	-	99	51.035	Sarcophilus_harrisii
ENSELUG00000007917	ercc6l	57	41.951	ENSSFOG00015014557	-	52	42.879	Scleropages_formosus
ENSELUG00000007917	ercc6l	87	77.705	ENSSFOG00015009709	ercc6l	97	62.557	Scleropages_formosus
ENSELUG00000007917	ercc6l	94	71.895	ENSSDUG00000013307	ercc6l	99	72.739	Seriola_dumerili
ENSELUG00000007917	ercc6l	93	60.588	ENSSLDG00000014910	ercc6l	99	73.253	Seriola_lalandi_dorsalis
ENSELUG00000007917	ercc6l	93	49.715	ENSSPUG00000005866	ERCC6L	94	50.955	Sphenodon_punctatus
ENSELUG00000007917	ercc6l	95	66.667	ENSSPAG00000018472	ercc6l	99	57.329	Stegastes_partitus
ENSELUG00000007917	ercc6l	99	47.913	ENSSSCG00000021834	ERCC6L	98	47.913	Sus_scrofa
ENSELUG00000007917	ercc6l	99	58.300	ENSTRUG00000012053	ercc6l	99	57.270	Takifugu_rubripes
ENSELUG00000007917	ercc6l	70	67.520	ENSTTRG00000010777	ERCC6L	82	64.642	Tursiops_truncatus
ENSELUG00000007917	ercc6l	78	68.102	ENSUAMG00000015605	ERCC6L	87	63.781	Ursus_americanus
ENSELUG00000007917	ercc6l	87	63.741	ENSUMAG00000004863	ERCC6L	87	63.781	Ursus_maritimus
ENSELUG00000007917	ercc6l	99	47.717	ENSVPAG00000010950	ERCC6L	99	46.957	Vicugna_pacos
ENSELUG00000007917	ercc6l	89	63.117	ENSVVUG00000025512	ERCC6L	84	62.452	Vulpes_vulpes
ENSELUG00000007917	ercc6l	99	50.566	ENSXETG00000022574	ercc6l	99	49.733	Xenopus_tropicalis
ENSELUG00000007917	ercc6l	56	73.588	ENSXCOG00000011494	ercc6l	90	73.635	Xiphophorus_couchianus
ENSELUG00000007917	ercc6l	97	71.620	ENSXMAG00000000948	ercc6l	99	71.620	Xiphophorus_maculatus