EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000007990 (Gene tree)
Gene ID: 105031228
Gene Symbol: fubp1
Alias: wu:fa92h11|wu:fb24h11|wu:fc26f06|zgc:66046
Full Name: far upstream element binding protein 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 15669 bases
Position: chrLG03:1945769-1961437
Accession: 105031228
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000007191	KH_1	PF00013.29	1.3e-67	1	4
ENSELUP00000007191	KH_1	PF00013.29	1.3e-67	2	4
ENSELUP00000007191	KH_1	PF00013.29	1.3e-67	3	4
ENSELUP00000007191	KH_1	PF00013.29	1.3e-67	4	4
ENSELUP00000007201	KH_1	PF00013.29	1.6e-67	1	4
ENSELUP00000007201	KH_1	PF00013.29	1.6e-67	2	4
ENSELUP00000007201	KH_1	PF00013.29	1.6e-67	3	4
ENSELUP00000007201	KH_1	PF00013.29	1.6e-67	4	4
ENSELUP00000007191	KH_2	PF07650.17	6e-20	1	2
ENSELUP00000007191	KH_2	PF07650.17	6e-20	2	2
ENSELUP00000007201	KH_2	PF07650.17	7.2e-20	1	2
ENSELUP00000007201	KH_2	PF07650.17	7.2e-20	2	2
ENSELUP00000007201	DUF1897	PF09005.10	6.6e-13	1	2
ENSELUP00000007201	DUF1897	PF09005.10	6.6e-13	2	2
ENSELUP00000007191	DUF1897	PF09005.10	4.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000007671	-	6633	XM_010905545	ENSELUP00000007191	637 (aa)	XP_010903847	UPI0005775FCA
ENSELUT00000007648	-	6708	XM_020045377	ENSELUP00000007201	662 (aa)	XP_019900936	UPI0009732565

Gene Model

Click here to download ENSELUG00000007990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000007990's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000007990	fubp1	95	53.846	ENSELUG00000009949	-	75	58.621
ENSELUG00000007990	fubp1	95	61.905	ENSELUG00000013808	fubp3	84	59.447
ENSELUG00000007990	fubp1	72	60.000	ENSELUG00000016310	khsrp	99	52.782
ENSELUG00000007990	fubp1	53	36.782	ENSELUG00000018204	pcbp4	54	38.158
ENSELUG00000007990	fubp1	55	39.706	ENSELUG00000019784	zgc:110045	76	39.706
ENSELUG00000007990	fubp1	51	38.462	ENSELUG00000001560	-	80	38.462
ENSELUG00000007990	fubp1	53	35.616	ENSELUG00000003521	pcbp3	59	37.879
ENSELUG00000007990	fubp1	97	53.392	ENSELUG00000008445	-	85	75.000
ENSELUG00000007990	fubp1	61	45.205	ENSELUG00000010754	PCBP2	65	43.939
ENSELUG00000007990	fubp1	58	33.010	ENSELUG00000001870	-	50	40.625
ENSELUG00000007990	fubp1	61	41.096	ENSELUG00000014427	pcbp2	88	44.444
ENSELUG00000007990	fubp1	52	30.508	ENSELUG00000014974	igf2bp1	50	30.286

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000007990	fubp1	70	74.892	ENSG00000162613	FUBP1	100	68.835	Homo_sapiens
ENSELUG00000007990	fubp1	99	80.930	ENSAPOG00000014845	fubp1	98	80.451	Acanthochromis_polyacanthus
ENSELUG00000007990	fubp1	70	70.782	ENSAMEG00000007372	FUBP1	100	66.374	Ailuropoda_melanoleuca
ENSELUG00000007990	fubp1	100	79.658	ENSACIG00000020024	fubp1	100	78.106	Amphilophus_citrinellus
ENSELUG00000007990	fubp1	100	83.151	ENSAPEG00000012232	fubp1	100	82.059	Amphiprion_percula
ENSELUG00000007990	fubp1	100	85.564	ENSATEG00000018619	fubp1	100	85.000	Anabas_testudineus
ENSELUG00000007990	fubp1	87	76.303	ENSAPLG00000005965	FUBP1	100	70.065	Anas_platyrhynchos
ENSELUG00000007990	fubp1	70	71.369	ENSACAG00000006310	FUBP1	96	68.103	Anolis_carolinensis
ENSELUG00000007990	fubp1	100	85.865	ENSACLG00000006708	fubp1	100	85.714	Astatotilapia_calliptera
ENSELUG00000007990	fubp1	87	84.871	ENSAMXG00000005525	fubp1	99	83.764	Astyanax_mexicanus
ENSELUG00000007990	fubp1	70	74.675	ENSCJAG00000007062	FUBP1	100	68.939	Callithrix_jacchus
ENSELUG00000007990	fubp1	70	74.298	ENSCAFG00000020361	FUBP1	100	68.684	Canis_familiaris
ENSELUG00000007990	fubp1	66	75.650	ENSTSYG00000000148	FUBP1	100	68.277	Carlito_syrichta
ENSELUG00000007990	fubp1	59	75.000	ENSCAPG00000011052	-	67	75.357	Cavia_aperea
ENSELUG00000007990	fubp1	70	74.298	ENSCPOG00000002757	FUBP1	98	76.871	Cavia_porcellus
ENSELUG00000007990	fubp1	91	60.714	ENSCCAG00000036537	FUBP1	100	60.907	Cebus_capucinus
ENSELUG00000007990	fubp1	70	74.514	ENSCATG00000042126	FUBP1	100	68.835	Cercocebus_atys
ENSELUG00000007990	fubp1	70	74.298	ENSCLAG00000005621	FUBP1	100	77.707	Chinchilla_lanigera
ENSELUG00000007990	fubp1	70	74.514	ENSCSAG00000001402	FUBP1	100	68.835	Chlorocebus_sabaeus
ENSELUG00000007990	fubp1	70	74.082	ENSCHOG00000008177	FUBP1	98	70.410	Choloepus_hoffmanni
ENSELUG00000007990	fubp1	70	75.930	ENSCGRG00001007103	Fubp1	100	68.541	Cricetulus_griseus_chok1gshd
ENSELUG00000007990	fubp1	66	76.123	ENSCGRG00000003372	Fubp1	98	77.551	Cricetulus_griseus_crigri
ENSELUG00000007990	fubp1	100	83.594	ENSCSEG00000021412	fubp1	98	82.969	Cynoglossus_semilaevis
ENSELUG00000007990	fubp1	99	85.068	ENSCVAG00000014487	fubp1	99	84.615	Cyprinodon_variegatus
ENSELUG00000007990	fubp1	100	80.740	ENSDARG00000029248	fubp1	100	83.667	Danio_rerio
ENSELUG00000007990	fubp1	83	55.952	ENSDNOG00000034565	-	86	45.733	Dasypus_novemcinctus
ENSELUG00000007990	fubp1	70	74.514	ENSDORG00000016534	Fubp1	98	70.909	Dipodomys_ordii
ENSELUG00000007990	fubp1	77	75.072	ENSETEG00000000948	-	58	75.676	Echinops_telfairi
ENSELUG00000007990	fubp1	63	71.667	ENSEBUG00000016143	fubp1	62	71.930	Eptatretus_burgeri
ENSELUG00000007990	fubp1	73	80.556	ENSEEUG00000001287	FUBP1	87	66.935	Erinaceus_europaeus
ENSELUG00000007990	fubp1	92	74.783	ENSFALG00000005768	FUBP1	97	69.207	Ficedula_albicollis
ENSELUG00000007990	fubp1	70	74.082	ENSFDAG00000014210	FUBP1	100	76.190	Fukomys_damarensis
ENSELUG00000007990	fubp1	100	84.962	ENSFHEG00000005230	fubp1	100	84.688	Fundulus_heteroclitus
ENSELUG00000007990	fubp1	100	80.805	ENSGMOG00000003370	fubp1	100	81.115	Gadus_morhua
ENSELUG00000007990	fubp1	92	75.435	ENSGALG00000008939	FUBP1	100	69.909	Gallus_gallus
ENSELUG00000007990	fubp1	100	83.728	ENSGAFG00000020972	fubp1	100	83.410	Gambusia_affinis
ENSELUG00000007990	fubp1	100	82.212	ENSGACG00000016563	fubp1	100	82.362	Gasterosteus_aculeatus
ENSELUG00000007990	fubp1	100	85.263	ENSHBUG00000009835	fubp1	100	84.361	Haplochromis_burtoni
ENSELUG00000007990	fubp1	72	69.723	ENSHGLG00000002808	-	100	63.382	Heterocephalus_glaber_female
ENSELUG00000007990	fubp1	70	74.298	ENSHGLG00000008415	-	100	77.707	Heterocephalus_glaber_female
ENSELUG00000007990	fubp1	70	74.298	ENSHGLG00100003417	-	100	67.421	Heterocephalus_glaber_male
ENSELUG00000007990	fubp1	72	70.576	ENSHGLG00100001414	-	100	63.971	Heterocephalus_glaber_male
ENSELUG00000007990	fubp1	100	83.604	ENSHCOG00000000910	fubp1	100	83.282	Hippocampus_comes
ENSELUG00000007990	fubp1	100	81.259	ENSIPUG00000009896	fubp1	100	81.709	Ictalurus_punctatus
ENSELUG00000007990	fubp1	70	74.836	ENSSTOG00000014312	FUBP1	100	68.684	Ictidomys_tridecemlineatus
ENSELUG00000007990	fubp1	70	74.459	ENSJJAG00000020069	Fubp1	100	76.190	Jaculus_jaculus
ENSELUG00000007990	fubp1	100	85.329	ENSKMAG00000018897	fubp1	100	83.084	Kryptolebias_marmoratus
ENSELUG00000007990	fubp1	99	83.947	ENSLBEG00000012700	fubp1	97	83.800	Labrus_bergylta
ENSELUG00000007990	fubp1	98	81.926	ENSLOCG00000003745	fubp1	99	80.842	Lepisosteus_oculatus
ENSELUG00000007990	fubp1	70	71.369	ENSLAFG00000003273	FUBP1	99	69.081	Loxodonta_africana
ENSELUG00000007990	fubp1	70	74.892	ENSMFAG00000031825	FUBP1	100	69.091	Macaca_fascicularis
ENSELUG00000007990	fubp1	70	75.055	ENSMMUG00000002899	FUBP1	100	68.835	Macaca_mulatta
ENSELUG00000007990	fubp1	70	74.514	ENSMNEG00000045212	FUBP1	100	68.835	Macaca_nemestrina
ENSELUG00000007990	fubp1	99	83.828	ENSMAMG00000007489	fubp1	99	82.641	Mastacembelus_armatus
ENSELUG00000007990	fubp1	100	85.113	ENSMZEG00005024298	fubp1	100	84.219	Maylandia_zebra
ENSELUG00000007990	fubp1	88	76.540	ENSMGAG00000009424	FUBP1	100	70.323	Meleagris_gallopavo
ENSELUG00000007990	fubp1	70	74.514	ENSMAUG00000016428	Fubp1	98	78.231	Mesocricetus_auratus
ENSELUG00000007990	fubp1	70	75.163	ENSMOCG00000014751	Fubp1	98	77.551	Microtus_ochrogaster
ENSELUG00000007990	fubp1	89	83.016	ENSMMOG00000019463	fubp1	99	82.226	Mola_mola
ENSELUG00000007990	fubp1	68	68.132	ENSMODG00000020804	FUBP1	100	63.385	Monodelphis_domestica
ENSELUG00000007990	fubp1	100	85.714	ENSMALG00000015173	fubp1	100	85.000	Monopterus_albus
ENSELUG00000007990	fubp1	70	75.328	MGP_CAROLIEiJ_G0025740	Fubp1	98	77.551	Mus_caroli
ENSELUG00000007990	fubp1	70	75.109	ENSMUSG00000028034	Fubp1	98	76.871	Mus_musculus
ENSELUG00000007990	fubp1	70	75.163	MGP_PahariEiJ_G0027191	Fubp1	98	77.551	Mus_pahari
ENSELUG00000007990	fubp1	70	75.328	MGP_SPRETEiJ_G0026693	Fubp1	98	77.551	Mus_spretus
ENSELUG00000007990	fubp1	70	70.637	ENSMLUG00000014802	FUBP1	100	66.521	Myotis_lucifugus
ENSELUG00000007990	fubp1	70	71.179	ENSNGAG00000014302	Fubp1	98	77.551	Nannospalax_galili
ENSELUG00000007990	fubp1	100	82.473	ENSNBRG00000015099	fubp1	100	81.377	Neolamprologus_brichardi
ENSELUG00000007990	fubp1	70	71.552	ENSNLEG00000009772	FUBP1	100	66.968	Nomascus_leucogenys
ENSELUG00000007990	fubp1	57	78.846	ENSMEUG00000007917	-	77	67.442	Notamacropus_eugenii
ENSELUG00000007990	fubp1	70	86.792	ENSOPRG00000001175	FUBP1	91	67.521	Ochotona_princeps
ENSELUG00000007990	fubp1	70	74.298	ENSODEG00000002600	-	100	76.190	Octodon_degus
ENSELUG00000007990	fubp1	99	53.594	ENSODEG00000003657	-	99	49.688	Octodon_degus
ENSELUG00000007990	fubp1	99	85.219	ENSONIG00000018381	fubp1	99	83.670	Oreochromis_niloticus
ENSELUG00000007990	fubp1	61	76.531	ENSOANG00000009777	FUBP1	99	68.116	Ornithorhynchus_anatinus
ENSELUG00000007990	fubp1	99	75.076	ENSORLG00000003540	fubp1	99	80.063	Oryzias_latipes
ENSELUG00000007990	fubp1	100	84.006	ENSORLG00020005908	fubp1	99	80.377	Oryzias_latipes_hni
ENSELUG00000007990	fubp1	100	84.030	ENSORLG00015008779	fubp1	100	82.946	Oryzias_latipes_hsok
ENSELUG00000007990	fubp1	100	83.683	ENSOMEG00000021943	fubp1	97	83.234	Oryzias_melastigma
ENSELUG00000007990	fubp1	70	70.492	ENSOGAG00000014233	FUBP1	100	65.988	Otolemur_garnettii
ENSELUG00000007990	fubp1	70	74.675	ENSOARG00000013259	FUBP1	100	70.147	Ovis_aries
ENSELUG00000007990	fubp1	70	74.298	ENSPPRG00000000413	FUBP1	100	68.684	Panthera_pardus
ENSELUG00000007990	fubp1	70	74.298	ENSPTIG00000019450	FUBP1	100	68.684	Panthera_tigris_altaica
ENSELUG00000007990	fubp1	89	75.758	ENSPSIG00000012965	FUBP1	99	69.637	Pelodiscus_sinensis
ENSELUG00000007990	fubp1	99	78.483	ENSPMGG00000009060	fubp1	99	75.659	Periophthalmus_magnuspinnatus
ENSELUG00000007990	fubp1	70	75.328	ENSPEMG00000021802	Fubp1	100	77.551	Peromyscus_maniculatus_bairdii
ENSELUG00000007990	fubp1	65	56.000	ENSPMAG00000001644	-	100	56.400	Petromyzon_marinus
ENSELUG00000007990	fubp1	100	85.263	ENSPFOG00000000238	fubp1	100	84.662	Poecilia_formosa
ENSELUG00000007990	fubp1	100	84.194	ENSPLAG00000021170	fubp1	100	82.316	Poecilia_latipinna
ENSELUG00000007990	fubp1	99	81.153	ENSPMEG00000004747	fubp1	99	84.679	Poecilia_mexicana
ENSELUG00000007990	fubp1	100	85.263	ENSPREG00000017911	fubp1	100	84.662	Poecilia_reticulata
ENSELUG00000007990	fubp1	77	74.419	ENSPPYG00000001219	-	68	74.892	Pongo_abelii
ENSELUG00000007990	fubp1	70	74.459	ENSPCAG00000012617	FUBP1	98	68.085	Procavia_capensis
ENSELUG00000007990	fubp1	92	71.036	ENSPCOG00000024974	FUBP1	100	68.684	Propithecus_coquereli
ENSELUG00000007990	fubp1	70	68.251	ENSPVAG00000014637	FUBP1	98	64.394	Pteropus_vampyrus
ENSELUG00000007990	fubp1	100	85.113	ENSPNYG00000004552	fubp1	100	84.219	Pundamilia_nyererei
ENSELUG00000007990	fubp1	100	86.657	ENSPNAG00000016207	fubp1	100	86.507	Pygocentrus_nattereri
ENSELUG00000007990	fubp1	70	75.328	ENSRNOG00000043370	Fubp1	100	68.437	Rattus_norvegicus
ENSELUG00000007990	fubp1	70	74.514	ENSRBIG00000042950	FUBP1	100	68.835	Rhinopithecus_bieti
ENSELUG00000007990	fubp1	70	74.514	ENSRROG00000043534	FUBP1	100	68.835	Rhinopithecus_roxellana
ENSELUG00000007990	fubp1	70	74.298	ENSSBOG00000027299	FUBP1	100	68.684	Saimiri_boliviensis_boliviensis
ENSELUG00000007990	fubp1	66	74.707	ENSSHAG00000005367	FUBP1	98	69.355	Sarcophilus_harrisii
ENSELUG00000007990	fubp1	99	85.984	ENSSFOG00015010213	fubp1	99	85.303	Scleropages_formosus
ENSELUG00000007990	fubp1	100	82.941	ENSSMAG00000012029	fubp1	98	83.088	Scophthalmus_maximus
ENSELUG00000007990	fubp1	100	84.911	ENSSDUG00000007383	fubp1	98	84.320	Seriola_dumerili
ENSELUG00000007990	fubp1	100	84.911	ENSSLDG00000022863	fubp1	98	84.332	Seriola_lalandi_dorsalis
ENSELUG00000007990	fubp1	70	86.207	ENSSARG00000011730	FUBP1	55	86.207	Sorex_araneus
ENSELUG00000007990	fubp1	99	67.852	ENSSPUG00000008389	FUBP1	100	66.667	Sphenodon_punctatus
ENSELUG00000007990	fubp1	100	86.767	ENSSPAG00000010161	fubp1	100	86.165	Stegastes_partitus
ENSELUG00000007990	fubp1	87	75.234	ENSTGUG00000006841	FUBP1	100	68.634	Taeniopygia_guttata
ENSELUG00000007990	fubp1	100	80.814	ENSTRUG00000004615	fubp1	100	80.087	Takifugu_rubripes
ENSELUG00000007990	fubp1	52	88.079	ENSTNIG00000019815	-	87	88.079	Tetraodon_nigroviridis
ENSELUG00000007990	fubp1	79	80.588	ENSTBEG00000017333	FUBP1	61	80.588	Tupaia_belangeri
ENSELUG00000007990	fubp1	70	74.298	ENSTTRG00000000096	FUBP1	98	68.485	Tursiops_truncatus
ENSELUG00000007990	fubp1	70	74.298	ENSVPAG00000004709	FUBP1	99	68.485	Vicugna_pacos
ENSELUG00000007990	fubp1	100	77.795	ENSXCOG00000019354	fubp1	100	77.019	Xiphophorus_couchianus
ENSELUG00000007990	fubp1	97	81.340	ENSXMAG00000007168	fubp1	99	84.514	Xiphophorus_maculatus