EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000008075 (Gene tree)
Gene ID: 105016857
Gene Symbol: rpusd4
Alias: si:ch211-14i3.3|zgc:92006
Full Name: RNA pseudouridine synthase D4
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 2133 bases
Position: chrLG17:9293993-9296125
Accession: 105016857
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000007295	PseudoU_synth_2	PF00849.22	2.4e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000007496	-	1149	XM_010880967	ENSELUP00000007295	382 (aa)	XP_010879269	UPI000576ED9E

Gene Model

Click here to download ENSELUG00000008075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000008075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000008075	rpusd4	87	53.293	ENSG00000165526	RPUSD4	93	50.820	Homo_sapiens
ENSELUG00000008075	rpusd4	99	62.042	ENSAPOG00000011024	rpusd4	93	62.042	Acanthochromis_polyacanthus
ENSELUG00000008075	rpusd4	59	56.731	ENSAMEG00000005953	-	97	56.731	Ailuropoda_melanoleuca
ENSELUG00000008075	rpusd4	95	53.279	ENSAMEG00000000127	-	92	53.279	Ailuropoda_melanoleuca
ENSELUG00000008075	rpusd4	88	61.424	ENSACIG00000003533	rpusd4	95	61.607	Amphilophus_citrinellus
ENSELUG00000008075	rpusd4	99	62.992	ENSAOCG00000015409	rpusd4	92	62.992	Amphiprion_ocellaris
ENSELUG00000008075	rpusd4	99	62.730	ENSAPEG00000018935	rpusd4	92	62.730	Amphiprion_percula
ENSELUG00000008075	rpusd4	99	60.367	ENSATEG00000008059	rpusd4	92	60.367	Anabas_testudineus
ENSELUG00000008075	rpusd4	73	57.500	ENSAPLG00000013250	RPUSD4	99	56.081	Anas_platyrhynchos
ENSELUG00000008075	rpusd4	87	53.293	ENSACAG00000000189	RPUSD4	88	53.293	Anolis_carolinensis
ENSELUG00000008075	rpusd4	87	53.433	ENSANAG00000024050	RPUSD4	87	53.433	Aotus_nancymaae
ENSELUG00000008075	rpusd4	99	60.526	ENSACLG00000020996	rpusd4	95	60.526	Astatotilapia_calliptera
ENSELUG00000008075	rpusd4	93	61.690	ENSAMXG00000031479	rpusd4	99	61.281	Astyanax_mexicanus
ENSELUG00000008075	rpusd4	87	54.328	ENSBTAG00000020900	RPUSD4	85	54.328	Bos_taurus
ENSELUG00000008075	rpusd4	95	51.934	ENSCJAG00000042850	RPUSD4	87	51.934	Callithrix_jacchus
ENSELUG00000008075	rpusd4	80	59.223	ENSCAFG00000010488	RPUSD4	95	53.125	Canis_familiaris
ENSELUG00000008075	rpusd4	80	59.223	ENSCAFG00020010621	RPUSD4	95	53.125	Canis_lupus_dingo
ENSELUG00000008075	rpusd4	87	53.731	ENSCHIG00000009975	RPUSD4	88	52.890	Capra_hircus
ENSELUG00000008075	rpusd4	96	52.589	ENSTSYG00000008456	RPUSD4	92	52.589	Carlito_syrichta
ENSELUG00000008075	rpusd4	63	56.379	ENSCAPG00000006040	RPUSD4	93	56.379	Cavia_aperea
ENSELUG00000008075	rpusd4	95	53.867	ENSCPOG00000014971	RPUSD4	91	53.867	Cavia_porcellus
ENSELUG00000008075	rpusd4	95	51.923	ENSCCAG00000027838	RPUSD4	93	51.923	Cebus_capucinus
ENSELUG00000008075	rpusd4	98	49.735	ENSCATG00000041570	RPUSD4	96	49.735	Cercocebus_atys
ENSELUG00000008075	rpusd4	98	53.067	ENSCLAG00000016553	RPUSD4	96	53.067	Chinchilla_lanigera
ENSELUG00000008075	rpusd4	98	50.265	ENSCSAG00000002274	RPUSD4	96	50.265	Chlorocebus_sabaeus
ENSELUG00000008075	rpusd4	72	56.989	ENSCHOG00000010249	RPUSD4	98	56.989	Choloepus_hoffmanni
ENSELUG00000008075	rpusd4	75	59.582	ENSCPBG00000011175	RPUSD4	99	59.582	Chrysemys_picta_bellii
ENSELUG00000008075	rpusd4	89	37.746	ENSCSAVG00000000872	-	66	37.746	Ciona_savignyi
ENSELUG00000008075	rpusd4	96	50.546	ENSCANG00000039684	RPUSD4	93	50.546	Colobus_angolensis_palliatus
ENSELUG00000008075	rpusd4	90	54.360	ENSCGRG00001024141	Rpusd4	88	54.360	Cricetulus_griseus_chok1gshd
ENSELUG00000008075	rpusd4	90	54.360	ENSCGRG00000014415	Rpusd4	88	54.360	Cricetulus_griseus_crigri
ENSELUG00000008075	rpusd4	97	56.720	ENSCVAG00000000392	rpusd4	99	56.720	Cyprinodon_variegatus
ENSELUG00000008075	rpusd4	91	59.195	ENSCVAG00000008761	rpusd4	91	57.104	Cyprinodon_variegatus
ENSELUG00000008075	rpusd4	80	61.639	ENSDARG00000012674	rpusd4	91	59.281	Danio_rerio
ENSELUG00000008075	rpusd4	91	54.286	ENSDNOG00000020026	RPUSD4	90	54.286	Dasypus_novemcinctus
ENSELUG00000008075	rpusd4	80	56.129	ENSDORG00000016717	Rpusd4	93	51.491	Dipodomys_ordii
ENSELUG00000008075	rpusd4	93	54.062	ENSETEG00000013953	RPUSD4	91	54.062	Echinops_telfairi
ENSELUG00000008075	rpusd4	89	53.913	ENSEASG00005022982	RPUSD4	88	53.913	Equus_asinus_asinus
ENSELUG00000008075	rpusd4	95	52.446	ENSECAG00000000557	RPUSD4	93	52.446	Equus_caballus
ENSELUG00000008075	rpusd4	78	59.116	ENSEEUG00000014036	RPUSD4	77	59.116	Erinaceus_europaeus
ENSELUG00000008075	rpusd4	80	57.097	ENSFCAG00000029789	RPUSD4	88	53.936	Felis_catus
ENSELUG00000008075	rpusd4	87	53.012	ENSFALG00000005171	RPUSD4	95	53.012	Ficedula_albicollis
ENSELUG00000008075	rpusd4	98	50.535	ENSFDAG00000014307	RPUSD4	97	50.535	Fukomys_damarensis
ENSELUG00000008075	rpusd4	95	58.904	ENSFHEG00000004329	rpusd4	92	58.904	Fundulus_heteroclitus
ENSELUG00000008075	rpusd4	87	60.843	ENSGMOG00000017726	rpusd4	98	59.587	Gadus_morhua
ENSELUG00000008075	rpusd4	73	58.571	ENSGALG00000024326	RPUSD4	94	52.601	Gallus_gallus
ENSELUG00000008075	rpusd4	97	57.373	ENSGAFG00000021559	rpusd4	94	57.373	Gambusia_affinis
ENSELUG00000008075	rpusd4	90	60.231	ENSGACG00000001657	rpusd4	97	64.875	Gasterosteus_aculeatus
ENSELUG00000008075	rpusd4	87	55.120	ENSGAGG00000000132	RPUSD4	89	55.120	Gopherus_agassizii
ENSELUG00000008075	rpusd4	87	53.593	ENSGGOG00000016494	RPUSD4	93	51.093	Gorilla_gorilla
ENSELUG00000008075	rpusd4	99	60.526	ENSHBUG00000022838	rpusd4	95	60.526	Haplochromis_burtoni
ENSELUG00000008075	rpusd4	96	51.639	ENSHGLG00000002285	RPUSD4	94	51.639	Heterocephalus_glaber_female
ENSELUG00000008075	rpusd4	96	51.639	ENSHGLG00100006385	RPUSD4	94	51.639	Heterocephalus_glaber_male
ENSELUG00000008075	rpusd4	97	61.230	ENSHCOG00000006612	rpusd4	93	61.230	Hippocampus_comes
ENSELUG00000008075	rpusd4	95	57.895	ENSIPUG00000023879	rusd4	91	57.895	Ictalurus_punctatus
ENSELUG00000008075	rpusd4	88	56.637	ENSSTOG00000025280	RPUSD4	89	56.637	Ictidomys_tridecemlineatus
ENSELUG00000008075	rpusd4	86	55.891	ENSJJAG00000018673	Rpusd4	89	55.891	Jaculus_jaculus
ENSELUG00000008075	rpusd4	89	62.391	ENSKMAG00000021805	rpusd4	87	62.391	Kryptolebias_marmoratus
ENSELUG00000008075	rpusd4	97	59.115	ENSLBEG00000020394	rpusd4	93	64.223	Labrus_bergylta
ENSELUG00000008075	rpusd4	87	56.456	ENSLACG00000011028	RPUSD4	89	53.571	Latimeria_chalumnae
ENSELUG00000008075	rpusd4	97	46.053	ENSLOCG00000003124	rpusd4	99	46.053	Lepisosteus_oculatus
ENSELUG00000008075	rpusd4	88	53.097	ENSLAFG00000005211	RPUSD4	100	46.758	Loxodonta_africana
ENSELUG00000008075	rpusd4	98	50.000	ENSMFAG00000039513	RPUSD4	96	50.000	Macaca_fascicularis
ENSELUG00000008075	rpusd4	98	50.000	ENSMMUG00000007933	RPUSD4	96	50.000	Macaca_mulatta
ENSELUG00000008075	rpusd4	98	50.000	ENSMNEG00000027414	RPUSD4	96	50.000	Macaca_nemestrina
ENSELUG00000008075	rpusd4	98	49.735	ENSMLEG00000042461	RPUSD4	96	49.735	Mandrillus_leucophaeus
ENSELUG00000008075	rpusd4	95	59.615	ENSMAMG00000023839	rpusd4	92	59.615	Mastacembelus_armatus
ENSELUG00000008075	rpusd4	99	60.526	ENSMZEG00005011999	rpusd4	95	60.526	Maylandia_zebra
ENSELUG00000008075	rpusd4	73	57.194	ENSMGAG00000000840	RPUSD4	99	52.599	Meleagris_gallopavo
ENSELUG00000008075	rpusd4	91	53.314	ENSMAUG00000010280	Rpusd4	89	53.314	Mesocricetus_auratus
ENSELUG00000008075	rpusd4	99	51.323	ENSMICG00000015979	RPUSD4	97	54.128	Microcebus_murinus
ENSELUG00000008075	rpusd4	90	53.353	ENSMOCG00000000661	Rpusd4	88	53.353	Microtus_ochrogaster
ENSELUG00000008075	rpusd4	79	66.007	ENSMMOG00000021731	rpusd4	90	66.007	Mola_mola
ENSELUG00000008075	rpusd4	84	56.563	ENSMODG00000004521	RPUSD4	79	56.563	Monodelphis_domestica
ENSELUG00000008075	rpusd4	80	64.078	ENSMALG00000005839	rpusd4	97	62.691	Monopterus_albus
ENSELUG00000008075	rpusd4	97	51.862	MGP_CAROLIEiJ_G0031954	Rpusd4	96	51.862	Mus_caroli
ENSELUG00000008075	rpusd4	97	51.862	ENSMUSG00000032044	Rpusd4	96	51.862	Mus_musculus
ENSELUG00000008075	rpusd4	93	52.958	MGP_PahariEiJ_G0014819	Rpusd4	91	52.958	Mus_pahari
ENSELUG00000008075	rpusd4	95	51.934	MGP_SPRETEiJ_G0033078	Rpusd4	93	51.934	Mus_spretus
ENSELUG00000008075	rpusd4	96	52.989	ENSMPUG00000006608	RPUSD4	93	52.989	Mustela_putorius_furo
ENSELUG00000008075	rpusd4	87	54.491	ENSMLUG00000017328	-	85	54.491	Myotis_lucifugus
ENSELUG00000008075	rpusd4	67	56.250	ENSMLUG00000029348	-	99	56.250	Myotis_lucifugus
ENSELUG00000008075	rpusd4	90	57.391	ENSNGAG00000020847	Rpusd4	88	57.391	Nannospalax_galili
ENSELUG00000008075	rpusd4	87	64.583	ENSNBRG00000005207	rpusd4	94	64.583	Neolamprologus_brichardi
ENSELUG00000008075	rpusd4	98	50.398	ENSNLEG00000007465	RPUSD4	95	50.398	Nomascus_leucogenys
ENSELUG00000008075	rpusd4	88	54.734	ENSMEUG00000004370	RPUSD4	88	54.734	Notamacropus_eugenii
ENSELUG00000008075	rpusd4	90	53.468	ENSODEG00000004577	RPUSD4	88	53.468	Octodon_degus
ENSELUG00000008075	rpusd4	99	61.842	ENSONIG00000018879	rpusd4	93	64.146	Oreochromis_niloticus
ENSELUG00000008075	rpusd4	76	54.576	ENSOANG00000007247	RPUSD4	96	53.974	Ornithorhynchus_anatinus
ENSELUG00000008075	rpusd4	89	55.132	ENSOCUG00000017039	RPUSD4	88	55.233	Oryctolagus_cuniculus
ENSELUG00000008075	rpusd4	92	59.490	ENSORLG00000002750	rpusd4	93	59.544	Oryzias_latipes
ENSELUG00000008075	rpusd4	94	57.618	ENSORLG00020002044	rpusd4	88	57.618	Oryzias_latipes_hni
ENSELUG00000008075	rpusd4	94	57.618	ENSORLG00015020034	rpusd4	88	57.618	Oryzias_latipes_hsok
ENSELUG00000008075	rpusd4	94	59.504	ENSOMEG00000004861	rpusd4	87	59.504	Oryzias_melastigma
ENSELUG00000008075	rpusd4	80	59.804	ENSOGAG00000008922	RPUSD4	90	54.420	Otolemur_garnettii
ENSELUG00000008075	rpusd4	87	53.731	ENSOARG00000012238	RPUSD4	88	52.890	Ovis_aries
ENSELUG00000008075	rpusd4	87	53.293	ENSPPAG00000042883	RPUSD4	86	50.820	Pan_paniscus
ENSELUG00000008075	rpusd4	89	53.936	ENSPPRG00000003081	RPUSD4	88	53.936	Panthera_pardus
ENSELUG00000008075	rpusd4	89	53.936	ENSPTIG00000012059	RPUSD4	88	57.097	Panthera_tigris_altaica
ENSELUG00000008075	rpusd4	87	53.293	ENSPTRG00000004454	RPUSD4	93	50.820	Pan_troglodytes
ENSELUG00000008075	rpusd4	98	50.000	ENSPANG00000015040	RPUSD4	96	50.000	Papio_anubis
ENSELUG00000008075	rpusd4	93	61.453	ENSPKIG00000023986	rpusd4	89	61.453	Paramormyrops_kingsleyae
ENSELUG00000008075	rpusd4	79	59.136	ENSPSIG00000014268	RPUSD4	95	59.136	Pelodiscus_sinensis
ENSELUG00000008075	rpusd4	93	59.116	ENSPMGG00000002806	rpusd4	93	59.116	Periophthalmus_magnuspinnatus
ENSELUG00000008075	rpusd4	93	47.042	ENSPEMG00000000278	Rpusd4	90	47.042	Peromyscus_maniculatus_bairdii
ENSELUG00000008075	rpusd4	81	42.229	ENSPMAG00000008183	rpusd4	99	42.229	Petromyzon_marinus
ENSELUG00000008075	rpusd4	87	55.522	ENSPCIG00000010212	RPUSD4	89	55.522	Phascolarctos_cinereus
ENSELUG00000008075	rpusd4	97	58.511	ENSPFOG00000019030	rpusd4	97	58.511	Poecilia_formosa
ENSELUG00000008075	rpusd4	97	58.824	ENSPLAG00000016848	rpusd4	94	58.824	Poecilia_latipinna
ENSELUG00000008075	rpusd4	97	58.289	ENSPMEG00000017534	rpusd4	94	58.289	Poecilia_mexicana
ENSELUG00000008075	rpusd4	94	57.459	ENSPREG00000005689	rpusd4	92	57.459	Poecilia_reticulata
ENSELUG00000008075	rpusd4	96	50.273	ENSPPYG00000004043	RPUSD4	93	50.273	Pongo_abelii
ENSELUG00000008075	rpusd4	74	57.297	ENSPCAG00000000753	RPUSD4	73	57.297	Procavia_capensis
ENSELUG00000008075	rpusd4	96	49.728	ENSPCOG00000020694	RPUSD4	93	49.728	Propithecus_coquereli
ENSELUG00000008075	rpusd4	95	53.425	ENSPVAG00000000988	RPUSD4	93	53.425	Pteropus_vampyrus
ENSELUG00000008075	rpusd4	99	60.789	ENSPNYG00000009652	rpusd4	95	60.789	Pundamilia_nyererei
ENSELUG00000008075	rpusd4	93	60.111	ENSPNAG00000012264	rpusd4	92	60.111	Pygocentrus_nattereri
ENSELUG00000008075	rpusd4	94	52.198	ENSRNOG00000011567	Rpusd4	92	52.055	Rattus_norvegicus
ENSELUG00000008075	rpusd4	88	52.083	ENSRBIG00000034842	RPUSD4	90	51.170	Rhinopithecus_bieti
ENSELUG00000008075	rpusd4	88	52.083	ENSRROG00000039753	RPUSD4	90	51.170	Rhinopithecus_roxellana
ENSELUG00000008075	rpusd4	96	51.087	ENSSBOG00000030413	RPUSD4	94	51.087	Saimiri_boliviensis_boliviensis
ENSELUG00000008075	rpusd4	79	56.766	ENSSHAG00000008304	RPUSD4	99	56.766	Sarcophilus_harrisii
ENSELUG00000008075	rpusd4	89	61.290	ENSSFOG00015006203	rpusd4	91	62.170	Scleropages_formosus
ENSELUG00000008075	rpusd4	99	62.205	ENSSMAG00000020978	rpusd4	95	62.205	Scophthalmus_maximus
ENSELUG00000008075	rpusd4	99	57.784	ENSSDUG00000013399	rpusd4	95	57.784	Seriola_dumerili
ENSELUG00000008075	rpusd4	99	58.311	ENSSLDG00000023507	rpusd4	95	58.311	Seriola_lalandi_dorsalis
ENSELUG00000008075	rpusd4	78	59.667	ENSSPUG00000001401	RPUSD4	93	55.202	Sphenodon_punctatus
ENSELUG00000008075	rpusd4	99	60.892	ENSSPAG00000012163	rpusd4	93	60.892	Stegastes_partitus
ENSELUG00000008075	rpusd4	94	52.909	ENSSSCG00000015233	RPUSD4	92	52.909	Sus_scrofa
ENSELUG00000008075	rpusd4	79	56.333	ENSTGUG00000000773	RPUSD4	100	56.333	Taeniopygia_guttata
ENSELUG00000008075	rpusd4	92	56.825	ENSTRUG00000012283	rpusd4	90	56.825	Takifugu_rubripes
ENSELUG00000008075	rpusd4	89	59.710	ENSTNIG00000014676	rpusd4	85	59.710	Tetraodon_nigroviridis
ENSELUG00000008075	rpusd4	89	53.959	ENSTTRG00000001555	RPUSD4	87	53.959	Tursiops_truncatus
ENSELUG00000008075	rpusd4	95	53.279	ENSUMAG00000002219	RPUSD4	92	53.279	Ursus_maritimus
ENSELUG00000008075	rpusd4	64	51.626	ENSVPAG00000001066	RPUSD4	88	51.626	Vicugna_pacos
ENSELUG00000008075	rpusd4	80	59.223	ENSVVUG00000020101	RPUSD4	95	53.125	Vulpes_vulpes
ENSELUG00000008075	rpusd4	97	57.373	ENSXCOG00000004676	rpusd4	94	57.373	Xiphophorus_couchianus
ENSELUG00000008075	rpusd4	97	57.373	ENSXMAG00000023351	rpusd4	94	57.373	Xiphophorus_maculatus