EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000008166 (Gene tree)
Gene ID: 105030641
Gene Symbol: rbm46
Alias: fe11d09|wu:fe11d09|zgc:153695
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 14950 bases
Position: chrLG24:20246772-20261721
Accession: 105030641
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000007313	RRM_1	PF00076.22	2.7e-33	1	3
ENSELUP00000007313	RRM_1	PF00076.22	2.7e-33	2	3
ENSELUP00000007313	RRM_1	PF00076.22	2.7e-33	3	3
ENSELUP00000030808	RRM_1	PF00076.22	3.9e-33	1	3
ENSELUP00000030808	RRM_1	PF00076.22	3.9e-33	2	3
ENSELUP00000030808	RRM_1	PF00076.22	3.9e-33	3	3
ENSELUP00000030820	RRM_1	PF00076.22	6.5e-33	1	3
ENSELUP00000030820	RRM_1	PF00076.22	6.5e-33	2	3
ENSELUP00000030820	RRM_1	PF00076.22	6.5e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000007389	-	3878	-	ENSELUP00000030820	462 (aa)	-	-
ENSELUT00000007360	-	3865	XM_020043319	ENSELUP00000030808	414 (aa)	XP_019898878	-
ENSELUT00000007473	-	3031	-	ENSELUP00000007313	381 (aa)	-	-

Gene Model

Click here to download ENSELUG00000008166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000008166's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000008166	rbm46	82	53.333	ENSELUG00000013519	syncripl	59	51.376
ENSELUG00000008166	rbm46	78	64.527	ENSELUG00000003159	a1cf	52	63.816
ENSELUG00000008166	rbm46	54	35.266	ENSELUG00000002636	dnd1	53	36.041
ENSELUG00000008166	rbm46	82	52.063	ENSELUG00000016493	syncrip	51	51.682
ENSELUG00000008166	rbm46	80	52.104	ENSELUG00000014625	HNRNPR	50	50.779
ENSELUG00000008166	rbm46	80	51.623	ENSELUG00000006441	hnrnpr	51	49.688
ENSELUG00000008166	rbm46	78	68.562	ENSELUG00000006148	rbm47	55	66.890

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000008166	rbm46	94	70.745	ENSG00000151962	RBM46	85	91.150	Homo_sapiens
ENSELUG00000008166	rbm46	94	73.727	ENSAPOG00000009209	rbm46	74	73.727	Acanthochromis_polyacanthus
ENSELUG00000008166	rbm46	98	70.681	ENSAMEG00000013290	RBM46	69	72.480	Ailuropoda_melanoleuca
ENSELUG00000008166	rbm46	94	71.667	ENSACIG00000014500	rbm46	63	80.795	Amphilophus_citrinellus
ENSELUG00000008166	rbm46	94	73.611	ENSAOCG00000001892	-	70	73.611	Amphiprion_ocellaris
ENSELUG00000008166	rbm46	94	73.056	ENSAPEG00000017762	rbm46	79	73.611	Amphiprion_percula
ENSELUG00000008166	rbm46	99	71.318	ENSATEG00000010775	rbm46	68	77.745	Anabas_testudineus
ENSELUG00000008166	rbm46	95	69.973	ENSAPLG00000005116	RBM46	79	70.350	Anas_platyrhynchos
ENSELUG00000008166	rbm46	94	74.167	ENSACAG00000015599	RBM46	68	74.167	Anolis_carolinensis
ENSELUG00000008166	rbm46	98	69.565	ENSANAG00000029193	RBM46	81	71.204	Aotus_nancymaae
ENSELUG00000008166	rbm46	97	69.430	ENSACLG00000016153	rbm46	69	70.153	Astatotilapia_calliptera
ENSELUG00000008166	rbm46	97	73.995	ENSAMXG00000009397	rbm46	82	74.194	Astyanax_mexicanus
ENSELUG00000008166	rbm46	96	68.367	ENSAMXG00000020892	-	74	68.542	Astyanax_mexicanus
ENSELUG00000008166	rbm46	98	70.419	ENSBTAG00000001696	RBM46	79	70.419	Bos_taurus
ENSELUG00000008166	rbm46	98	70.419	ENSCJAG00000001768	RBM46	78	72.207	Callithrix_jacchus
ENSELUG00000008166	rbm46	94	72.480	ENSCAFG00000008473	RBM46	76	72.480	Canis_familiaris
ENSELUG00000008166	rbm46	94	72.480	ENSCAFG00020002468	RBM46	74	72.480	Canis_lupus_dingo
ENSELUG00000008166	rbm46	98	70.681	ENSCHIG00000000502	RBM46	79	70.681	Capra_hircus
ENSELUG00000008166	rbm46	98	70.681	ENSTSYG00000010435	RBM46	81	70.419	Carlito_syrichta
ENSELUG00000008166	rbm46	96	68.519	ENSCAPG00000011841	-	98	69.355	Cavia_aperea
ENSELUG00000008166	rbm46	94	69.947	ENSCAPG00000011928	-	76	69.947	Cavia_aperea
ENSELUG00000008166	rbm46	94	69.947	ENSCPOG00000010284	-	78	69.947	Cavia_porcellus
ENSELUG00000008166	rbm46	98	68.930	ENSCPOG00000019272	-	71	68.930	Cavia_porcellus
ENSELUG00000008166	rbm46	98	68.286	ENSCPOG00000020396	-	76	69.509	Cavia_porcellus
ENSELUG00000008166	rbm46	94	59.128	ENSCCAG00000001323	-	74	59.128	Cebus_capucinus
ENSELUG00000008166	rbm46	98	69.309	ENSCCAG00000027619	-	81	70.942	Cebus_capucinus
ENSELUG00000008166	rbm46	98	69.054	ENSCATG00000040148	RBM46	81	70.681	Cercocebus_atys
ENSELUG00000008166	rbm46	94	71.935	ENSCLAG00000005846	-	78	71.935	Chinchilla_lanigera
ENSELUG00000008166	rbm46	94	71.505	ENSCLAG00000011886	-	71	71.505	Chinchilla_lanigera
ENSELUG00000008166	rbm46	98	69.054	ENSCSAG00000003263	RBM46	71	70.681	Chlorocebus_sabaeus
ENSELUG00000008166	rbm46	98	68.718	ENSCHOG00000003429	RBM46	71	68.718	Choloepus_hoffmanni
ENSELUG00000008166	rbm46	95	70.899	ENSCPBG00000009314	RBM46	80	71.277	Chrysemys_picta_bellii
ENSELUG00000008166	rbm46	98	69.054	ENSCANG00000039065	RBM46	81	70.681	Colobus_angolensis_palliatus
ENSELUG00000008166	rbm46	95	70.370	ENSCGRG00001016714	Rbm46	78	72.480	Cricetulus_griseus_chok1gshd
ENSELUG00000008166	rbm46	95	70.370	ENSCGRG00000011738	Rbm46	78	72.480	Cricetulus_griseus_crigri
ENSELUG00000008166	rbm46	95	64.011	ENSCSEG00000005530	rbm46	79	64.011	Cynoglossus_semilaevis
ENSELUG00000008166	rbm46	94	69.444	ENSCVAG00000021013	rbm46	76	69.444	Cyprinodon_variegatus
ENSELUG00000008166	rbm46	97	73.107	ENSDARG00000079452	rbm46	73	74.271	Danio_rerio
ENSELUG00000008166	rbm46	98	69.309	ENSDNOG00000016195	RBM46	71	69.309	Dasypus_novemcinctus
ENSELUG00000008166	rbm46	99	68.528	ENSDORG00000006405	Rbm46	78	72.480	Dipodomys_ordii
ENSELUG00000008166	rbm46	98	71.204	ENSETEG00000014902	RBM46	71	71.204	Echinops_telfairi
ENSELUG00000008166	rbm46	98	70.496	ENSEASG00005015821	RBM46	69	72.283	Equus_asinus_asinus
ENSELUG00000008166	rbm46	98	70.496	ENSECAG00000007649	RBM46	79	70.496	Equus_caballus
ENSELUG00000008166	rbm46	99	68.831	ENSEEUG00000011824	RBM46	72	68.831	Erinaceus_europaeus
ENSELUG00000008166	rbm46	98	70.681	ENSFCAG00000029812	RBM46	78	72.480	Felis_catus
ENSELUG00000008166	rbm46	94	71.117	ENSFALG00000013157	RBM46	72	71.117	Ficedula_albicollis
ENSELUG00000008166	rbm46	94	70.572	ENSFDAG00000019281	-	69	70.572	Fukomys_damarensis
ENSELUG00000008166	rbm46	98	66.497	ENSFDAG00000006445	-	75	68.229	Fukomys_damarensis
ENSELUG00000008166	rbm46	83	71.473	ENSFHEG00000013257	rbm46	82	74.510	Fundulus_heteroclitus
ENSELUG00000008166	rbm46	92	63.760	ENSGALG00000009278	RBM46	82	61.735	Gallus_gallus
ENSELUG00000008166	rbm46	80	81.759	ENSGAFG00000020245	rbm46	71	81.759	Gambusia_affinis
ENSELUG00000008166	rbm46	95	70.899	ENSGAGG00000002019	RBM46	70	72.043	Gopherus_agassizii
ENSELUG00000008166	rbm46	98	69.054	ENSGGOG00000001876	RBM46	81	70.681	Gorilla_gorilla
ENSELUG00000008166	rbm46	97	70.889	ENSHBUG00000009609	rbm46	85	70.408	Haplochromis_burtoni
ENSELUG00000008166	rbm46	98	67.949	ENSHGLG00000002463	-	88	69.554	Heterocephalus_glaber_female
ENSELUG00000008166	rbm46	98	62.269	ENSHGLG00000010742	-	74	61.741	Heterocephalus_glaber_female
ENSELUG00000008166	rbm46	80	68.301	ENSHGLG00000002940	-	59	68.301	Heterocephalus_glaber_female
ENSELUG00000008166	rbm46	95	60.434	ENSHGLG00100018987	-	70	61.864	Heterocephalus_glaber_male
ENSELUG00000008166	rbm46	98	67.692	ENSHGLG00100012752	-	78	71.038	Heterocephalus_glaber_male
ENSELUG00000008166	rbm46	98	62.269	ENSHGLG00100004977	-	74	61.741	Heterocephalus_glaber_male
ENSELUG00000008166	rbm46	94	54.645	ENSHCOG00000012998	rbm46	86	56.402	Hippocampus_comes
ENSELUG00000008166	rbm46	99	71.287	ENSIPUG00000024038	rbm46	80	70.720	Ictalurus_punctatus
ENSELUG00000008166	rbm46	95	70.370	ENSSTOG00000007918	RBM46	78	70.745	Ictidomys_tridecemlineatus
ENSELUG00000008166	rbm46	94	73.641	ENSJJAG00000003902	Rbm46	78	73.641	Jaculus_jaculus
ENSELUG00000008166	rbm46	99	70.466	ENSKMAG00000015127	rbm46	64	79.692	Kryptolebias_marmoratus
ENSELUG00000008166	rbm46	95	71.429	ENSLACG00000002062	RBM46	69	71.429	Latimeria_chalumnae
ENSELUG00000008166	rbm46	99	72.868	ENSLOCG00000008298	rbm46	83	72.868	Lepisosteus_oculatus
ENSELUG00000008166	rbm46	98	70.942	ENSLAFG00000015448	RBM46	81	70.942	Loxodonta_africana
ENSELUG00000008166	rbm46	98	69.054	ENSMFAG00000043485	RBM46	81	70.681	Macaca_fascicularis
ENSELUG00000008166	rbm46	98	69.054	ENSMMUG00000021147	RBM46	79	70.681	Macaca_mulatta
ENSELUG00000008166	rbm46	98	69.054	ENSMNEG00000002787	RBM46	81	70.681	Macaca_nemestrina
ENSELUG00000008166	rbm46	98	69.054	ENSMLEG00000029756	RBM46	81	70.681	Mandrillus_leucophaeus
ENSELUG00000008166	rbm46	94	76.359	ENSMAMG00000009093	rbm46	73	76.087	Mastacembelus_armatus
ENSELUG00000008166	rbm46	97	71.892	ENSMZEG00005027849	rbm46	78	72.800	Maylandia_zebra
ENSELUG00000008166	rbm46	92	65.546	ENSMGAG00000001457	RBM46	82	62.532	Meleagris_gallopavo
ENSELUG00000008166	rbm46	95	70.370	ENSMAUG00000009911	Rbm46	78	72.480	Mesocricetus_auratus
ENSELUG00000008166	rbm46	98	70.942	ENSMICG00000042747	RBM46	81	70.942	Microcebus_murinus
ENSELUG00000008166	rbm46	95	72.087	ENSMOCG00000001188	Rbm46	78	72.480	Microtus_ochrogaster
ENSELUG00000008166	rbm46	99	65.482	ENSMMOG00000011214	rbm46	75	65.482	Mola_mola
ENSELUG00000008166	rbm46	94	72.826	ENSMODG00000001302	RBM46	63	72.826	Monodelphis_domestica
ENSELUG00000008166	rbm46	97	71.011	ENSMALG00000006185	rbm46	78	72.131	Monopterus_albus
ENSELUG00000008166	rbm46	98	69.054	MGP_CAROLIEiJ_G0025101	Rbm46	81	70.681	Mus_caroli
ENSELUG00000008166	rbm46	98	69.309	ENSMUSG00000033882	Rbm46	81	70.942	Mus_musculus
ENSELUG00000008166	rbm46	98	69.054	MGP_PahariEiJ_G0026544	Rbm46	81	69.054	Mus_pahari
ENSELUG00000008166	rbm46	98	69.309	MGP_SPRETEiJ_G0026043	Rbm46	80	84.080	Mus_spretus
ENSELUG00000008166	rbm46	98	69.054	ENSMPUG00000005670	RBM46	79	70.681	Mustela_putorius_furo
ENSELUG00000008166	rbm46	98	69.133	ENSMLUG00000003221	RBM46	72	69.133	Myotis_lucifugus
ENSELUG00000008166	rbm46	98	68.542	ENSNGAG00000004231	Rbm46	81	70.157	Nannospalax_galili
ENSELUG00000008166	rbm46	97	71.429	ENSNBRG00000000273	rbm46	65	79.624	Neolamprologus_brichardi
ENSELUG00000008166	rbm46	98	68.798	ENSNLEG00000006184	RBM46	81	70.419	Nomascus_leucogenys
ENSELUG00000008166	rbm46	86	70.920	ENSMEUG00000013328	RBM46	79	70.393	Notamacropus_eugenii
ENSELUG00000008166	rbm46	73	80.144	ENSOPRG00000007136	RBM46	98	81.227	Ochotona_princeps
ENSELUG00000008166	rbm46	98	69.974	ENSODEG00000018002	-	74	69.974	Octodon_degus
ENSELUG00000008166	rbm46	94	69.681	ENSODEG00000000735	-	78	69.681	Octodon_degus
ENSELUG00000008166	rbm46	94	72.237	ENSONIG00000014096	rbm46	79	72.237	Oreochromis_niloticus
ENSELUG00000008166	rbm46	94	72.283	ENSOANG00000002141	RBM46	76	72.283	Ornithorhynchus_anatinus
ENSELUG00000008166	rbm46	98	70.681	ENSOCUG00000017859	RBM46	71	70.681	Oryctolagus_cuniculus
ENSELUG00000008166	rbm46	97	68.194	ENSORLG00000002429	rbm46	75	68.254	Oryzias_latipes
ENSELUG00000008166	rbm46	97	67.095	ENSORLG00020022154	rbm46	69	69.291	Oryzias_latipes_hni
ENSELUG00000008166	rbm46	97	68.733	ENSORLG00015020234	rbm46	77	68.490	Oryzias_latipes_hsok
ENSELUG00000008166	rbm46	95	65.394	ENSOMEG00000022580	rbm46	71	67.105	Oryzias_melastigma
ENSELUG00000008166	rbm46	98	70.942	ENSOGAG00000005647	RBM46	71	70.942	Otolemur_garnettii
ENSELUG00000008166	rbm46	98	70.681	ENSOARG00000016406	RBM46	79	70.681	Ovis_aries
ENSELUG00000008166	rbm46	98	69.054	ENSPPAG00000043236	RBM46	81	70.681	Pan_paniscus
ENSELUG00000008166	rbm46	98	70.681	ENSPPRG00000009416	RBM46	78	72.480	Panthera_pardus
ENSELUG00000008166	rbm46	98	70.681	ENSPTIG00000017449	RBM46	78	72.480	Panthera_tigris_altaica
ENSELUG00000008166	rbm46	98	69.054	ENSPTRG00000016538	RBM46	81	70.681	Pan_troglodytes
ENSELUG00000008166	rbm46	98	69.054	ENSPANG00000004186	RBM46	81	70.681	Papio_anubis
ENSELUG00000008166	rbm46	97	72.966	ENSPKIG00000015334	rbm46	66	72.966	Paramormyrops_kingsleyae
ENSELUG00000008166	rbm46	95	70.899	ENSPSIG00000006429	RBM46	75	71.277	Pelodiscus_sinensis
ENSELUG00000008166	rbm46	70	86.891	ENSPMGG00000019872	rbm46	64	86.891	Periophthalmus_magnuspinnatus
ENSELUG00000008166	rbm46	95	70.370	ENSPEMG00000013899	Rbm46	78	72.480	Peromyscus_maniculatus_bairdii
ENSELUG00000008166	rbm46	95	72.162	ENSPCIG00000029626	RBM46	76	72.554	Phascolarctos_cinereus
ENSELUG00000008166	rbm46	82	79.560	ENSPFOG00000001079	rbm46	58	79.560	Poecilia_formosa
ENSELUG00000008166	rbm46	97	71.809	ENSPLAG00000004541	rbm46	66	71.277	Poecilia_latipinna
ENSELUG00000008166	rbm46	97	71.809	ENSPMEG00000015724	rbm46	67	81.290	Poecilia_mexicana
ENSELUG00000008166	rbm46	97	71.809	ENSPREG00000014464	rbm46	79	69.761	Poecilia_reticulata
ENSELUG00000008166	rbm46	94	70.745	ENSPPYG00000015144	RBM46	69	72.480	Pongo_abelii
ENSELUG00000008166	rbm46	98	65.183	ENSPCAG00000003110	RBM46	71	65.445	Procavia_capensis
ENSELUG00000008166	rbm46	98	70.157	ENSPCOG00000024347	RBM46	78	71.935	Propithecus_coquereli
ENSELUG00000008166	rbm46	98	70.681	ENSPVAG00000008376	RBM46	71	70.681	Pteropus_vampyrus
ENSELUG00000008166	rbm46	96	76.667	ENSPNAG00000025312	rbm46	74	76.864	Pygocentrus_nattereri
ENSELUG00000008166	rbm46	98	69.054	ENSRNOG00000025823	Rbm46	71	70.681	Rattus_norvegicus
ENSELUG00000008166	rbm46	98	69.309	ENSRBIG00000032583	RBM46	81	69.309	Rhinopithecus_bieti
ENSELUG00000008166	rbm46	98	69.309	ENSRROG00000044288	RBM46	81	69.309	Rhinopithecus_roxellana
ENSELUG00000008166	rbm46	98	69.054	ENSSBOG00000033028	RBM46	81	70.681	Saimiri_boliviensis_boliviensis
ENSELUG00000008166	rbm46	94	72.826	ENSSHAG00000012596	RBM46	69	72.826	Sarcophilus_harrisii
ENSELUG00000008166	rbm46	99	71.059	ENSSFOG00015000087	rbm46	74	70.725	Scleropages_formosus
ENSELUG00000008166	rbm46	94	70.474	ENSSMAG00000017042	rbm46	76	70.474	Scophthalmus_maximus
ENSELUG00000008166	rbm46	99	72.680	ENSSDUG00000020645	rbm46	76	72.680	Seriola_dumerili
ENSELUG00000008166	rbm46	98	71.204	ENSSARG00000006520	RBM46	71	71.204	Sorex_araneus
ENSELUG00000008166	rbm46	94	72.283	ENSSPUG00000012525	-	68	72.283	Sphenodon_punctatus
ENSELUG00000008166	rbm46	95	71.816	ENSSPUG00000004773	-	77	72.207	Sphenodon_punctatus
ENSELUG00000008166	rbm46	97	71.467	ENSSPAG00000013697	rbm46	68	82.237	Stegastes_partitus
ENSELUG00000008166	rbm46	98	70.681	ENSSSCG00000008994	RBM46	79	70.681	Sus_scrofa
ENSELUG00000008166	rbm46	94	69.482	ENSTGUG00000005307	RBM46	79	69.482	Taeniopygia_guttata
ENSELUG00000008166	rbm46	98	68.533	ENSTRUG00000004237	rbm46	77	68.533	Takifugu_rubripes
ENSELUG00000008166	rbm46	98	67.183	ENSTNIG00000008714	rbm46	69	69.437	Tetraodon_nigroviridis
ENSELUG00000008166	rbm46	94	70.572	ENSTBEG00000013949	RBM46	69	70.572	Tupaia_belangeri
ENSELUG00000008166	rbm46	98	70.681	ENSTTRG00000001239	RBM46	71	70.681	Tursiops_truncatus
ENSELUG00000008166	rbm46	98	70.681	ENSUAMG00000026593	RBM46	79	70.681	Ursus_americanus
ENSELUG00000008166	rbm46	98	70.681	ENSUMAG00000016442	RBM46	79	70.681	Ursus_maritimus
ENSELUG00000008166	rbm46	98	70.681	ENSVVUG00000024957	RBM46	81	70.681	Vulpes_vulpes
ENSELUG00000008166	rbm46	94	66.310	ENSXETG00000022412	-	68	66.310	Xenopus_tropicalis
ENSELUG00000008166	rbm46	94	43.421	ENSXETG00000032344	-	69	43.421	Xenopus_tropicalis
ENSELUG00000008166	rbm46	80	66.776	ENSXETG00000032067	-	83	65.147	Xenopus_tropicalis
ENSELUG00000008166	rbm46	94	72.778	ENSXMAG00000008237	rbm46	61	83.165	Xiphophorus_maculatus