EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000008294 (Gene tree)
Gene ID: 105026372
Gene Symbol: -
Alias: -
Full Name: calreticulin
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 2580 bases
Position: chrLG08:18204519-18207098
Accession: 105026372
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000007513	Calreticulin	PF00262.18	1.8e-76	1	2
ENSELUP00000007513	Calreticulin	PF00262.18	1.8e-76	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000007137	-	1152	XM_010897784	ENSELUP00000007513	383 (aa)	XP_010896086	-

Gene Model

Click here to download ENSELUG00000008294's gene model file

Pathways

Pathway ID	Pathway Name	Source
els04141	Protein processing in endoplasmic reticulum	KEGG
els04145	Phagosome	KEGG
els05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000008294's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000008294	-	80	38.781	ENSELUG00000011262	clgn	66	39.535
ENSELUG00000008294	-	85	67.590	ENSELUG00000022861	CALR3	86	67.590
ENSELUG00000008294	-	84	67.416	ENSELUG00000014098	calr3b	86	66.298
ENSELUG00000008294	-	76	39.481	ENSELUG00000021763	canx	57	39.481
ENSELUG00000008294	-	93	54.255	ENSELUG00000023714	-	78	61.386

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000008294	-	86	76.309	ENSAMXG00000018577	-	86	76.309	Astyanax_mexicanus
ENSELUG00000008294	-	82	74.922	ENSCAFG00000017093	CALR	89	67.956	Canis_familiaris
ENSELUG00000008294	-	80	80.782	ENSCPBG00000023916	-	84	80.259	Chrysemys_picta_bellii
ENSELUG00000008294	-	86	67.127	ENSDARG00000103979	calr3a	86	67.127	Danio_rerio
ENSELUG00000008294	-	74	34.493	FBgn0264077	Cnx14D	53	34.795	Drosophila_melanogaster
ENSELUG00000008294	-	84	68.323	FBgn0005585	Calr	76	69.156	Drosophila_melanogaster
ENSELUG00000008294	-	86	64.671	ENSEBUG00000008568	calr3a	84	60.497	Eptatretus_burgeri
ENSELUG00000008294	-	86	78.056	ENSFHEG00000000123	-	85	78.056	Fundulus_heteroclitus
ENSELUG00000008294	-	86	85.671	ENSMAMG00000003716	-	83	85.671	Mastacembelus_armatus
ENSELUG00000008294	-	86	76.374	ENSMMOG00000020031	-	83	76.374	Mola_mola
ENSELUG00000008294	-	80	76.873	ENSMLUG00000012776	-	87	68.232	Myotis_lucifugus
ENSELUG00000008294	-	86	66.022	ENSORLG00000017171	-	84	66.022	Oryzias_latipes
ENSELUG00000008294	-	86	84.451	ENSOMEG00000010424	-	84	84.451	Oryzias_melastigma
ENSELUG00000008294	-	80	78.710	ENSPSIG00000012928	-	80	78.205	Pelodiscus_sinensis
ENSELUG00000008294	-	75	39.595	ENSPSIG00000009344	-	54	39.595	Pelodiscus_sinensis
ENSELUG00000008294	-	75	39.535	ENSPSIG00000003895	-	60	38.953	Pelodiscus_sinensis
ENSELUG00000008294	-	86	77.624	ENSPNAG00000016813	-	100	75.772	Pygocentrus_nattereri
ENSELUG00000008294	-	87	74.251	ENSSMAG00000005047	calr3a	82	74.691	Scophthalmus_maximus
ENSELUG00000008294	-	83	36.548	ENSSLDG00000020527	-	70	36.641	Seriola_lalandi_dorsalis
ENSELUG00000008294	-	86	75.691	ENSTRUG00000004597	-	84	75.691	Takifugu_rubripes
ENSELUG00000008294	-	86	68.320	ENSXETG00000007937	calr	87	68.508	Xenopus_tropicalis