EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000008382 (Gene tree)
Gene ID: 105029313
Gene Symbol: sbds
Alias: zgc:56700
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 7260 bases
Position: chrLG01:14928614-14935873
Accession: 105029313
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000007604	SBDS	PF01172.18	3.4e-33	1	1
ENSELUP00000007604	SBDS_C	PF09377.10	1.1e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000006978	-	4601	XM_010902645	ENSELUP00000007604	250 (aa)	XP_010900947	UPI000577CD88

Gene Model

Click here to download ENSELUG00000008382's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000008382's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000008382	sbds	100	82.000	ENSG00000126524	SBDS	97	86.747	Homo_sapiens
ENSELUG00000008382	sbds	99	91.165	ENSAPOG00000014285	sbds	100	91.165	Acanthochromis_polyacanthus
ENSELUG00000008382	sbds	100	82.000	ENSAMEG00000018167	SBDS	100	82.000	Ailuropoda_melanoleuca
ENSELUG00000008382	sbds	99	90.079	ENSACIG00000007308	sbds	100	90.079	Amphilophus_citrinellus
ENSELUG00000008382	sbds	99	91.566	ENSAOCG00000016770	sbds	100	91.566	Amphiprion_ocellaris
ENSELUG00000008382	sbds	99	91.566	ENSAPEG00000015897	sbds	100	91.566	Amphiprion_percula
ENSELUG00000008382	sbds	99	90.763	ENSATEG00000006901	sbds	100	90.763	Anabas_testudineus
ENSELUG00000008382	sbds	83	80.676	ENSANAG00000037501	-	100	80.676	Aotus_nancymaae
ENSELUG00000008382	sbds	92	76.190	ENSANAG00000024342	-	95	78.313	Aotus_nancymaae
ENSELUG00000008382	sbds	99	91.968	ENSACLG00000018750	sbds	100	91.968	Astatotilapia_calliptera
ENSELUG00000008382	sbds	100	88.800	ENSAMXG00000005361	sbds	100	88.800	Astyanax_mexicanus
ENSELUG00000008382	sbds	100	82.800	ENSBTAG00000004051	SBDS	100	82.800	Bos_taurus
ENSELUG00000008382	sbds	98	56.098	WBGene00021063	sbds-1	97	56.098	Caenorhabditis_elegans
ENSELUG00000008382	sbds	100	82.400	ENSCJAG00000041007	SBDS	100	82.400	Callithrix_jacchus
ENSELUG00000008382	sbds	100	80.159	ENSCAFG00000010797	SBDS	100	80.159	Canis_familiaris
ENSELUG00000008382	sbds	100	82.000	ENSCAFG00020005357	SBDS	100	82.000	Canis_lupus_dingo
ENSELUG00000008382	sbds	100	82.400	ENSCHIG00000026854	SBDS	100	82.400	Capra_hircus
ENSELUG00000008382	sbds	100	82.000	ENSTSYG00000033822	SBDS	100	82.000	Carlito_syrichta
ENSELUG00000008382	sbds	66	81.098	ENSCAPG00000006634	SBDS	100	81.098	Cavia_aperea
ENSELUG00000008382	sbds	100	83.200	ENSCPOG00000036143	SBDS	100	83.200	Cavia_porcellus
ENSELUG00000008382	sbds	100	82.000	ENSCCAG00000020671	SBDS	100	82.000	Cebus_capucinus
ENSELUG00000008382	sbds	100	82.000	ENSCATG00000039026	SBDS	100	82.000	Cercocebus_atys
ENSELUG00000008382	sbds	99	58.871	ENSCLAG00000002113	-	99	58.871	Chinchilla_lanigera
ENSELUG00000008382	sbds	100	83.600	ENSCLAG00000005721	-	100	83.600	Chinchilla_lanigera
ENSELUG00000008382	sbds	100	82.000	ENSCSAG00000018275	SBDS	100	82.000	Chlorocebus_sabaeus
ENSELUG00000008382	sbds	100	77.200	ENSCHOG00000003795	SBDS	100	77.200	Choloepus_hoffmanni
ENSELUG00000008382	sbds	100	84.400	ENSCPBG00000014893	SBDS	100	84.400	Chrysemys_picta_bellii
ENSELUG00000008382	sbds	99	67.742	ENSCSAVG00000011811	-	99	67.742	Ciona_savignyi
ENSELUG00000008382	sbds	100	81.600	ENSCANG00000032368	SBDS	100	81.600	Colobus_angolensis_palliatus
ENSELUG00000008382	sbds	66	79.878	ENSCGRG00001019886	Sbds	100	79.878	Cricetulus_griseus_chok1gshd
ENSELUG00000008382	sbds	83	81.159	ENSCGRG00000009211	Sbds	100	81.159	Cricetulus_griseus_crigri
ENSELUG00000008382	sbds	99	90.361	ENSCSEG00000005798	sbds	100	90.361	Cynoglossus_semilaevis
ENSELUG00000008382	sbds	99	89.157	ENSCVAG00000001053	sbds	100	89.157	Cyprinodon_variegatus
ENSELUG00000008382	sbds	100	89.600	ENSDARG00000027803	sbds	100	89.600	Danio_rerio
ENSELUG00000008382	sbds	100	82.000	ENSDNOG00000041174	SBDS	100	82.000	Dasypus_novemcinctus
ENSELUG00000008382	sbds	100	82.800	ENSDORG00000026218	Sbds	100	82.800	Dipodomys_ordii
ENSELUG00000008382	sbds	90	61.842	FBgn0035714	CG8549	98	61.943	Drosophila_melanogaster
ENSELUG00000008382	sbds	93	59.227	ENSEBUG00000015780	sbds	100	59.227	Eptatretus_burgeri
ENSELUG00000008382	sbds	100	82.000	ENSEASG00005008821	SBDS	100	82.000	Equus_asinus_asinus
ENSELUG00000008382	sbds	100	82.000	ENSECAG00000008202	SBDS	100	82.000	Equus_caballus
ENSELUG00000008382	sbds	83	62.981	ENSEEUG00000004768	SBDS	100	62.981	Erinaceus_europaeus
ENSELUG00000008382	sbds	100	82.000	ENSFCAG00000022142	SBDS	100	82.000	Felis_catus
ENSELUG00000008382	sbds	100	84.800	ENSFALG00000013808	SBDS	100	84.800	Ficedula_albicollis
ENSELUG00000008382	sbds	100	83.200	ENSFDAG00000018947	-	100	83.200	Fukomys_damarensis
ENSELUG00000008382	sbds	99	86.345	ENSFHEG00000000708	sbds	100	86.345	Fundulus_heteroclitus
ENSELUG00000008382	sbds	100	88.400	ENSGMOG00000018356	sbds	99	88.400	Gadus_morhua
ENSELUG00000008382	sbds	100	83.200	ENSGALG00000027989	SBDS	100	83.200	Gallus_gallus
ENSELUG00000008382	sbds	92	85.217	ENSGAFG00000014204	sbds	100	85.217	Gambusia_affinis
ENSELUG00000008382	sbds	99	87.149	ENSGACG00000012697	sbds	100	87.149	Gasterosteus_aculeatus
ENSELUG00000008382	sbds	86	84.579	ENSGAGG00000022402	SBDS	100	84.579	Gopherus_agassizii
ENSELUG00000008382	sbds	96	63.900	ENSGGOG00000040023	-	92	63.900	Gorilla_gorilla
ENSELUG00000008382	sbds	99	91.968	ENSHBUG00000002660	sbds	100	91.968	Haplochromis_burtoni
ENSELUG00000008382	sbds	100	81.600	ENSHGLG00000009671	SBDS	100	81.600	Heterocephalus_glaber_female
ENSELUG00000008382	sbds	100	81.600	ENSHGLG00100011332	SBDS	100	81.600	Heterocephalus_glaber_male
ENSELUG00000008382	sbds	99	85.944	ENSHCOG00000018606	sbds	100	85.944	Hippocampus_comes
ENSELUG00000008382	sbds	100	89.200	ENSIPUG00000006536	sbds	100	89.200	Ictalurus_punctatus
ENSELUG00000008382	sbds	100	80.000	ENSJJAG00000012033	-	100	80.000	Jaculus_jaculus
ENSELUG00000008382	sbds	100	59.684	ENSJJAG00000003934	-	100	59.684	Jaculus_jaculus
ENSELUG00000008382	sbds	99	89.157	ENSKMAG00000018542	sbds	100	89.157	Kryptolebias_marmoratus
ENSELUG00000008382	sbds	99	89.157	ENSLBEG00000016687	sbds	100	89.157	Labrus_bergylta
ENSELUG00000008382	sbds	100	74.603	ENSLACG00000018916	SBDS	100	74.603	Latimeria_chalumnae
ENSELUG00000008382	sbds	100	89.600	ENSLOCG00000004073	sbds	100	89.600	Lepisosteus_oculatus
ENSELUG00000008382	sbds	100	82.400	ENSLAFG00000008763	SBDS	100	82.400	Loxodonta_africana
ENSELUG00000008382	sbds	100	82.000	ENSMFAG00000032620	SBDS	100	82.000	Macaca_fascicularis
ENSELUG00000008382	sbds	100	82.000	ENSMMUG00000045653	SBDS	100	82.000	Macaca_mulatta
ENSELUG00000008382	sbds	100	82.000	ENSMNEG00000031523	SBDS	100	82.000	Macaca_nemestrina
ENSELUG00000008382	sbds	100	64.567	ENSMLEG00000036826	SBDS	100	64.567	Mandrillus_leucophaeus
ENSELUG00000008382	sbds	99	90.361	ENSMAMG00000016062	sbds	100	90.361	Mastacembelus_armatus
ENSELUG00000008382	sbds	99	91.968	ENSMZEG00005024385	sbds	100	91.968	Maylandia_zebra
ENSELUG00000008382	sbds	100	83.200	ENSMGAG00000002119	SBDS	100	83.200	Meleagris_gallopavo
ENSELUG00000008382	sbds	99	66.667	ENSMAUG00000022214	-	100	66.667	Mesocricetus_auratus
ENSELUG00000008382	sbds	100	82.400	ENSMICG00000014366	SBDS	100	82.400	Microcebus_murinus
ENSELUG00000008382	sbds	100	82.000	ENSMOCG00000011739	Sbds	100	82.000	Microtus_ochrogaster
ENSELUG00000008382	sbds	99	82.800	ENSMMOG00000005061	sbds	100	82.400	Mola_mola
ENSELUG00000008382	sbds	100	83.600	ENSMODG00000006644	SBDS	100	83.600	Monodelphis_domestica
ENSELUG00000008382	sbds	99	85.944	ENSMALG00000010219	sbds	100	85.944	Monopterus_albus
ENSELUG00000008382	sbds	100	82.800	MGP_CAROLIEiJ_G0027800	Sbds	98	92.857	Mus_caroli
ENSELUG00000008382	sbds	100	82.400	ENSMUSG00000025337	Sbds	98	92.857	Mus_musculus
ENSELUG00000008382	sbds	100	82.800	MGP_PahariEiJ_G0024384	Sbds	98	92.857	Mus_pahari
ENSELUG00000008382	sbds	100	82.400	MGP_SPRETEiJ_G0028798	Sbds	98	92.857	Mus_spretus
ENSELUG00000008382	sbds	67	80.952	ENSMPUG00000016192	SBDS	97	80.952	Mustela_putorius_furo
ENSELUG00000008382	sbds	73	78.022	ENSMLUG00000013575	SBDS	100	78.022	Myotis_lucifugus
ENSELUG00000008382	sbds	100	82.800	ENSNGAG00000012093	Sbds	100	82.800	Nannospalax_galili
ENSELUG00000008382	sbds	99	91.968	ENSNBRG00000017027	sbds	100	91.968	Neolamprologus_brichardi
ENSELUG00000008382	sbds	100	82.000	ENSNLEG00000013288	SBDS	100	82.000	Nomascus_leucogenys
ENSELUG00000008382	sbds	100	82.000	ENSOPRG00000008721	SBDS	100	82.000	Ochotona_princeps
ENSELUG00000008382	sbds	99	64.659	ENSODEG00000000137	-	84	67.871	Octodon_degus
ENSELUG00000008382	sbds	99	64.659	ENSODEG00000001116	-	99	64.659	Octodon_degus
ENSELUG00000008382	sbds	100	76.000	ENSODEG00000019253	-	84	76.000	Octodon_degus
ENSELUG00000008382	sbds	99	91.968	ENSONIG00000005874	sbds	100	91.968	Oreochromis_niloticus
ENSELUG00000008382	sbds	83	81.159	ENSOANG00000007674	-	100	81.159	Ornithorhynchus_anatinus
ENSELUG00000008382	sbds	100	83.600	ENSOCUG00000003170	SBDS	100	83.600	Oryctolagus_cuniculus
ENSELUG00000008382	sbds	99	86.345	ENSORLG00000023489	sbds	100	86.345	Oryzias_latipes
ENSELUG00000008382	sbds	99	85.944	ENSORLG00020019282	sbds	100	85.944	Oryzias_latipes_hni
ENSELUG00000008382	sbds	99	85.944	ENSORLG00015008005	sbds	100	85.944	Oryzias_latipes_hsok
ENSELUG00000008382	sbds	99	86.747	ENSOMEG00000022747	sbds	100	86.747	Oryzias_melastigma
ENSELUG00000008382	sbds	100	70.800	ENSOGAG00000015036	-	100	70.800	Otolemur_garnettii
ENSELUG00000008382	sbds	100	82.800	ENSOGAG00000009011	-	100	82.800	Otolemur_garnettii
ENSELUG00000008382	sbds	100	82.400	ENSOARG00000010609	SBDS	100	82.400	Ovis_aries
ENSELUG00000008382	sbds	100	81.200	ENSPPAG00000043889	-	100	81.200	Pan_paniscus
ENSELUG00000008382	sbds	100	82.000	ENSPPRG00000002307	SBDS	100	82.000	Panthera_pardus
ENSELUG00000008382	sbds	100	82.000	ENSPTIG00000021308	SBDS	100	82.000	Panthera_tigris_altaica
ENSELUG00000008382	sbds	100	69.200	ENSPTRG00000047744	-	100	69.200	Pan_troglodytes
ENSELUG00000008382	sbds	84	82.297	ENSPTRG00000048174	-	93	82.297	Pan_troglodytes
ENSELUG00000008382	sbds	100	82.000	ENSPTRG00000019254	SBDS	100	82.000	Pan_troglodytes
ENSELUG00000008382	sbds	100	69.200	ENSPTRG00000050835	-	100	69.200	Pan_troglodytes
ENSELUG00000008382	sbds	100	82.000	ENSPANG00000004078	SBDS	100	82.000	Papio_anubis
ENSELUG00000008382	sbds	100	89.600	ENSPKIG00000006489	sbds	100	89.600	Paramormyrops_kingsleyae
ENSELUG00000008382	sbds	83	83.654	ENSPSIG00000014603	SBDS	100	83.654	Pelodiscus_sinensis
ENSELUG00000008382	sbds	99	90.763	ENSPMGG00000004246	sbds	100	90.763	Periophthalmus_magnuspinnatus
ENSELUG00000008382	sbds	100	82.800	ENSPEMG00000008728	Sbds	100	82.800	Peromyscus_maniculatus_bairdii
ENSELUG00000008382	sbds	100	84.000	ENSPCIG00000029718	SBDS	100	84.000	Phascolarctos_cinereus
ENSELUG00000008382	sbds	99	87.149	ENSPFOG00000015837	sbds	100	87.149	Poecilia_formosa
ENSELUG00000008382	sbds	99	87.550	ENSPLAG00000003641	sbds	100	87.550	Poecilia_latipinna
ENSELUG00000008382	sbds	99	87.149	ENSPMEG00000019483	sbds	100	87.149	Poecilia_mexicana
ENSELUG00000008382	sbds	99	87.149	ENSPREG00000018758	sbds	100	87.149	Poecilia_reticulata
ENSELUG00000008382	sbds	100	82.000	ENSPPYG00000017513	SBDS	100	82.000	Pongo_abelii
ENSELUG00000008382	sbds	100	82.400	ENSPCOG00000021098	SBDS	100	82.400	Propithecus_coquereli
ENSELUG00000008382	sbds	100	82.400	ENSPVAG00000009369	SBDS	100	82.400	Pteropus_vampyrus
ENSELUG00000008382	sbds	99	91.566	ENSPNYG00000022403	sbds	100	91.566	Pundamilia_nyererei
ENSELUG00000008382	sbds	100	91.600	ENSPNAG00000001120	sbds	100	91.600	Pygocentrus_nattereri
ENSELUG00000008382	sbds	100	82.800	ENSRNOG00000000888	Sbds	100	82.800	Rattus_norvegicus
ENSELUG00000008382	sbds	100	82.000	ENSRBIG00000035557	SBDS	100	82.000	Rhinopithecus_bieti
ENSELUG00000008382	sbds	100	82.000	ENSRROG00000040842	-	100	82.000	Rhinopithecus_roxellana
ENSELUG00000008382	sbds	100	67.200	ENSRROG00000041986	-	100	67.200	Rhinopithecus_roxellana
ENSELUG00000008382	sbds	96	43.496	YLR022C	-	96	43.496	Saccharomyces_cerevisiae
ENSELUG00000008382	sbds	93	79.741	ENSSBOG00000022460	SBDS	100	79.741	Saimiri_boliviensis_boliviensis
ENSELUG00000008382	sbds	100	72.000	ENSSHAG00000010263	SBDS	100	72.000	Sarcophilus_harrisii
ENSELUG00000008382	sbds	100	89.600	ENSSFOG00015001108	sbds	100	89.600	Scleropages_formosus
ENSELUG00000008382	sbds	99	89.960	ENSSMAG00000020506	sbds	100	89.960	Scophthalmus_maximus
ENSELUG00000008382	sbds	99	90.361	ENSSDUG00000001528	sbds	100	90.361	Seriola_dumerili
ENSELUG00000008382	sbds	99	89.960	ENSSLDG00000003659	sbds	100	89.960	Seriola_lalandi_dorsalis
ENSELUG00000008382	sbds	73	88.372	ENSSARG00000001899	-	73	88.372	Sorex_araneus
ENSELUG00000008382	sbds	61	86.275	ENSSARG00000013132	-	100	86.275	Sorex_araneus
ENSELUG00000008382	sbds	100	82.400	ENSSPUG00000002699	SBDS	100	82.400	Sphenodon_punctatus
ENSELUG00000008382	sbds	99	91.566	ENSSPAG00000016419	sbds	100	84.337	Stegastes_partitus
ENSELUG00000008382	sbds	100	82.400	ENSSSCG00000007732	SBDS	100	82.400	Sus_scrofa
ENSELUG00000008382	sbds	66	84.848	ENSTGUG00000003426	SBDS	99	84.848	Taeniopygia_guttata
ENSELUG00000008382	sbds	99	89.157	ENSTRUG00000021443	sbds	100	89.157	Takifugu_rubripes
ENSELUG00000008382	sbds	99	89.157	ENSTNIG00000019000	sbds	100	89.157	Tetraodon_nigroviridis
ENSELUG00000008382	sbds	83	69.712	ENSTBEG00000001178	SBDS	100	69.712	Tupaia_belangeri
ENSELUG00000008382	sbds	100	64.800	ENSTTRG00000003921	SBDS	100	64.800	Tursiops_truncatus
ENSELUG00000008382	sbds	100	82.000	ENSUAMG00000001326	SBDS	100	82.000	Ursus_americanus
ENSELUG00000008382	sbds	100	82.000	ENSUMAG00000015353	SBDS	100	82.000	Ursus_maritimus
ENSELUG00000008382	sbds	100	82.000	ENSVVUG00000016478	SBDS	100	82.000	Vulpes_vulpes
ENSELUG00000008382	sbds	100	84.400	ENSXETG00000010093	sbds	100	84.400	Xenopus_tropicalis
ENSELUG00000008382	sbds	99	78.715	ENSXCOG00000010639	sbds	100	78.715	Xiphophorus_couchianus
ENSELUG00000008382	sbds	99	87.550	ENSXMAG00000006065	sbds	100	87.550	Xiphophorus_maculatus