EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000008442 (Gene tree)
Gene ID: 105017560
Gene Symbol: cpsf2
Alias: zgc:92484
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 13012 bases
Position: chrLG18:9178882-9191893
Accession: 105017560
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000007645	Beta-Casp	PF10996.8	6.5e-20	1	1
ENSELUP00000030996	Beta-Casp	PF10996.8	6.9e-20	1	1
ENSELUP00000030996	Lactamase_B	PF00753.27	1.5e-05	1	1
ENSELUP00000007645	Lactamase_B	PF00753.27	1.6e-05	1	1
ENSELUP00000030996	RMMBL	PF07521.12	8.1e-15	1	1
ENSELUP00000007645	RMMBL	PF07521.12	8.2e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000006912	-	2400	-	ENSELUP00000007645	799 (aa)	-	-
ENSELUT00000006882	-	5181	XM_010882255	ENSELUP00000030996	796 (aa)	XP_010880557	UPI0005762A52

Gene Model

Click here to download ENSELUG00000008442's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000008442's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000008442	cpsf2	100	83.940	ENSG00000165934	CPSF2	100	88.750	Homo_sapiens
ENSELUG00000008442	cpsf2	100	90.100	ENSAPOG00000001242	cpsf2	100	90.100	Acanthochromis_polyacanthus
ENSELUG00000008442	cpsf2	100	89.210	ENSACIG00000009331	cpsf2	100	89.210	Amphilophus_citrinellus
ENSELUG00000008442	cpsf2	100	89.698	ENSAOCG00000014095	cpsf2	100	89.698	Amphiprion_ocellaris
ENSELUG00000008442	cpsf2	100	89.698	ENSAPEG00000009158	cpsf2	100	89.698	Amphiprion_percula
ENSELUG00000008442	cpsf2	96	89.048	ENSATEG00000017644	cpsf2	99	87.273	Anabas_testudineus
ENSELUG00000008442	cpsf2	100	83.980	ENSAPLG00000006330	CPSF2	100	83.980	Anas_platyrhynchos
ENSELUG00000008442	cpsf2	100	84.316	ENSACAG00000009245	CPSF2	100	84.316	Anolis_carolinensis
ENSELUG00000008442	cpsf2	100	84.065	ENSANAG00000022915	CPSF2	100	84.065	Aotus_nancymaae
ENSELUG00000008442	cpsf2	100	89.586	ENSAMXG00000018696	cpsf2	100	89.586	Astyanax_mexicanus
ENSELUG00000008442	cpsf2	100	84.191	ENSBTAG00000010227	CPSF2	100	84.191	Bos_taurus
ENSELUG00000008442	cpsf2	100	42.093	WBGene00017313	cpsf-2	100	42.136	Caenorhabditis_elegans
ENSELUG00000008442	cpsf2	100	84.065	ENSCJAG00000018069	CPSF2	100	84.065	Callithrix_jacchus
ENSELUG00000008442	cpsf2	100	83.940	ENSCAFG00000010909	CPSF2	100	83.940	Canis_familiaris
ENSELUG00000008442	cpsf2	100	83.940	ENSCAFG00020020670	CPSF2	100	83.940	Canis_lupus_dingo
ENSELUG00000008442	cpsf2	100	84.191	ENSCHIG00000023848	CPSF2	100	84.191	Capra_hircus
ENSELUG00000008442	cpsf2	100	84.065	ENSTSYG00000009036	CPSF2	100	84.065	Carlito_syrichta
ENSELUG00000008442	cpsf2	100	84.065	ENSCPOG00000010899	CPSF2	100	84.065	Cavia_porcellus
ENSELUG00000008442	cpsf2	100	84.065	ENSCCAG00000028088	CPSF2	100	84.065	Cebus_capucinus
ENSELUG00000008442	cpsf2	100	84.065	ENSCATG00000030132	CPSF2	100	84.065	Cercocebus_atys
ENSELUG00000008442	cpsf2	100	84.065	ENSCLAG00000012404	CPSF2	100	84.065	Chinchilla_lanigera
ENSELUG00000008442	cpsf2	100	84.065	ENSCSAG00000011300	CPSF2	100	84.065	Chlorocebus_sabaeus
ENSELUG00000008442	cpsf2	100	78.921	ENSCHOG00000012904	CPSF2	100	78.921	Choloepus_hoffmanni
ENSELUG00000008442	cpsf2	100	84.944	ENSCPBG00000008766	CPSF2	97	84.944	Chrysemys_picta_bellii
ENSELUG00000008442	cpsf2	100	53.506	ENSCING00000007881	-	100	53.506	Ciona_intestinalis
ENSELUG00000008442	cpsf2	94	83.957	ENSCANG00000041651	CPSF2	100	83.936	Colobus_angolensis_palliatus
ENSELUG00000008442	cpsf2	100	84.191	ENSCGRG00001006901	Cpsf2	100	84.191	Cricetulus_griseus_chok1gshd
ENSELUG00000008442	cpsf2	100	84.191	ENSCGRG00000012416	Cpsf2	100	84.191	Cricetulus_griseus_crigri
ENSELUG00000008442	cpsf2	100	88.972	ENSCSEG00000004116	cpsf2	100	88.972	Cynoglossus_semilaevis
ENSELUG00000008442	cpsf2	100	88.442	ENSCVAG00000000095	cpsf2	100	88.568	Cyprinodon_variegatus
ENSELUG00000008442	cpsf2	100	87.453	ENSDARG00000028971	cpsf2	100	87.453	Danio_rerio
ENSELUG00000008442	cpsf2	100	84.191	ENSDNOG00000042757	CPSF2	100	84.191	Dasypus_novemcinctus
ENSELUG00000008442	cpsf2	100	84.065	ENSDORG00000013709	Cpsf2	100	84.065	Dipodomys_ordii
ENSELUG00000008442	cpsf2	100	53.686	FBgn0027873	Cpsf100	100	53.931	Drosophila_melanogaster
ENSELUG00000008442	cpsf2	100	76.566	ENSETEG00000012123	CPSF2	100	76.566	Echinops_telfairi
ENSELUG00000008442	cpsf2	52	77.317	ENSEBUG00000012098	cpsf2	93	77.317	Eptatretus_burgeri
ENSELUG00000008442	cpsf2	92	91.468	ENSEASG00005021193	CPSF2	100	91.468	Equus_asinus_asinus
ENSELUG00000008442	cpsf2	100	83.940	ENSECAG00000023935	CPSF2	100	83.940	Equus_caballus
ENSELUG00000008442	cpsf2	100	83.940	ENSFCAG00000007886	CPSF2	100	83.940	Felis_catus
ENSELUG00000008442	cpsf2	100	84.442	ENSFALG00000002412	CPSF2	100	84.442	Ficedula_albicollis
ENSELUG00000008442	cpsf2	100	83.940	ENSFDAG00000006327	CPSF2	100	83.940	Fukomys_damarensis
ENSELUG00000008442	cpsf2	96	88.166	ENSFHEG00000015465	cpsf2	98	88.527	Fundulus_heteroclitus
ENSELUG00000008442	cpsf2	100	88.346	ENSGMOG00000008761	cpsf2	100	88.346	Gadus_morhua
ENSELUG00000008442	cpsf2	100	84.065	ENSGALG00000010783	CPSF2	100	84.818	Gallus_gallus
ENSELUG00000008442	cpsf2	100	88.945	ENSGAFG00000001407	cpsf2	100	88.945	Gambusia_affinis
ENSELUG00000008442	cpsf2	100	89.573	ENSGACG00000008418	cpsf2	100	89.573	Gasterosteus_aculeatus
ENSELUG00000008442	cpsf2	100	84.818	ENSGAGG00000008287	CPSF2	100	84.818	Gopherus_agassizii
ENSELUG00000008442	cpsf2	100	83.940	ENSGGOG00000011799	CPSF2	100	83.940	Gorilla_gorilla
ENSELUG00000008442	cpsf2	100	88.191	ENSHBUG00000023466	cpsf2	100	88.191	Haplochromis_burtoni
ENSELUG00000008442	cpsf2	100	84.065	ENSHGLG00000018311	CPSF2	100	84.065	Heterocephalus_glaber_female
ENSELUG00000008442	cpsf2	100	84.065	ENSHGLG00100016460	CPSF2	100	84.065	Heterocephalus_glaber_male
ENSELUG00000008442	cpsf2	100	87.970	ENSHCOG00000019527	cpsf2	98	87.970	Hippocampus_comes
ENSELUG00000008442	cpsf2	100	89.084	ENSIPUG00000020857	cpsf2	100	89.084	Ictalurus_punctatus
ENSELUG00000008442	cpsf2	100	84.065	ENSSTOG00000009528	CPSF2	100	84.065	Ictidomys_tridecemlineatus
ENSELUG00000008442	cpsf2	100	84.065	ENSJJAG00000017925	Cpsf2	100	84.065	Jaculus_jaculus
ENSELUG00000008442	cpsf2	100	88.191	ENSKMAG00000019429	cpsf2	100	88.191	Kryptolebias_marmoratus
ENSELUG00000008442	cpsf2	95	88.639	ENSLBEG00000011585	cpsf2	100	88.771	Labrus_bergylta
ENSELUG00000008442	cpsf2	100	82.434	ENSLACG00000019024	CPSF2	100	83.438	Latimeria_chalumnae
ENSELUG00000008442	cpsf2	100	88.346	ENSLOCG00000014102	cpsf2	100	88.346	Lepisosteus_oculatus
ENSELUG00000008442	cpsf2	100	83.730	ENSLAFG00000004891	CPSF2	100	83.730	Loxodonta_africana
ENSELUG00000008442	cpsf2	100	84.065	ENSMFAG00000041212	CPSF2	100	84.065	Macaca_fascicularis
ENSELUG00000008442	cpsf2	100	84.065	ENSMMUG00000000699	CPSF2	100	84.065	Macaca_mulatta
ENSELUG00000008442	cpsf2	100	84.065	ENSMNEG00000031584	CPSF2	100	84.065	Macaca_nemestrina
ENSELUG00000008442	cpsf2	100	84.065	ENSMLEG00000029394	CPSF2	100	84.065	Mandrillus_leucophaeus
ENSELUG00000008442	cpsf2	100	89.223	ENSMAMG00000004235	cpsf2	100	89.223	Mastacembelus_armatus
ENSELUG00000008442	cpsf2	100	88.317	ENSMZEG00005001769	cpsf2	100	88.317	Maylandia_zebra
ENSELUG00000008442	cpsf2	100	83.835	ENSMGAG00000013122	CPSF2	100	84.586	Meleagris_gallopavo
ENSELUG00000008442	cpsf2	100	84.191	ENSMAUG00000015160	Cpsf2	100	84.191	Mesocricetus_auratus
ENSELUG00000008442	cpsf2	100	84.065	ENSMICG00000016441	CPSF2	100	84.065	Microcebus_murinus
ENSELUG00000008442	cpsf2	100	83.940	ENSMOCG00000015372	Cpsf2	100	83.940	Microtus_ochrogaster
ENSELUG00000008442	cpsf2	100	84.211	ENSMMOG00000015590	cpsf2	100	84.211	Mola_mola
ENSELUG00000008442	cpsf2	100	84.567	ENSMODG00000002042	CPSF2	100	84.567	Monodelphis_domestica
ENSELUG00000008442	cpsf2	100	86.181	ENSMALG00000022275	cpsf2	100	86.181	Monopterus_albus
ENSELUG00000008442	cpsf2	100	83.814	ENSMUSG00000041781	Cpsf2	100	83.814	Mus_musculus
ENSELUG00000008442	cpsf2	100	83.689	MGP_PahariEiJ_G0029791	Cpsf2	100	83.689	Mus_pahari
ENSELUG00000008442	cpsf2	100	83.814	MGP_SPRETEiJ_G0018877	Cpsf2	100	83.814	Mus_spretus
ENSELUG00000008442	cpsf2	100	83.940	ENSMPUG00000007617	CPSF2	98	83.940	Mustela_putorius_furo
ENSELUG00000008442	cpsf2	100	84.191	ENSMLUG00000005570	CPSF2	100	84.191	Myotis_lucifugus
ENSELUG00000008442	cpsf2	100	83.940	ENSNGAG00000020312	Cpsf2	100	83.940	Nannospalax_galili
ENSELUG00000008442	cpsf2	100	88.568	ENSNBRG00000022402	cpsf2	100	88.568	Neolamprologus_brichardi
ENSELUG00000008442	cpsf2	100	83.312	ENSNLEG00000017132	CPSF2	100	83.312	Nomascus_leucogenys
ENSELUG00000008442	cpsf2	91	94.498	ENSMEUG00000008138	CPSF2	91	94.498	Notamacropus_eugenii
ENSELUG00000008442	cpsf2	85	88.099	ENSOPRG00000008484	-	93	88.099	Ochotona_princeps
ENSELUG00000008442	cpsf2	100	83.814	ENSODEG00000008682	CPSF2	100	83.814	Octodon_degus
ENSELUG00000008442	cpsf2	100	88.945	ENSONIG00000005901	cpsf2	100	88.945	Oreochromis_niloticus
ENSELUG00000008442	cpsf2	100	84.567	ENSOANG00000003822	CPSF2	100	84.567	Ornithorhynchus_anatinus
ENSELUG00000008442	cpsf2	100	84.065	ENSOCUG00000005713	CPSF2	100	84.065	Oryctolagus_cuniculus
ENSELUG00000008442	cpsf2	100	82.412	ENSORLG00000011628	cpsf2	100	82.412	Oryzias_latipes
ENSELUG00000008442	cpsf2	100	87.940	ENSORLG00020016980	cpsf2	100	87.940	Oryzias_latipes_hni
ENSELUG00000008442	cpsf2	100	87.940	ENSORLG00015011910	cpsf2	100	87.940	Oryzias_latipes_hsok
ENSELUG00000008442	cpsf2	100	88.191	ENSOMEG00000022876	cpsf2	100	88.191	Oryzias_melastigma
ENSELUG00000008442	cpsf2	100	81.227	ENSOARG00000012889	CPSF2	100	81.227	Ovis_aries
ENSELUG00000008442	cpsf2	100	83.940	ENSPPAG00000039666	CPSF2	100	83.940	Pan_paniscus
ENSELUG00000008442	cpsf2	99	83.920	ENSPPRG00000010869	CPSF2	100	83.920	Panthera_pardus
ENSELUG00000008442	cpsf2	100	83.940	ENSPTIG00000021202	CPSF2	100	83.940	Panthera_tigris_altaica
ENSELUG00000008442	cpsf2	100	83.940	ENSPTRG00000006651	CPSF2	100	83.940	Pan_troglodytes
ENSELUG00000008442	cpsf2	100	84.065	ENSPANG00000017417	CPSF2	100	84.065	Papio_anubis
ENSELUG00000008442	cpsf2	100	85.069	ENSPKIG00000021453	cpsf2	100	85.069	Paramormyrops_kingsleyae
ENSELUG00000008442	cpsf2	100	84.567	ENSPSIG00000006289	CPSF2	100	84.567	Pelodiscus_sinensis
ENSELUG00000008442	cpsf2	76	85.033	ENSPMGG00000002511	cpsf2	99	85.033	Periophthalmus_magnuspinnatus
ENSELUG00000008442	cpsf2	100	84.065	ENSPEMG00000007917	Cpsf2	100	84.065	Peromyscus_maniculatus_bairdii
ENSELUG00000008442	cpsf2	100	71.960	ENSPMAG00000006205	cpsf2	100	72.773	Petromyzon_marinus
ENSELUG00000008442	cpsf2	100	84.567	ENSPCIG00000011393	CPSF2	100	84.567	Phascolarctos_cinereus
ENSELUG00000008442	cpsf2	100	89.196	ENSPFOG00000018648	cpsf2	100	89.196	Poecilia_formosa
ENSELUG00000008442	cpsf2	100	89.196	ENSPLAG00000019199	cpsf2	99	89.196	Poecilia_latipinna
ENSELUG00000008442	cpsf2	96	89.048	ENSPMEG00000012100	cpsf2	100	88.742	Poecilia_mexicana
ENSELUG00000008442	cpsf2	100	88.945	ENSPREG00000008960	cpsf2	100	88.945	Poecilia_reticulata
ENSELUG00000008442	cpsf2	64	78.474	ENSPPYG00000029685	-	100	78.474	Pongo_abelii
ENSELUG00000008442	cpsf2	100	83.940	ENSPCAG00000012477	CPSF2	100	83.940	Procavia_capensis
ENSELUG00000008442	cpsf2	100	84.191	ENSPCOG00000026387	CPSF2	100	84.191	Propithecus_coquereli
ENSELUG00000008442	cpsf2	64	91.327	ENSPVAG00000004223	CPSF2	65	91.327	Pteropus_vampyrus
ENSELUG00000008442	cpsf2	100	88.206	ENSPNYG00000023356	cpsf2	100	88.206	Pundamilia_nyererei
ENSELUG00000008442	cpsf2	100	90.464	ENSPNAG00000001849	cpsf2	100	90.464	Pygocentrus_nattereri
ENSELUG00000008442	cpsf2	100	83.814	ENSRNOG00000005733	Cpsf2	100	83.814	Rattus_norvegicus
ENSELUG00000008442	cpsf2	100	84.065	ENSRBIG00000044792	CPSF2	100	84.065	Rhinopithecus_bieti
ENSELUG00000008442	cpsf2	100	84.065	ENSRROG00000034875	CPSF2	100	84.065	Rhinopithecus_roxellana
ENSELUG00000008442	cpsf2	100	84.065	ENSSBOG00000024571	CPSF2	100	84.065	Saimiri_boliviensis_boliviensis
ENSELUG00000008442	cpsf2	100	84.316	ENSSHAG00000010458	CPSF2	100	84.316	Sarcophilus_harrisii
ENSELUG00000008442	cpsf2	100	90.339	ENSSFOG00015002117	cpsf2	100	90.339	Scleropages_formosus
ENSELUG00000008442	cpsf2	100	89.322	ENSSMAG00000002001	cpsf2	100	89.698	Scophthalmus_maximus
ENSELUG00000008442	cpsf2	100	90.100	ENSSDUG00000004084	cpsf2	100	90.100	Seriola_dumerili
ENSELUG00000008442	cpsf2	100	89.599	ENSSLDG00000024330	cpsf2	100	89.599	Seriola_lalandi_dorsalis
ENSELUG00000008442	cpsf2	57	96.040	ENSSARG00000009784	-	63	96.040	Sorex_araneus
ENSELUG00000008442	cpsf2	100	84.567	ENSSPUG00000013485	CPSF2	100	84.567	Sphenodon_punctatus
ENSELUG00000008442	cpsf2	100	89.447	ENSSPAG00000013284	cpsf2	100	89.447	Stegastes_partitus
ENSELUG00000008442	cpsf2	100	83.940	ENSSSCG00000002447	CPSF2	100	83.940	Sus_scrofa
ENSELUG00000008442	cpsf2	100	84.316	ENSTGUG00000012571	-	100	84.316	Taeniopygia_guttata
ENSELUG00000008442	cpsf2	100	88.693	ENSTRUG00000003742	cpsf2	100	88.693	Takifugu_rubripes
ENSELUG00000008442	cpsf2	100	87.970	ENSTNIG00000012228	cpsf2	100	87.970	Tetraodon_nigroviridis
ENSELUG00000008442	cpsf2	91	82.235	ENSTBEG00000004530	CPSF2	94	82.235	Tupaia_belangeri
ENSELUG00000008442	cpsf2	89	87.500	ENSTTRG00000008697	CPSF2	88	87.500	Tursiops_truncatus
ENSELUG00000008442	cpsf2	100	84.065	ENSUAMG00000028071	CPSF2	100	84.065	Ursus_americanus
ENSELUG00000008442	cpsf2	100	84.065	ENSUMAG00000005029	CPSF2	100	84.065	Ursus_maritimus
ENSELUG00000008442	cpsf2	99	84.045	ENSVPAG00000003503	CPSF2	100	84.045	Vicugna_pacos
ENSELUG00000008442	cpsf2	100	83.940	ENSVVUG00000024642	CPSF2	100	83.940	Vulpes_vulpes
ENSELUG00000008442	cpsf2	100	83.312	ENSXETG00000010289	cpsf2	100	83.312	Xenopus_tropicalis
ENSELUG00000008442	cpsf2	100	88.693	ENSXCOG00000001764	cpsf2	100	88.693	Xiphophorus_couchianus
ENSELUG00000008442	cpsf2	100	88.945	ENSXMAG00000017048	cpsf2	100	88.945	Xiphophorus_maculatus