EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000008588 (Gene tree)
Gene ID: 105028385
Gene Symbol: camk1b
Alias: -
Full Name: calcium/calmodulin-dependent protein kinase type 1
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 48349 bases
Position: chrLG17:23998989-24047337
Accession: 105028385
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000007833	RIO1	PF01163.22	0.00033	1	1
ENSELUP00000031134	RIO1	PF01163.22	0.00035	1	1
ENSELUP00000007849	RIO1	PF01163.22	0.00036	1	1
ENSELUP00000007856	RIO1	PF01163.22	0.00037	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000006597	-	1134	-	ENSELUP00000007833	377 (aa)	-	-
ENSELUT00000006569	-	3823	-	ENSELUP00000007849	394 (aa)	-	-
ENSELUT00000006535	-	2650	XM_010901097	ENSELUP00000031134	388 (aa)	XP_010899399	UPI0005765BA6
ENSELUT00000006555	-	2471	XM_010901096	ENSELUP00000007856	401 (aa)	XP_010899398	UPI000577DA78

Gene Model

Click here to download ENSELUG00000008588's gene model file

Pathways

Pathway ID	Pathway Name	Source
els04020	Calcium signaling pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000008588's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000008588	camk1b	66	33.333	ENSELUG00000019867	tssk6	96	32.955
ENSELUG00000008588	camk1b	79	37.188	ENSELUG00000003738	dapk2b	92	36.278
ENSELUG00000008588	camk1b	53	30.435	ENSELUG00000003613	uhmk1	66	30.769
ENSELUG00000008588	camk1b	68	41.697	ENSELUG00000000497	lsm7	54	41.697
ENSELUG00000008588	camk1b	50	31.188	ENSELUG00000020634	-	76	31.188

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000008588	camk1b	89	91.643	ENSCSEG00000004982	camk1b	98	91.643	Cynoglossus_semilaevis
ENSELUG00000008588	camk1b	65	97.154	ENSGMOG00000001841	-	100	97.154	Gadus_morhua
ENSELUG00000008588	camk1b	88	88.921	ENSGMOG00000016883	camk1a	100	88.921	Gadus_morhua
ENSELUG00000008588	camk1b	100	85.279	ENSPNAG00000002527	camk1b	100	84.314	Pygocentrus_nattereri
ENSELUG00000008588	camk1b	92	91.573	ENSSFOG00015019005	camk1	94	92.355	Scleropages_formosus
ENSELUG00000008588	camk1b	99	83.420	ENSSFOG00015021178	camk1a	92	91.988	Scleropages_formosus
ENSELUG00000008588	camk1b	100	81.186	ENSXETG00000023672	camk1	100	81.186	Xenopus_tropicalis