EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000008626 (Gene tree)
Gene ID: 105017883
Gene Symbol: LARP4B
Alias: KIAA0217|LARP5
Full Name: La ribonucleoprotein domain family member 4B
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 17772 bases
Position: chrLG03:26664482-26682253
Accession: 105017883
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000007892	La	PF05383.17	3.2e-13	1	1
ENSELUP00000031165	La	PF05383.17	3.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000006471	LARP4B-201	3144	XM_010882899	ENSELUP00000007892	763 (aa)	XP_010881201	UPI000576E0CF
ENSELUT00000006508	LARP4B-202	3014	XM_010882862	ENSELUP00000031165	770 (aa)	XP_010881164	UPI00057649A5

Gene Model

Click here to download ENSELUG00000008626's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000008626's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000008626	LARP4B	84	37.130	ENSELUG00000018650	larp4ab	93	36.485
ENSELUG00000008626	LARP4B	89	41.727	ENSELUG00000001417	-	94	42.158
ENSELUG00000008626	LARP4B	56	42.212	ENSELUG00000000395	larp4aa	74	40.161

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000008626	LARP4B	100	55.875	ENSG00000107929	LARP4B	100	55.500	Homo_sapiens
ENSELUG00000008626	LARP4B	100	60.448	ENSAPOG00000020531	LARP4B	95	75.078	Acanthochromis_polyacanthus
ENSELUG00000008626	LARP4B	93	57.086	ENSAMEG00000001810	LARP4B	100	55.404	Ailuropoda_melanoleuca
ENSELUG00000008626	LARP4B	98	61.727	ENSAOCG00000007887	-	99	68.976	Amphiprion_ocellaris
ENSELUG00000008626	LARP4B	92	74.266	ENSAPEG00000002512	LARP4B	96	72.583	Amphiprion_percula
ENSELUG00000008626	LARP4B	100	71.267	ENSATEG00000012614	LARP4B	100	71.142	Anabas_testudineus
ENSELUG00000008626	LARP4B	100	61.327	ENSAPLG00000003813	LARP4B	98	60.826	Anas_platyrhynchos
ENSELUG00000008626	LARP4B	100	60.825	ENSACAG00000002858	LARP4B	100	60.309	Anolis_carolinensis
ENSELUG00000008626	LARP4B	100	55.473	ENSANAG00000007531	-	100	55.224	Aotus_nancymaae
ENSELUG00000008626	LARP4B	100	71.357	ENSACLG00000026356	LARP4B	100	71.820	Astatotilapia_calliptera
ENSELUG00000008626	LARP4B	95	53.733	ENSAMXG00000003335	larp4b	97	53.183	Astyanax_mexicanus
ENSELUG00000008626	LARP4B	100	57.452	ENSBTAG00000013899	LARP4B	100	56.888	Bos_taurus
ENSELUG00000008626	LARP4B	100	55.348	ENSCJAG00000018434	LARP4B	100	54.795	Callithrix_jacchus
ENSELUG00000008626	LARP4B	94	57.540	ENSCAFG00020004209	LARP4B	100	56.305	Canis_lupus_dingo
ENSELUG00000008626	LARP4B	98	55.934	ENSCHIG00000013543	LARP4B	97	55.570	Capra_hircus
ENSELUG00000008626	LARP4B	82	61.562	ENSTSYG00000002568	LARP4B	100	61.250	Carlito_syrichta
ENSELUG00000008626	LARP4B	84	57.470	ENSCAPG00000009725	LARP4B	85	57.470	Cavia_aperea
ENSELUG00000008626	LARP4B	100	56.716	ENSCPOG00000009375	LARP4B	100	56.468	Cavia_porcellus
ENSELUG00000008626	LARP4B	100	55.348	ENSCCAG00000024869	LARP4B	100	55.100	Cebus_capucinus
ENSELUG00000008626	LARP4B	100	56.125	ENSCATG00000019750	LARP4B	100	55.750	Cercocebus_atys
ENSELUG00000008626	LARP4B	100	58.205	ENSCLAG00000011570	LARP4B	100	57.638	Chinchilla_lanigera
ENSELUG00000008626	LARP4B	62	81.818	ENSCHOG00000007831	-	62	81.818	Choloepus_hoffmanni
ENSELUG00000008626	LARP4B	100	61.519	ENSCPBG00000017063	LARP4B	100	60.696	Chrysemys_picta_bellii
ENSELUG00000008626	LARP4B	100	54.125	ENSCANG00000038021	LARP4B	100	53.875	Colobus_angolensis_palliatus
ENSELUG00000008626	LARP4B	100	55.652	ENSCGRG00001022930	Larp4b	100	59.901	Cricetulus_griseus_chok1gshd
ENSELUG00000008626	LARP4B	100	55.652	ENSCGRG00000006022	Larp4b	100	59.901	Cricetulus_griseus_crigri
ENSELUG00000008626	LARP4B	100	62.179	ENSCSEG00000007342	LARP4B	100	61.795	Cynoglossus_semilaevis
ENSELUG00000008626	LARP4B	100	70.865	ENSCVAG00000008910	LARP4B	100	71.283	Cyprinodon_variegatus
ENSELUG00000008626	LARP4B	95	53.846	ENSDARG00000062146	larp4b	98	54.050	Danio_rerio
ENSELUG00000008626	LARP4B	96	56.366	ENSDNOG00000045543	-	100	62.476	Dasypus_novemcinctus
ENSELUG00000008626	LARP4B	100	55.611	ENSDORG00000009328	Larp4b	100	60.500	Dipodomys_ordii
ENSELUG00000008626	LARP4B	87	58.101	ENSETEG00000011249	LARP4B	90	58.101	Echinops_telfairi
ENSELUG00000008626	LARP4B	93	57.450	ENSEASG00005019068	-	100	55.736	Equus_asinus_asinus
ENSELUG00000008626	LARP4B	93	57.718	ENSECAG00000024040	LARP4B	100	55.985	Equus_caballus
ENSELUG00000008626	LARP4B	95	56.159	ENSEEUG00000008391	LARP4B	98	55.276	Erinaceus_europaeus
ENSELUG00000008626	LARP4B	93	58.277	ENSFCAG00000000721	-	100	56.571	Felis_catus
ENSELUG00000008626	LARP4B	100	62.596	ENSFALG00000006961	LARP4B	100	62.339	Ficedula_albicollis
ENSELUG00000008626	LARP4B	100	56.296	ENSFDAG00000006158	LARP4B	97	56.049	Fukomys_damarensis
ENSELUG00000008626	LARP4B	100	57.463	ENSFHEG00000013037	LARP4B	65	97.479	Fundulus_heteroclitus
ENSELUG00000008626	LARP4B	81	69.647	ENSGMOG00000010818	-	83	69.882	Gadus_morhua
ENSELUG00000008626	LARP4B	100	61.154	ENSGALG00000006672	LARP4B	100	61.026	Gallus_gallus
ENSELUG00000008626	LARP4B	100	63.107	ENSGACG00000017535	LARP4B	98	63.482	Gasterosteus_aculeatus
ENSELUG00000008626	LARP4B	94	59.563	ENSGAGG00000008598	LARP4B	100	58.960	Gopherus_agassizii
ENSELUG00000008626	LARP4B	100	56.250	ENSGGOG00000003572	LARP4B	100	55.500	Gorilla_gorilla
ENSELUG00000008626	LARP4B	100	71.482	ENSHBUG00000007535	LARP4B	100	72.201	Haplochromis_burtoni
ENSELUG00000008626	LARP4B	100	55.624	ENSHGLG00000012936	LARP4B	100	61.716	Heterocephalus_glaber_female
ENSELUG00000008626	LARP4B	100	55.638	ENSHGLG00100016220	-	100	55.390	Heterocephalus_glaber_male
ENSELUG00000008626	LARP4B	87	49.641	ENSHGLG00100017261	-	100	49.642	Heterocephalus_glaber_male
ENSELUG00000008626	LARP4B	81	63.354	ENSHCOG00000011581	LARP4B	89	73.016	Hippocampus_comes
ENSELUG00000008626	LARP4B	96	54.161	ENSIPUG00000009705	larp4b	98	53.897	Ictalurus_punctatus
ENSELUG00000008626	LARP4B	93	61.438	ENSSTOG00000000587	LARP4B	97	61.111	Ictidomys_tridecemlineatus
ENSELUG00000008626	LARP4B	100	57.071	ENSJJAG00000020847	Larp4b	100	56.821	Jaculus_jaculus
ENSELUG00000008626	LARP4B	100	70.996	ENSKMAG00000021674	LARP4B	97	72.157	Kryptolebias_marmoratus
ENSELUG00000008626	LARP4B	78	77.905	ENSLBEG00000025293	-	82	78.396	Labrus_bergylta
ENSELUG00000008626	LARP4B	94	59.371	ENSLACG00000009492	LARP4B	100	59.452	Latimeria_chalumnae
ENSELUG00000008626	LARP4B	100	68.031	ENSLOCG00000012290	larp4b	100	67.478	Lepisosteus_oculatus
ENSELUG00000008626	LARP4B	100	56.134	ENSLAFG00000015334	LARP4B	100	56.010	Loxodonta_africana
ENSELUG00000008626	LARP4B	100	56.125	ENSMFAG00000001766	LARP4B	100	54.250	Macaca_fascicularis
ENSELUG00000008626	LARP4B	100	56.125	ENSMMUG00000005279	LARP4B	100	56.125	Macaca_mulatta
ENSELUG00000008626	LARP4B	100	56.000	ENSMNEG00000014019	LARP4B	100	53.750	Macaca_nemestrina
ENSELUG00000008626	LARP4B	100	56.180	ENSMLEG00000035198	LARP4B	100	55.805	Mandrillus_leucophaeus
ENSELUG00000008626	LARP4B	100	72.117	ENSMAMG00000013742	LARP4B	100	72.243	Mastacembelus_armatus
ENSELUG00000008626	LARP4B	86	93.103	ENSMZEG00005006498	-	93	93.103	Maylandia_zebra
ENSELUG00000008626	LARP4B	94	70.306	ENSMZEG00005014594	-	100	70.800	Maylandia_zebra
ENSELUG00000008626	LARP4B	100	58.271	ENSMGAG00000005472	LARP4B	100	57.769	Meleagris_gallopavo
ENSELUG00000008626	LARP4B	100	56.824	ENSMAUG00000021657	Larp4b	100	59.588	Mesocricetus_auratus
ENSELUG00000008626	LARP4B	100	57.761	ENSMICG00000001301	LARP4B	100	58.291	Microcebus_murinus
ENSELUG00000008626	LARP4B	91	58.320	ENSMOCG00000021452	Larp4b	100	58.003	Microtus_ochrogaster
ENSELUG00000008626	LARP4B	86	93.103	ENSMMOG00000011253	-	100	59.669	Mola_mola
ENSELUG00000008626	LARP4B	100	58.354	ENSMODG00000005957	LARP4B	100	57.921	Monodelphis_domestica
ENSELUG00000008626	LARP4B	100	57.752	ENSMALG00000012432	LARP4B	100	57.881	Monopterus_albus
ENSELUG00000008626	LARP4B	100	56.592	MGP_CAROLIEiJ_G0018216	Larp4b	100	59.271	Mus_caroli
ENSELUG00000008626	LARP4B	100	56.700	ENSMUSG00000033499	Larp4b	100	60.000	Mus_musculus
ENSELUG00000008626	LARP4B	100	57.463	MGP_PahariEiJ_G0019266	Larp4b	100	61.424	Mus_pahari
ENSELUG00000008626	LARP4B	100	56.576	MGP_SPRETEiJ_G0019074	Larp4b	100	60.165	Mus_spretus
ENSELUG00000008626	LARP4B	94	57.237	ENSMPUG00000016220	LARP4B	97	56.149	Mustela_putorius_furo
ENSELUG00000008626	LARP4B	88	57.642	ENSMLUG00000005880	LARP4B	99	55.541	Myotis_lucifugus
ENSELUG00000008626	LARP4B	100	56.095	ENSNGAG00000001750	Larp4b	100	57.000	Nannospalax_galili
ENSELUG00000008626	LARP4B	91	93.103	ENSNBRG00000020018	LARP4B	93	93.103	Neolamprologus_brichardi
ENSELUG00000008626	LARP4B	100	55.750	ENSNLEG00000013442	LARP4B	100	55.500	Nomascus_leucogenys
ENSELUG00000008626	LARP4B	83	49.132	ENSMEUG00000013114	-	83	47.880	Notamacropus_eugenii
ENSELUG00000008626	LARP4B	100	52.788	ENSOPRG00000003300	LARP4B	100	52.788	Ochotona_princeps
ENSELUG00000008626	LARP4B	100	52.861	ENSODEG00000001109	LARP4B	100	57.947	Octodon_degus
ENSELUG00000008626	LARP4B	100	70.610	ENSONIG00000017705	LARP4B	100	71.322	Oreochromis_niloticus
ENSELUG00000008626	LARP4B	100	58.458	ENSOANG00000006100	LARP4B	100	58.157	Ornithorhynchus_anatinus
ENSELUG00000008626	LARP4B	100	55.286	ENSOCUG00000004950	LARP4B	97	55.164	Oryctolagus_cuniculus
ENSELUG00000008626	LARP4B	100	69.910	ENSORLG00000006080	LARP4B	100	69.936	Oryzias_latipes
ENSELUG00000008626	LARP4B	100	70.051	ENSORLG00020020940	LARP4B	100	70.051	Oryzias_latipes_hni
ENSELUG00000008626	LARP4B	100	69.975	ENSORLG00015020608	LARP4B	100	69.975	Oryzias_latipes_hsok
ENSELUG00000008626	LARP4B	100	70.115	ENSOMEG00000019619	LARP4B	100	69.860	Oryzias_melastigma
ENSELUG00000008626	LARP4B	96	56.803	ENSOGAG00000011540	LARP4B	99	56.275	Otolemur_garnettii
ENSELUG00000008626	LARP4B	100	55.335	ENSOARG00000015320	LARP4B	98	54.783	Ovis_aries
ENSELUG00000008626	LARP4B	100	56.040	ENSPPAG00000039232	LARP4B	100	55.362	Pan_paniscus
ENSELUG00000008626	LARP4B	93	58.277	ENSPPRG00000009489	LARP4B	100	56.696	Panthera_pardus
ENSELUG00000008626	LARP4B	93	58.277	ENSPTIG00000008543	LARP4B	100	56.696	Panthera_tigris_altaica
ENSELUG00000008626	LARP4B	100	56.040	ENSPTRG00000002235	LARP4B	100	55.362	Pan_troglodytes
ENSELUG00000008626	LARP4B	100	56.125	ENSPANG00000023546	LARP4B	100	53.875	Papio_anubis
ENSELUG00000008626	LARP4B	99	62.532	ENSPKIG00000012368	LARP4B	96	63.444	Paramormyrops_kingsleyae
ENSELUG00000008626	LARP4B	74	72.036	ENSPSIG00000005600	LARP4B	99	71.733	Pelodiscus_sinensis
ENSELUG00000008626	LARP4B	74	64.511	ENSPMGG00000008261	LARP4B	76	64.511	Periophthalmus_magnuspinnatus
ENSELUG00000008626	LARP4B	100	56.219	ENSPEMG00000014052	Larp4b	100	55.970	Peromyscus_maniculatus_bairdii
ENSELUG00000008626	LARP4B	100	71.736	ENSPFOG00000000029	LARP4B	100	71.429	Poecilia_formosa
ENSELUG00000008626	LARP4B	100	72.152	ENSPLAG00000002871	LARP4B	100	72.152	Poecilia_latipinna
ENSELUG00000008626	LARP4B	100	71.610	ENSPMEG00000016361	LARP4B	100	71.302	Poecilia_mexicana
ENSELUG00000008626	LARP4B	100	55.362	ENSPPYG00000002035	LARP4B	97	55.112	Pongo_abelii
ENSELUG00000008626	LARP4B	100	55.764	ENSPCOG00000014688	LARP4B	100	55.514	Propithecus_coquereli
ENSELUG00000008626	LARP4B	82	57.188	ENSPVAG00000009784	LARP4B	83	56.182	Pteropus_vampyrus
ENSELUG00000008626	LARP4B	100	71.108	ENSPNYG00000024252	LARP4B	100	71.820	Pundamilia_nyererei
ENSELUG00000008626	LARP4B	90	55.618	ENSPNAG00000028956	larp4b	93	55.337	Pygocentrus_nattereri
ENSELUG00000008626	LARP4B	99	55.985	ENSRNOG00000015888	Larp4b	100	55.860	Rattus_norvegicus
ENSELUG00000008626	LARP4B	100	55.875	ENSRBIG00000033294	LARP4B	100	55.625	Rhinopithecus_bieti
ENSELUG00000008626	LARP4B	100	56.000	ENSRROG00000033879	LARP4B	100	55.750	Rhinopithecus_roxellana
ENSELUG00000008626	LARP4B	100	50.556	ENSSBOG00000021109	LARP4B	100	50.309	Saimiri_boliviensis_boliviensis
ENSELUG00000008626	LARP4B	100	60.742	ENSSHAG00000013392	LARP4B	100	60.051	Sarcophilus_harrisii
ENSELUG00000008626	LARP4B	96	61.987	ENSSFOG00015003256	LARP4B	89	62.665	Scleropages_formosus
ENSELUG00000008626	LARP4B	85	96.296	ENSSMAG00000005982	-	100	96.296	Scophthalmus_maximus
ENSELUG00000008626	LARP4B	100	73.644	ENSSDUG00000006704	LARP4B	100	74.401	Seriola_dumerili
ENSELUG00000008626	LARP4B	82	71.319	ENSSLDG00000020660	LARP4B	100	70.706	Seriola_lalandi_dorsalis
ENSELUG00000008626	LARP4B	65	82.243	ENSSARG00000001243	-	79	82.243	Sorex_araneus
ENSELUG00000008626	LARP4B	100	57.180	ENSSPUG00000002102	-	91	63.790	Sphenodon_punctatus
ENSELUG00000008626	LARP4B	90	64.696	ENSSPUG00000013734	-	100	64.000	Sphenodon_punctatus
ENSELUG00000008626	LARP4B	86	96.552	ENSSPAG00000014628	LARP4B	92	96.552	Stegastes_partitus
ENSELUG00000008626	LARP4B	100	56.554	ENSSSCG00000011162	LARP4B	97	60.995	Sus_scrofa
ENSELUG00000008626	LARP4B	100	61.274	ENSTGUG00000000811	-	100	61.019	Taeniopygia_guttata
ENSELUG00000008626	LARP4B	99	59.827	ENSTNIG00000007991	LARP4B	99	66.074	Tetraodon_nigroviridis
ENSELUG00000008626	LARP4B	100	61.700	ENSTNIG00000004571	-	98	62.331	Tetraodon_nigroviridis
ENSELUG00000008626	LARP4B	81	60.837	ENSTTRG00000011151	LARP4B	89	60.837	Tursiops_truncatus
ENSELUG00000008626	LARP4B	86	57.654	ENSUAMG00000016461	LARP4B	95	57.511	Ursus_americanus
ENSELUG00000008626	LARP4B	94	56.711	ENSUMAG00000016127	LARP4B	100	55.930	Ursus_maritimus
ENSELUG00000008626	LARP4B	94	57.672	ENSVVUG00000008641	LARP4B	100	56.429	Vulpes_vulpes
ENSELUG00000008626	LARP4B	99	59.588	ENSXETG00000016882	larp4b	97	60.000	Xenopus_tropicalis
ENSELUG00000008626	LARP4B	100	60.453	ENSXCOG00000019952	LARP4B	63	96.581	Xiphophorus_couchianus
ENSELUG00000008626	LARP4B	100	71.811	ENSXMAG00000021533	LARP4B	100	71.811	Xiphophorus_maculatus