EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000008742 (Gene tree)
Gene ID: 105021833
Gene Symbol: cnot4a
Alias: si:dkey-230e6.2
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 18408 bases
Position: chrLG19:12536903-12555310
Accession: 105021833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000031246	RRM_1	PF00076.22	1.3e-05	1	1
ENSELUP00000031259	RRM_1	PF00076.22	2.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000006215	-	5185	XM_010889777	ENSELUP00000031259	863 (aa)	XP_010888079	UPI0009734958
ENSELUT00000006253	-	1893	-	ENSELUP00000031246	630 (aa)	-	-

Gene Model

Click here to download ENSELUG00000008742's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000008742's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000008742	cnot4a	96	88.971	ENSELUG00000011540	cnot4b	99	88.043

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000008742	cnot4a	90	90.637	ENSG00000080802	CNOT4	99	90.637	Homo_sapiens
ENSELUG00000008742	cnot4a	96	95.572	ENSAPOG00000016272	cnot4a	98	94.545	Acanthochromis_polyacanthus
ENSELUG00000008742	cnot4a	90	90.094	ENSAMEG00000012081	CNOT4	90	90.094	Ailuropoda_melanoleuca
ENSELUG00000008742	cnot4a	100	95.572	ENSACIG00000003011	cnot4a	90	95.572	Amphilophus_citrinellus
ENSELUG00000008742	cnot4a	100	95.572	ENSAOCG00000010792	cnot4a	99	94.545	Amphiprion_ocellaris
ENSELUG00000008742	cnot4a	100	95.572	ENSAPEG00000004680	cnot4a	99	94.545	Amphiprion_percula
ENSELUG00000008742	cnot4a	100	95.203	ENSATEG00000017580	cnot4a	99	94.182	Anabas_testudineus
ENSELUG00000008742	cnot4a	99	64.638	ENSAPLG00000016441	CNOT4	99	63.751	Anas_platyrhynchos
ENSELUG00000008742	cnot4a	99	63.406	ENSACAG00000011154	CNOT4	99	63.061	Anolis_carolinensis
ENSELUG00000008742	cnot4a	90	90.637	ENSANAG00000032156	CNOT4	99	90.637	Aotus_nancymaae
ENSELUG00000008742	cnot4a	100	95.572	ENSACLG00000002514	cnot4a	99	94.545	Astatotilapia_calliptera
ENSELUG00000008742	cnot4a	84	93.502	ENSAMXG00000001373	cnot4a	99	87.829	Astyanax_mexicanus
ENSELUG00000008742	cnot4a	100	90.217	ENSAMXG00000011473	cnot4b	99	90.909	Astyanax_mexicanus
ENSELUG00000008742	cnot4a	90	90.637	ENSBTAG00000017919	CNOT4	99	90.637	Bos_taurus
ENSELUG00000008742	cnot4a	90	90.637	ENSCJAG00000012532	CNOT4	99	90.637	Callithrix_jacchus
ENSELUG00000008742	cnot4a	90	90.637	ENSCAFG00000003223	CNOT4	99	90.637	Canis_familiaris
ENSELUG00000008742	cnot4a	83	90.637	ENSCAFG00020000093	CNOT4	99	90.637	Canis_lupus_dingo
ENSELUG00000008742	cnot4a	90	90.637	ENSCHIG00000010955	CNOT4	99	90.637	Capra_hircus
ENSELUG00000008742	cnot4a	90	90.637	ENSTSYG00000000893	CNOT4	99	90.637	Carlito_syrichta
ENSELUG00000008742	cnot4a	90	90.262	ENSCAPG00000006213	CNOT4	99	90.262	Cavia_aperea
ENSELUG00000008742	cnot4a	90	90.637	ENSCPOG00000011526	CNOT4	99	90.637	Cavia_porcellus
ENSELUG00000008742	cnot4a	90	90.637	ENSCCAG00000024414	CNOT4	99	90.637	Cebus_capucinus
ENSELUG00000008742	cnot4a	90	90.637	ENSCATG00000022607	CNOT4	99	90.637	Cercocebus_atys
ENSELUG00000008742	cnot4a	90	90.637	ENSCLAG00000001857	CNOT4	99	90.637	Chinchilla_lanigera
ENSELUG00000008742	cnot4a	90	90.637	ENSCSAG00000009096	CNOT4	99	90.637	Chlorocebus_sabaeus
ENSELUG00000008742	cnot4a	63	94.118	ENSCHOG00000010412	CNOT4	67	94.118	Choloepus_hoffmanni
ENSELUG00000008742	cnot4a	90	90.637	ENSCPBG00000004959	CNOT4	99	90.637	Chrysemys_picta_bellii
ENSELUG00000008742	cnot4a	90	90.637	ENSCANG00000029319	CNOT4	99	90.637	Colobus_angolensis_palliatus
ENSELUG00000008742	cnot4a	90	90.637	ENSCGRG00001014651	Cnot4	99	90.637	Cricetulus_griseus_chok1gshd
ENSELUG00000008742	cnot4a	90	90.637	ENSCGRG00000005727	Cnot4	99	90.637	Cricetulus_griseus_crigri
ENSELUG00000008742	cnot4a	96	95.572	ENSCSEG00000015080	cnot4a	94	94.545	Cynoglossus_semilaevis
ENSELUG00000008742	cnot4a	100	94.834	ENSCVAG00000009399	cnot4a	99	94.182	Cyprinodon_variegatus
ENSELUG00000008742	cnot4a	100	90.545	ENSDARG00000007639	cnot4b	86	90.545	Danio_rerio
ENSELUG00000008742	cnot4a	100	72.585	ENSDARG00000007045	cnot4a	100	72.051	Danio_rerio
ENSELUG00000008742	cnot4a	90	90.637	ENSDNOG00000009409	CNOT4	99	90.637	Dasypus_novemcinctus
ENSELUG00000008742	cnot4a	90	90.637	ENSDORG00000012268	Cnot4	99	90.637	Dipodomys_ordii
ENSELUG00000008742	cnot4a	87	85.393	ENSETEG00000013407	CNOT4	90	85.393	Echinops_telfairi
ENSELUG00000008742	cnot4a	100	69.345	ENSEASG00005014430	CNOT4	99	90.637	Equus_asinus_asinus
ENSELUG00000008742	cnot4a	90	90.637	ENSECAG00000020262	CNOT4	99	90.637	Equus_caballus
ENSELUG00000008742	cnot4a	90	90.637	ENSFCAG00000011904	CNOT4	99	90.637	Felis_catus
ENSELUG00000008742	cnot4a	99	64.713	ENSFALG00000011194	CNOT4	99	63.982	Ficedula_albicollis
ENSELUG00000008742	cnot4a	90	90.637	ENSFDAG00000013525	CNOT4	99	90.637	Fukomys_damarensis
ENSELUG00000008742	cnot4a	100	94.834	ENSFHEG00000006608	cnot4a	99	94.853	Fundulus_heteroclitus
ENSELUG00000008742	cnot4a	93	78.378	ENSGMOG00000001329	cnot4a	99	69.019	Gadus_morhua
ENSELUG00000008742	cnot4a	90	90.637	ENSGALG00000011682	CNOT4	99	90.637	Gallus_gallus
ENSELUG00000008742	cnot4a	100	94.465	ENSGACG00000004276	cnot4a	99	93.455	Gasterosteus_aculeatus
ENSELUG00000008742	cnot4a	90	90.637	ENSGAGG00000017331	CNOT4	99	90.637	Gopherus_agassizii
ENSELUG00000008742	cnot4a	84	89.671	ENSGGOG00000000142	CNOT4	98	89.671	Gorilla_gorilla
ENSELUG00000008742	cnot4a	100	95.572	ENSHBUG00000000027	cnot4a	99	94.545	Haplochromis_burtoni
ENSELUG00000008742	cnot4a	90	90.637	ENSHGLG00000011533	CNOT4	99	90.637	Heterocephalus_glaber_female
ENSELUG00000008742	cnot4a	88	72.663	ENSHGLG00100013058	CNOT4	93	90.637	Heterocephalus_glaber_male
ENSELUG00000008742	cnot4a	98	96.241	ENSHCOG00000015815	cnot4a	99	94.182	Hippocampus_comes
ENSELUG00000008742	cnot4a	92	93.727	ENSIPUG00000006393	cnot4	99	87.171	Ictalurus_punctatus
ENSELUG00000008742	cnot4a	99	93.609	ENSIPUG00000016994	cnot4b	99	91.971	Ictalurus_punctatus
ENSELUG00000008742	cnot4a	90	90.637	ENSSTOG00000007717	CNOT4	99	90.637	Ictidomys_tridecemlineatus
ENSELUG00000008742	cnot4a	91	62.287	ENSJJAG00000019991	-	93	88.015	Jaculus_jaculus
ENSELUG00000008742	cnot4a	90	90.637	ENSJJAG00000016618	Cnot4	99	90.637	Jaculus_jaculus
ENSELUG00000008742	cnot4a	93	93.382	ENSKMAG00000004581	cnot4a	99	93.818	Kryptolebias_marmoratus
ENSELUG00000008742	cnot4a	100	95.572	ENSLBEG00000009999	cnot4a	85	95.572	Labrus_bergylta
ENSELUG00000008742	cnot4a	100	66.620	ENSLACG00000002647	CNOT4	99	66.620	Latimeria_chalumnae
ENSELUG00000008742	cnot4a	100	84.158	ENSLOCG00000016126	cnot4a	88	84.158	Lepisosteus_oculatus
ENSELUG00000008742	cnot4a	90	90.637	ENSLAFG00000000709	CNOT4	99	90.637	Loxodonta_africana
ENSELUG00000008742	cnot4a	90	90.637	ENSMFAG00000046349	CNOT4	99	90.637	Macaca_fascicularis
ENSELUG00000008742	cnot4a	90	90.637	ENSMMUG00000016181	CNOT4	99	90.637	Macaca_mulatta
ENSELUG00000008742	cnot4a	90	90.637	ENSMNEG00000042164	CNOT4	99	90.637	Macaca_nemestrina
ENSELUG00000008742	cnot4a	90	90.637	ENSMLEG00000032709	CNOT4	99	90.637	Mandrillus_leucophaeus
ENSELUG00000008742	cnot4a	100	95.572	ENSMAMG00000023194	cnot4a	99	95.588	Mastacembelus_armatus
ENSELUG00000008742	cnot4a	100	95.572	ENSMZEG00005007312	cnot4a	99	88.727	Maylandia_zebra
ENSELUG00000008742	cnot4a	99	64.368	ENSMGAG00000011788	CNOT4	99	63.636	Meleagris_gallopavo
ENSELUG00000008742	cnot4a	90	90.637	ENSMAUG00000020415	Cnot4	99	90.637	Mesocricetus_auratus
ENSELUG00000008742	cnot4a	90	90.637	ENSMICG00000001667	CNOT4	99	90.637	Microcebus_murinus
ENSELUG00000008742	cnot4a	90	90.637	ENSMOCG00000020955	Cnot4	99	90.637	Microtus_ochrogaster
ENSELUG00000008742	cnot4a	93	83.195	ENSMMOG00000014565	cnot4a	94	94.545	Mola_mola
ENSELUG00000008742	cnot4a	90	90.637	ENSMODG00000014068	CNOT4	99	90.637	Monodelphis_domestica
ENSELUG00000008742	cnot4a	96	93.015	ENSMALG00000011662	cnot4a	87	79.337	Monopterus_albus
ENSELUG00000008742	cnot4a	90	90.637	MGP_CAROLIEiJ_G0028217	Cnot4	99	90.637	Mus_caroli
ENSELUG00000008742	cnot4a	90	90.637	ENSMUSG00000038784	Cnot4	99	90.637	Mus_musculus
ENSELUG00000008742	cnot4a	90	90.637	MGP_PahariEiJ_G0021974	Cnot4	99	90.637	Mus_pahari
ENSELUG00000008742	cnot4a	90	90.637	MGP_SPRETEiJ_G0029216	Cnot4	99	90.637	Mus_spretus
ENSELUG00000008742	cnot4a	90	90.637	ENSMPUG00000004089	CNOT4	99	90.637	Mustela_putorius_furo
ENSELUG00000008742	cnot4a	83	90.637	ENSMLUG00000008260	CNOT4	99	90.637	Myotis_lucifugus
ENSELUG00000008742	cnot4a	90	90.637	ENSNGAG00000015030	Cnot4	99	90.637	Nannospalax_galili
ENSELUG00000008742	cnot4a	100	76.077	ENSNBRG00000021144	cnot4a	99	88.364	Neolamprologus_brichardi
ENSELUG00000008742	cnot4a	90	90.262	ENSNLEG00000013352	CNOT4	99	90.262	Nomascus_leucogenys
ENSELUG00000008742	cnot4a	83	67.532	ENSOPRG00000001023	CNOT4	73	96.262	Ochotona_princeps
ENSELUG00000008742	cnot4a	90	90.637	ENSODEG00000012975	CNOT4	99	90.637	Octodon_degus
ENSELUG00000008742	cnot4a	100	95.572	ENSONIG00000008656	cnot4a	90	95.572	Oreochromis_niloticus
ENSELUG00000008742	cnot4a	90	90.637	ENSOANG00000005006	CNOT4	99	90.637	Ornithorhynchus_anatinus
ENSELUG00000008742	cnot4a	90	90.637	ENSOCUG00000013448	CNOT4	99	90.637	Oryctolagus_cuniculus
ENSELUG00000008742	cnot4a	82	93.455	ENSORLG00000003727	cnot4a	99	93.455	Oryzias_latipes
ENSELUG00000008742	cnot4a	100	76.304	ENSORLG00020015684	cnot4a	99	93.818	Oryzias_latipes_hni
ENSELUG00000008742	cnot4a	82	93.818	ENSORLG00015008470	cnot4a	99	93.818	Oryzias_latipes_hsok
ENSELUG00000008742	cnot4a	100	94.096	ENSOMEG00000011084	cnot4a	99	93.455	Oryzias_melastigma
ENSELUG00000008742	cnot4a	90	90.637	ENSOGAG00000015499	CNOT4	99	90.637	Otolemur_garnettii
ENSELUG00000008742	cnot4a	90	90.637	ENSOARG00000008803	CNOT4	99	90.637	Ovis_aries
ENSELUG00000008742	cnot4a	90	90.637	ENSPPAG00000041937	CNOT4	99	90.637	Pan_paniscus
ENSELUG00000008742	cnot4a	90	90.637	ENSPPRG00000023940	CNOT4	99	90.637	Panthera_pardus
ENSELUG00000008742	cnot4a	90	90.637	ENSPTIG00000016601	CNOT4	99	90.637	Panthera_tigris_altaica
ENSELUG00000008742	cnot4a	90	90.637	ENSPTRG00000019727	CNOT4	99	90.637	Pan_troglodytes
ENSELUG00000008742	cnot4a	90	90.637	ENSPANG00000017724	CNOT4	99	90.637	Papio_anubis
ENSELUG00000008742	cnot4a	92	88.686	ENSPKIG00000018137	cnot4a	99	82.566	Paramormyrops_kingsleyae
ENSELUG00000008742	cnot4a	99	63.218	ENSPSIG00000011256	CNOT4	99	63.103	Pelodiscus_sinensis
ENSELUG00000008742	cnot4a	100	79.018	ENSPMGG00000005671	cnot4a	99	94.909	Periophthalmus_magnuspinnatus
ENSELUG00000008742	cnot4a	90	90.637	ENSPEMG00000021566	Cnot4	99	90.637	Peromyscus_maniculatus_bairdii
ENSELUG00000008742	cnot4a	90	90.637	ENSPCIG00000029622	CNOT4	95	90.637	Phascolarctos_cinereus
ENSELUG00000008742	cnot4a	100	94.834	ENSPFOG00000002228	cnot4a	91	94.834	Poecilia_formosa
ENSELUG00000008742	cnot4a	100	94.834	ENSPLAG00000001780	cnot4a	99	94.182	Poecilia_latipinna
ENSELUG00000008742	cnot4a	100	94.834	ENSPMEG00000006852	cnot4a	99	94.182	Poecilia_mexicana
ENSELUG00000008742	cnot4a	100	94.834	ENSPREG00000008171	cnot4a	99	93.382	Poecilia_reticulata
ENSELUG00000008742	cnot4a	90	90.637	ENSPPYG00000018026	CNOT4	99	90.637	Pongo_abelii
ENSELUG00000008742	cnot4a	90	90.637	ENSPCOG00000019907	CNOT4	99	90.637	Propithecus_coquereli
ENSELUG00000008742	cnot4a	96	63.716	ENSPVAG00000004905	CNOT4	92	90.637	Pteropus_vampyrus
ENSELUG00000008742	cnot4a	100	95.572	ENSPNYG00000004276	cnot4a	99	88.727	Pundamilia_nyererei
ENSELUG00000008742	cnot4a	99	93.233	ENSPNAG00000008679	cnot4b	99	93.233	Pygocentrus_nattereri
ENSELUG00000008742	cnot4a	91	93.407	ENSPNAG00000020433	cnot4a	99	93.407	Pygocentrus_nattereri
ENSELUG00000008742	cnot4a	90	90.637	ENSRNOG00000010795	Cnot4	99	90.637	Rattus_norvegicus
ENSELUG00000008742	cnot4a	90	90.637	ENSRBIG00000043977	CNOT4	99	90.637	Rhinopithecus_bieti
ENSELUG00000008742	cnot4a	90	90.637	ENSSBOG00000020808	CNOT4	99	90.637	Saimiri_boliviensis_boliviensis
ENSELUG00000008742	cnot4a	90	90.637	ENSSHAG00000013639	CNOT4	99	90.637	Sarcophilus_harrisii
ENSELUG00000008742	cnot4a	100	83.849	ENSSFOG00015002019	cnot4a	99	88.727	Scleropages_formosus
ENSELUG00000008742	cnot4a	100	85.809	ENSSFOG00015017285	CNOT4	99	86.184	Scleropages_formosus
ENSELUG00000008742	cnot4a	100	95.572	ENSSMAG00000008614	cnot4a	99	95.588	Scophthalmus_maximus
ENSELUG00000008742	cnot4a	100	95.572	ENSSDUG00000022635	cnot4a	99	94.545	Seriola_dumerili
ENSELUG00000008742	cnot4a	100	69.419	ENSSDUG00000018585	cnot4b	99	90.545	Seriola_dumerili
ENSELUG00000008742	cnot4a	99	57.506	ENSSLDG00000014347	cnot4b	99	57.852	Seriola_lalandi_dorsalis
ENSELUG00000008742	cnot4a	100	95.572	ENSSLDG00000015770	cnot4a	99	95.588	Seriola_lalandi_dorsalis
ENSELUG00000008742	cnot4a	83	90.637	ENSSPUG00000004677	CNOT4	99	90.637	Sphenodon_punctatus
ENSELUG00000008742	cnot4a	100	95.572	ENSSPAG00000012329	cnot4a	99	94.545	Stegastes_partitus
ENSELUG00000008742	cnot4a	90	90.637	ENSSSCG00000021354	CNOT4	99	90.637	Sus_scrofa
ENSELUG00000008742	cnot4a	99	64.598	ENSTGUG00000009161	CNOT4	99	63.867	Taeniopygia_guttata
ENSELUG00000008742	cnot4a	100	94.465	ENSTRUG00000016861	cnot4a	99	93.455	Takifugu_rubripes
ENSELUG00000008742	cnot4a	91	88.603	ENSTNIG00000016000	cnot4a	99	88.603	Tetraodon_nigroviridis
ENSELUG00000008742	cnot4a	80	86.142	ENSTBEG00000002202	CNOT4	88	85.019	Tupaia_belangeri
ENSELUG00000008742	cnot4a	80	90.637	ENSTTRG00000005122	CNOT4	89	90.637	Tursiops_truncatus
ENSELUG00000008742	cnot4a	83	90.637	ENSUAMG00000026759	CNOT4	99	90.637	Ursus_americanus
ENSELUG00000008742	cnot4a	90	90.637	ENSUMAG00000015351	CNOT4	94	90.637	Ursus_maritimus
ENSELUG00000008742	cnot4a	90	90.637	ENSVVUG00000006200	CNOT4	99	90.637	Vulpes_vulpes
ENSELUG00000008742	cnot4a	99	90.262	ENSXETG00000010594	cnot4	88	90.262	Xenopus_tropicalis
ENSELUG00000008742	cnot4a	77	93.818	ENSXCOG00000020824	cnot4a	98	93.818	Xiphophorus_couchianus
ENSELUG00000008742	cnot4a	91	93.455	ENSXMAG00000016984	cnot4a	99	93.455	Xiphophorus_maculatus