EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000008849 (Gene tree)
Gene ID: 105021606
Gene Symbol: -
Alias: -
Full Name: THO complex subunit 4-A
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 3294 bases
Position: chrLG09:6162816-6166109
Accession: 105021606
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000031325	RRM_1	PF00076.22	4e-13	1	1
ENSELUP00000031343	RRM_1	PF00076.22	4.5e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000006024	-	1765	XM_010889379	ENSELUP00000031343	273 (aa)	XP_010887681	UPI0005764FEE
ENSELUT00000006054	-	1717	-	ENSELUP00000031325	257 (aa)	-	-

Gene Model

Click here to download ENSELUG00000008849's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03013	RNA transport	KEGG
els03015	mRNA surveillance pathway	KEGG
els03040	Spliceosome	KEGG
els05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000008849's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000008849	-	100	61.724	ENSELUG00000017178	alyref	100	63.121

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000008849	-	100	61.069	ENSAPOG00000000183	-	100	61.832	Acanthochromis_polyacanthus
ENSELUG00000008849	-	100	54.152	ENSACIG00000020351	-	100	54.513	Amphilophus_citrinellus
ENSELUG00000008849	-	99	61.151	ENSACIG00000006351	alyref	98	67.857	Amphilophus_citrinellus
ENSELUG00000008849	-	100	63.441	ENSAOCG00000014012	alyref	100	70.251	Amphiprion_ocellaris
ENSELUG00000008849	-	100	57.634	ENSAOCG00000019305	-	100	59.160	Amphiprion_ocellaris
ENSELUG00000008849	-	100	63.441	ENSAPEG00000014603	alyref	100	70.251	Amphiprion_percula
ENSELUG00000008849	-	100	57.634	ENSAPEG00000013527	-	100	59.160	Amphiprion_percula
ENSELUG00000008849	-	100	60.145	ENSATEG00000000382	-	100	58.333	Anabas_testudineus
ENSELUG00000008849	-	100	63.701	ENSATEG00000004307	alyref	100	66.784	Anabas_testudineus
ENSELUG00000008849	-	55	65.957	ENSAPLG00000014745	-	100	67.123	Anas_platyrhynchos
ENSELUG00000008849	-	100	60.741	ENSACLG00000010184	-	100	61.111	Astatotilapia_calliptera
ENSELUG00000008849	-	100	62.724	ENSACLG00000008432	alyref	100	70.968	Astatotilapia_calliptera
ENSELUG00000008849	-	100	65.141	ENSAMXG00000007359	alyref	100	65.845	Astyanax_mexicanus
ENSELUG00000008849	-	99	47.887	ENSCING00000013568	-	99	47.653	Ciona_intestinalis
ENSELUG00000008849	-	99	46.909	ENSCSAVG00000003324	-	99	45.818	Ciona_savignyi
ENSELUG00000008849	-	100	63.538	ENSCSEG00000017800	alyref	100	69.314	Cynoglossus_semilaevis
ENSELUG00000008849	-	100	64.029	ENSCVAG00000014869	alyref	100	71.942	Cyprinodon_variegatus
ENSELUG00000008849	-	100	52.809	ENSCVAG00000007789	-	100	51.311	Cyprinodon_variegatus
ENSELUG00000008849	-	100	66.202	ENSDARG00000077732	alyref	100	67.596	Danio_rerio
ENSELUG00000008849	-	99	43.509	FBgn0010774	Ref1	98	39.655	Drosophila_melanogaster
ENSELUG00000008849	-	99	47.985	ENSEBUG00000008253	alyref	95	45.548	Eptatretus_burgeri
ENSELUG00000008849	-	100	42.205	ENSEBUG00000006305	alyref	100	42.146	Eptatretus_burgeri
ENSELUG00000008849	-	64	71.687	ENSFALG00000011923	-	96	69.753	Ficedula_albicollis
ENSELUG00000008849	-	100	66.071	ENSFHEG00000019426	alyref	100	66.202	Fundulus_heteroclitus
ENSELUG00000008849	-	100	54.682	ENSFHEG00000004698	-	100	51.685	Fundulus_heteroclitus
ENSELUG00000008849	-	100	61.733	ENSGMOG00000009882	alyref	100	61.372	Gadus_morhua
ENSELUG00000008849	-	75	60.606	ENSGMOG00000013122	-	100	60.101	Gadus_morhua
ENSELUG00000008849	-	100	64.664	ENSGAFG00000006014	alyref	100	65.371	Gambusia_affinis
ENSELUG00000008849	-	100	52.809	ENSGAFG00000007573	-	100	49.064	Gambusia_affinis
ENSELUG00000008849	-	100	62.724	ENSHBUG00000020196	alyref	100	70.968	Haplochromis_burtoni
ENSELUG00000008849	-	100	60.357	ENSHBUG00000001454	-	100	61.210	Haplochromis_burtoni
ENSELUG00000008849	-	100	54.475	ENSHCOG00000012825	-	95	53.725	Hippocampus_comes
ENSELUG00000008849	-	100	65.018	ENSIPUG00000009469	alyref	100	67.138	Ictalurus_punctatus
ENSELUG00000008849	-	81	56.682	ENSSTOG00000016570	-	99	53.670	Ictidomys_tridecemlineatus
ENSELUG00000008849	-	100	68.571	ENSKMAG00000008912	alyref	100	69.149	Kryptolebias_marmoratus
ENSELUG00000008849	-	99	54.962	ENSKMAG00000006462	-	98	54.198	Kryptolebias_marmoratus
ENSELUG00000008849	-	99	58.238	ENSLBEG00000012930	-	99	54.023	Labrus_bergylta
ENSELUG00000008849	-	100	66.901	ENSLBEG00000023118	alyref	90	68.846	Labrus_bergylta
ENSELUG00000008849	-	100	57.401	ENSLBEG00000005387	-	100	55.036	Labrus_bergylta
ENSELUG00000008849	-	85	65.766	ENSLOCG00000013879	alyref	89	65.455	Lepisosteus_oculatus
ENSELUG00000008849	-	100	67.626	ENSMAMG00000003034	alyref	100	69.643	Mastacembelus_armatus
ENSELUG00000008849	-	100	60.227	ENSMAMG00000005464	-	100	57.955	Mastacembelus_armatus
ENSELUG00000008849	-	100	62.724	ENSMZEG00005008639	alyref	100	70.968	Maylandia_zebra
ENSELUG00000008849	-	100	60.370	ENSMZEG00005012096	-	100	61.111	Maylandia_zebra
ENSELUG00000008849	-	99	53.125	ENSMMOG00000007032	-	98	51.373	Mola_mola
ENSELUG00000008849	-	100	64.516	ENSMMOG00000012458	alyref	97	63.799	Mola_mola
ENSELUG00000008849	-	100	57.455	ENSMALG00000006054	-	98	54.545	Monopterus_albus
ENSELUG00000008849	-	100	53.521	ENSMLUG00000014372	-	100	52.113	Myotis_lucifugus
ENSELUG00000008849	-	100	54.386	ENSMLUG00000004098	-	100	53.571	Myotis_lucifugus
ENSELUG00000008849	-	98	48.561	ENSMLUG00000022178	-	98	47.535	Myotis_lucifugus
ENSELUG00000008849	-	98	48.057	ENSMLUG00000030671	-	99	46.918	Myotis_lucifugus
ENSELUG00000008849	-	98	49.817	ENSMLUG00000009247	-	98	48.375	Myotis_lucifugus
ENSELUG00000008849	-	77	55.779	ENSMLUG00000028605	-	98	45.329	Myotis_lucifugus
ENSELUG00000008849	-	100	52.128	ENSMLUG00000006521	-	100	51.418	Myotis_lucifugus
ENSELUG00000008849	-	98	48.432	ENSMLUG00000022467	-	98	46.853	Myotis_lucifugus
ENSELUG00000008849	-	100	57.565	ENSNGAG00000022014	-	100	60.456	Nannospalax_galili
ENSELUG00000008849	-	100	61.567	ENSNBRG00000017460	-	100	61.940	Neolamprologus_brichardi
ENSELUG00000008849	-	100	62.278	ENSNBRG00000001747	alyref	100	70.819	Neolamprologus_brichardi
ENSELUG00000008849	-	100	60.727	ENSONIG00000003296	-	100	60.507	Oreochromis_niloticus
ENSELUG00000008849	-	100	64.413	ENSONIG00000019434	alyref	100	67.376	Oreochromis_niloticus
ENSELUG00000008849	-	99	46.823	ENSORLG00000001620	-	88	44.839	Oryzias_latipes
ENSELUG00000008849	-	100	61.672	ENSORLG00020011942	alyref	100	70.819	Oryzias_latipes_hni
ENSELUG00000008849	-	99	52.874	ENSORLG00020015673	-	98	49.615	Oryzias_latipes_hni
ENSELUG00000008849	-	100	62.105	ENSORLG00015022664	alyref	100	68.817	Oryzias_latipes_hsok
ENSELUG00000008849	-	99	54.023	ENSORLG00015015143	-	98	52.308	Oryzias_latipes_hsok
ENSELUG00000008849	-	99	54.826	ENSOMEG00000007158	-	97	51.292	Oryzias_melastigma
ENSELUG00000008849	-	100	70.714	ENSOMEG00000019176	alyref	100	70.714	Oryzias_melastigma
ENSELUG00000008849	-	88	57.490	ENSPPAG00000036403	-	72	65.686	Pan_paniscus
ENSELUG00000008849	-	99	66.182	ENSPKIG00000006233	-	81	63.806	Paramormyrops_kingsleyae
ENSELUG00000008849	-	100	64.413	ENSPKIG00000007070	alyref	100	64.769	Paramormyrops_kingsleyae
ENSELUG00000008849	-	99	61.818	ENSPMGG00000016600	alyref	91	61.871	Periophthalmus_magnuspinnatus
ENSELUG00000008849	-	64	58.480	ENSPMGG00000012994	-	93	55.030	Periophthalmus_magnuspinnatus
ENSELUG00000008849	-	100	59.144	ENSPEMG00000016628	-	100	59.922	Peromyscus_maniculatus_bairdii
ENSELUG00000008849	-	100	53.532	ENSPFOG00000017094	-	100	51.311	Poecilia_formosa
ENSELUG00000008849	-	100	65.493	ENSPFOG00000022825	alyref	99	64.437	Poecilia_formosa
ENSELUG00000008849	-	100	53.532	ENSPLAG00000014380	-	100	51.311	Poecilia_latipinna
ENSELUG00000008849	-	100	65.724	ENSPLAG00000006948	alyref	100	65.371	Poecilia_latipinna
ENSELUG00000008849	-	100	65.493	ENSPMEG00000003547	alyref	100	64.437	Poecilia_mexicana
ENSELUG00000008849	-	100	53.532	ENSPMEG00000023039	-	100	51.311	Poecilia_mexicana
ENSELUG00000008849	-	100	55.849	ENSPREG00000003649	-	100	53.208	Poecilia_reticulata
ENSELUG00000008849	-	100	65.724	ENSPREG00000015795	alyref	100	66.078	Poecilia_reticulata
ENSELUG00000008849	-	100	62.724	ENSPNYG00000017498	alyref	100	70.968	Pundamilia_nyererei
ENSELUG00000008849	-	99	58.647	ENSPNYG00000002879	-	98	58.271	Pundamilia_nyererei
ENSELUG00000008849	-	100	65.603	ENSPNAG00000002531	alyref	100	65.957	Pygocentrus_nattereri
ENSELUG00000008849	-	79	66.667	ENSSBOG00000030924	-	87	65.517	Saimiri_boliviensis_boliviensis
ENSELUG00000008849	-	99	49.275	ENSSHAG00000012866	-	99	47.292	Sarcophilus_harrisii
ENSELUG00000008849	-	99	52.549	ENSSHAG00000000609	-	99	49.808	Sarcophilus_harrisii
ENSELUG00000008849	-	76	68.205	ENSSFOG00015003678	alyref	83	64.615	Scleropages_formosus
ENSELUG00000008849	-	85	70.320	ENSSFOG00015003923	alyref	73	68.950	Scleropages_formosus
ENSELUG00000008849	-	100	63.475	ENSSMAG00000009283	alyref	100	64.894	Scophthalmus_maximus
ENSELUG00000008849	-	100	59.551	ENSSMAG00000011169	-	100	59.341	Scophthalmus_maximus
ENSELUG00000008849	-	100	63.799	ENSSDUG00000016158	alyref	100	69.534	Seriola_dumerili
ENSELUG00000008849	-	100	65.233	ENSSLDG00000017803	alyref	100	68.817	Seriola_lalandi_dorsalis
ENSELUG00000008849	-	99	61.776	ENSSPAG00000017028	-	96	59.846	Stegastes_partitus
ENSELUG00000008849	-	100	55.019	ENSTRUG00000003051	-	100	54.647	Takifugu_rubripes
ENSELUG00000008849	-	100	58.571	ENSTNIG00000011595	alyref	100	60.769	Tetraodon_nigroviridis
ENSELUG00000008849	-	100	55.172	ENSTNIG00000014136	-	100	51.087	Tetraodon_nigroviridis
ENSELUG00000008849	-	77	67.172	ENSVVUG00000000272	-	82	68.020	Vulpes_vulpes
ENSELUG00000008849	-	100	63.604	ENSXCOG00000018047	alyref	99	64.311	Xiphophorus_couchianus
ENSELUG00000008849	-	100	53.558	ENSXMAG00000018086	-	100	51.685	Xiphophorus_maculatus
ENSELUG00000008849	-	100	63.604	ENSXMAG00000012218	alyref	99	64.311	Xiphophorus_maculatus