EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000009039 (Gene tree)
Gene ID: 105018913
Gene Symbol: zgc:153215
Alias: fe11g10|im:6907990|wu:fe11g10
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 6192 bases
Position: chrLG20:27952416-27958607
Accession: 105018913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000008388	RRM_1	PF00076.22	1.1e-21	1	2
ENSELUP00000008388	RRM_1	PF00076.22	1.1e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000005634	-	5959	XM_010884720	ENSELUP00000008388	581 (aa)	XP_010883022	UPI000661C549

Gene Model

Click here to download ENSELUG00000009039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000009039's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000009039	zgc:153215	97	35.614	ENSAPOG00000008836	zgc:153215	98	64.865	Acanthochromis_polyacanthus
ENSELUG00000009039	zgc:153215	96	41.071	ENSACIG00000013317	zgc:153215	99	40.893	Amphilophus_citrinellus
ENSELUG00000009039	zgc:153215	97	40.767	ENSAOCG00000010819	zgc:153215	99	40.522	Amphiprion_ocellaris
ENSELUG00000009039	zgc:153215	75	34.657	ENSAPEG00000022079	rbm12b	99	33.696	Amphiprion_percula
ENSELUG00000009039	zgc:153215	97	41.838	ENSATEG00000001886	zgc:153215	99	41.363	Anabas_testudineus
ENSELUG00000009039	zgc:153215	97	40.760	ENSACLG00000007675	zgc:153215	100	39.828	Astatotilapia_calliptera
ENSELUG00000009039	zgc:153215	54	48.649	ENSACLG00000005578	rbm12b	57	60.000	Astatotilapia_calliptera
ENSELUG00000009039	zgc:153215	91	42.424	ENSAMXG00000020853	zgc:153215	89	42.262	Astyanax_mexicanus
ENSELUG00000009039	zgc:153215	78	36.759	ENSAMXG00000041973	rbm12b	72	35.686	Astyanax_mexicanus
ENSELUG00000009039	zgc:153215	84	32.780	ENSCGRG00001008710	-	53	33.077	Cricetulus_griseus_chok1gshd
ENSELUG00000009039	zgc:153215	76	38.149	ENSCSEG00000001575	-	100	38.149	Cynoglossus_semilaevis
ENSELUG00000009039	zgc:153215	97	30.787	ENSCVAG00000009259	-	100	31.461	Cyprinodon_variegatus
ENSELUG00000009039	zgc:153215	97	35.654	ENSDARG00000055889	zgc:153215	99	34.856	Danio_rerio
ENSELUG00000009039	zgc:153215	97	34.118	ENSDARG00000079717	rbm12b	69	34.496	Danio_rerio
ENSELUG00000009039	zgc:153215	85	33.858	ENSEASG00005016297	RBM12B	54	33.721	Equus_asinus_asinus
ENSELUG00000009039	zgc:153215	96	37.113	ENSFHEG00000014539	zgc:153215	96	37.113	Fundulus_heteroclitus
ENSELUG00000009039	zgc:153215	96	38.790	ENSGAFG00000007845	zgc:153215	98	38.790	Gambusia_affinis
ENSELUG00000009039	zgc:153215	97	33.482	ENSGACG00000008682	rbm12b	72	33.482	Gasterosteus_aculeatus
ENSELUG00000009039	zgc:153215	97	39.179	ENSHBUG00000016150	zgc:153215	86	61.250	Haplochromis_burtoni
ENSELUG00000009039	zgc:153215	83	42.667	ENSIPUG00000019731	zgc:153215	93	42.667	Ictalurus_punctatus
ENSELUG00000009039	zgc:153215	97	30.986	ENSIPUG00000001167	RBM12B	71	30.634	Ictalurus_punctatus
ENSELUG00000009039	zgc:153215	84	34.298	ENSJJAG00000004165	-	53	34.298	Jaculus_jaculus
ENSELUG00000009039	zgc:153215	97	36.475	ENSKMAG00000004958	zgc:153215	99	36.475	Kryptolebias_marmoratus
ENSELUG00000009039	zgc:153215	97	41.799	ENSLBEG00000002597	zgc:153215	99	41.799	Labrus_bergylta
ENSELUG00000009039	zgc:153215	96	31.449	ENSLOCG00000018344	rbm12b	74	30.756	Lepisosteus_oculatus
ENSELUG00000009039	zgc:153215	83	33.466	ENSLAFG00000029949	RBM12B	55	33.465	Loxodonta_africana
ENSELUG00000009039	zgc:153215	97	41.708	ENSMAMG00000012038	zgc:153215	99	42.105	Mastacembelus_armatus
ENSELUG00000009039	zgc:153215	97	38.951	ENSMZEG00005005435	zgc:153215	100	38.498	Maylandia_zebra
ENSELUG00000009039	zgc:153215	85	32.046	ENSMAUG00000021752	-	57	32.692	Mesocricetus_auratus
ENSELUG00000009039	zgc:153215	76	68.750	ENSMMOG00000003372	zgc:153215	99	42.000	Mola_mola
ENSELUG00000009039	zgc:153215	81	56.098	ENSMMOG00000002404	rbm12b	66	57.692	Mola_mola
ENSELUG00000009039	zgc:153215	97	40.426	ENSMALG00000001222	zgc:153215	99	39.539	Monopterus_albus
ENSELUG00000009039	zgc:153215	97	30.366	ENSMUSG00000046667	Rbm12b1	58	30.366	Mus_musculus
ENSELUG00000009039	zgc:153215	97	30.366	ENSMUSG00000052137	Rbm12b2	58	30.366	Mus_musculus
ENSELUG00000009039	zgc:153215	97	39.428	ENSNBRG00000013644	zgc:153215	100	40.065	Neolamprologus_brichardi
ENSELUG00000009039	zgc:153215	97	40.823	ENSONIG00000006054	zgc:153215	100	40.823	Oreochromis_niloticus
ENSELUG00000009039	zgc:153215	90	36.667	ENSOMEG00000004220	zgc:153215	96	42.049	Oryzias_melastigma
ENSELUG00000009039	zgc:153215	97	34.321	ENSPKIG00000014851	zgc:153215	99	34.146	Paramormyrops_kingsleyae
ENSELUG00000009039	zgc:153215	81	33.333	ENSPSIG00000001348	RBM12B	67	33.333	Pelodiscus_sinensis
ENSELUG00000009039	zgc:153215	85	63.736	ENSPFOG00000017451	zgc:153215	67	67.500	Poecilia_formosa
ENSELUG00000009039	zgc:153215	97	32.222	ENSPFOG00000020937	rbm12b	71	32.963	Poecilia_formosa
ENSELUG00000009039	zgc:153215	97	33.511	ENSPLAG00000000232	zgc:153215	93	70.423	Poecilia_latipinna
ENSELUG00000009039	zgc:153215	83	68.354	ENSPMEG00000016662	zgc:153215	94	68.354	Poecilia_mexicana
ENSELUG00000009039	zgc:153215	97	37.786	ENSPREG00000018608	zgc:153215	99	37.786	Poecilia_reticulata
ENSELUG00000009039	zgc:153215	71	59.341	ENSPNYG00000018125	zgc:153215	96	61.250	Pundamilia_nyererei
ENSELUG00000009039	zgc:153215	97	36.364	ENSPNAG00000025628	zgc:153215	99	36.039	Pygocentrus_nattereri
ENSELUG00000009039	zgc:153215	78	36.965	ENSPNAG00000008126	rbm12b	67	37.308	Pygocentrus_nattereri
ENSELUG00000009039	zgc:153215	97	30.389	ENSSFOG00015001584	rbm12b	73	30.351	Scleropages_formosus
ENSELUG00000009039	zgc:153215	97	42.291	ENSSFOG00015009427	zgc:153215	99	36.189	Scleropages_formosus
ENSELUG00000009039	zgc:153215	97	41.343	ENSSMAG00000019013	zgc:153215	97	41.343	Scophthalmus_maximus
ENSELUG00000009039	zgc:153215	97	41.391	ENSSDUG00000012545	zgc:153215	99	41.391	Seriola_dumerili
ENSELUG00000009039	zgc:153215	97	40.219	ENSSLDG00000013581	zgc:153215	99	40.219	Seriola_lalandi_dorsalis
ENSELUG00000009039	zgc:153215	97	30.662	ENSSARG00000011845	-	66	30.662	Sorex_araneus
ENSELUG00000009039	zgc:153215	98	48.193	ENSSPAG00000023584	zgc:153215	100	32.525	Stegastes_partitus
ENSELUG00000009039	zgc:153215	76	36.842	ENSTNIG00000018374	-	99	36.842	Tetraodon_nigroviridis
ENSELUG00000009039	zgc:153215	85	34.252	ENSUAMG00000023639	RBM12B	53	33.878	Ursus_americanus
ENSELUG00000009039	zgc:153215	97	30.769	ENSXETG00000025920	-	63	34.177	Xenopus_tropicalis
ENSELUG00000009039	zgc:153215	97	38.407	ENSXCOG00000019654	zgc:153215	98	38.407	Xiphophorus_couchianus
ENSELUG00000009039	zgc:153215	69	54.651	ENSXMAG00000013169	-	86	62.319	Xiphophorus_maculatus