EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000009258 (Gene tree)
Gene ID: 105007526
Gene Symbol: -
Alias: -
Full Name: oocyte zinc finger protein XlCOF26
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 7000 bases
Position: chrLG10:90879-97878
Accession: 105007526
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000008631	zf-C2H2	PF00096.26	2.4e-33	1	5
ENSELUP00000008631	zf-C2H2	PF00096.26	2.4e-33	2	5
ENSELUP00000008631	zf-C2H2	PF00096.26	2.4e-33	3	5
ENSELUP00000008631	zf-C2H2	PF00096.26	2.4e-33	4	5
ENSELUP00000008631	zf-C2H2	PF00096.26	2.4e-33	5	5
ENSELUP00000008631	zf-met	PF12874.7	1.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000005241	-	3226	XM_010866489	ENSELUP00000008631	334 (aa)	XP_010864791	UPI0005763932

Gene Model

Click here to download ENSELUG00000009258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000009258's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000009258	-	95	48.409	ENSELUG00000020907	-	98	45.295

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000009258	-	98	50.124	ENSAMXG00000038507	-	98	50.124	Astyanax_mexicanus
ENSELUG00000009258	-	79	44.912	ENSCSEG00000012798	-	99	44.912	Cynoglossus_semilaevis
ENSELUG00000009258	-	99	55.172	ENSFHEG00000005807	-	89	42.896	Fundulus_heteroclitus
ENSELUG00000009258	-	97	46.944	ENSGAFG00000003348	-	97	42.647	Gambusia_affinis
ENSELUG00000009258	-	100	45.854	ENSIPUG00000002513	-	100	46.635	Ictalurus_punctatus
ENSELUG00000009258	-	100	48.068	ENSKMAG00000014028	-	93	47.596	Kryptolebias_marmoratus
ENSELUG00000009258	-	97	42.439	ENSMMOG00000009859	-	90	44.149	Mola_mola
ENSELUG00000009258	-	100	44.418	ENSORLG00000023072	-	100	41.412	Oryzias_latipes
ENSELUG00000009258	-	100	43.914	ENSORLG00020002684	-	90	44.828	Oryzias_latipes_hni
ENSELUG00000009258	-	100	44.869	ENSORLG00015018897	-	100	42.553	Oryzias_latipes_hsok
ENSELUG00000009258	-	100	43.914	ENSOMEG00000010520	-	95	44.893	Oryzias_melastigma
ENSELUG00000009258	-	97	46.715	ENSPLAG00000005849	-	97	46.715	Poecilia_latipinna
ENSELUG00000009258	-	97	46.845	ENSPMEG00000020957	-	97	43.032	Poecilia_mexicana
ENSELUG00000009258	-	97	46.715	ENSPREG00000007939	-	97	43.171	Poecilia_reticulata
ENSELUG00000009258	-	98	51.111	ENSPNAG00000003839	-	98	52.228	Pygocentrus_nattereri
ENSELUG00000009258	-	100	54.187	ENSSFOG00015019679	-	100	46.472	Scleropages_formosus
ENSELUG00000009258	-	97	46.618	ENSXCOG00000015432	-	97	41.787	Xiphophorus_couchianus
ENSELUG00000009258	-	98	46.506	ENSXMAG00000029995	-	87	41.787	Xiphophorus_maculatus