EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000009275 (Gene tree)
Gene ID: 105026520
Gene Symbol: rtcb
Alias: zgc:76871
Full Name: RNA 2'%2C3'-cyclic phosphate and 5'-OH ligase
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 4120 bases
Position: chrLG14:33901439-33905558
Accession: 105026520
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000031651	RtcB	PF01139.17	5.7e-121	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000005226	-	1536	XM_013131401	ENSELUP00000031651	511 (aa)	XP_012986855	-

Gene Model

Click here to download ENSELUG00000009275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000009275's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000009275	rtcb	100	82.798	ENSG00000100220	RTCB	100	82.798	Homo_sapiens
ENSELUG00000009275	rtcb	100	83.554	ENSAPOG00000006040	rtcb	100	83.554	Acanthochromis_polyacanthus
ENSELUG00000009275	rtcb	100	82.798	ENSAMEG00000016152	RTCB	100	82.798	Ailuropoda_melanoleuca
ENSELUG00000009275	rtcb	100	78.639	ENSACIG00000009083	rtcb	100	78.639	Amphilophus_citrinellus
ENSELUG00000009275	rtcb	100	83.554	ENSAOCG00000005662	rtcb	100	83.554	Amphiprion_ocellaris
ENSELUG00000009275	rtcb	96	78.474	ENSAPEG00000024653	rtcb	100	78.474	Amphiprion_percula
ENSELUG00000009275	rtcb	100	83.554	ENSAPEG00000024701	rtcb	100	83.554	Amphiprion_percula
ENSELUG00000009275	rtcb	100	83.554	ENSATEG00000000618	rtcb	100	83.554	Anabas_testudineus
ENSELUG00000009275	rtcb	100	80.110	ENSACAG00000014817	RTCB	100	80.110	Anolis_carolinensis
ENSELUG00000009275	rtcb	100	71.820	ENSANAG00000018191	-	91	71.820	Aotus_nancymaae
ENSELUG00000009275	rtcb	71	94.444	ENSANAG00000023724	-	83	94.444	Aotus_nancymaae
ENSELUG00000009275	rtcb	100	82.420	ENSACLG00000008367	rtcb	100	82.420	Astatotilapia_calliptera
ENSELUG00000009275	rtcb	100	84.310	ENSAMXG00000042320	rtcb	100	84.310	Astyanax_mexicanus
ENSELUG00000009275	rtcb	100	82.798	ENSBTAG00000011070	RTCB	100	82.798	Bos_taurus
ENSELUG00000009275	rtcb	100	64.839	WBGene00008877	rtcb-1	100	64.839	Caenorhabditis_elegans
ENSELUG00000009275	rtcb	100	82.609	ENSCJAG00000006128	RTCB	100	82.609	Callithrix_jacchus
ENSELUG00000009275	rtcb	100	78.450	ENSCAFG00000010789	-	100	78.450	Canis_familiaris
ENSELUG00000009275	rtcb	100	82.798	ENSCAFG00000001785	RTCB	100	82.798	Canis_familiaris
ENSELUG00000009275	rtcb	87	77.155	ENSCAFG00020018953	-	99	77.155	Canis_lupus_dingo
ENSELUG00000009275	rtcb	100	82.798	ENSCAFG00020004890	-	100	82.798	Canis_lupus_dingo
ENSELUG00000009275	rtcb	100	82.798	ENSCHIG00000027009	-	100	82.798	Capra_hircus
ENSELUG00000009275	rtcb	100	82.987	ENSTSYG00000012320	RTCB	100	82.987	Carlito_syrichta
ENSELUG00000009275	rtcb	95	82.036	ENSCAPG00000011647	RTCB	96	82.036	Cavia_aperea
ENSELUG00000009275	rtcb	100	82.609	ENSCCAG00000000618	RTCB	100	82.609	Cebus_capucinus
ENSELUG00000009275	rtcb	100	82.609	ENSCATG00000033424	RTCB	100	82.609	Cercocebus_atys
ENSELUG00000009275	rtcb	100	82.609	ENSCLAG00000007997	RTCB	100	82.609	Chinchilla_lanigera
ENSELUG00000009275	rtcb	100	82.420	ENSCSAG00000008351	RTCB	100	82.420	Chlorocebus_sabaeus
ENSELUG00000009275	rtcb	100	69.376	ENSCHOG00000009123	RTCB	100	69.376	Choloepus_hoffmanni
ENSELUG00000009275	rtcb	100	82.987	ENSCPBG00000023184	RTCB	100	82.987	Chrysemys_picta_bellii
ENSELUG00000009275	rtcb	100	71.645	ENSCING00000003830	-	100	71.645	Ciona_intestinalis
ENSELUG00000009275	rtcb	100	71.645	ENSCSAVG00000008124	-	99	71.645	Ciona_savignyi
ENSELUG00000009275	rtcb	100	79.206	ENSCANG00000001891	RTCB	100	79.206	Colobus_angolensis_palliatus
ENSELUG00000009275	rtcb	100	82.798	ENSCGRG00001011173	Rtcb	100	82.798	Cricetulus_griseus_chok1gshd
ENSELUG00000009275	rtcb	93	82.020	ENSCGRG00000009587	-	96	82.020	Cricetulus_griseus_crigri
ENSELUG00000009275	rtcb	100	82.609	ENSCSEG00000003986	rtcb	100	82.609	Cynoglossus_semilaevis
ENSELUG00000009275	rtcb	81	80.876	ENSCVAG00000000569	rtcb	93	80.876	Cyprinodon_variegatus
ENSELUG00000009275	rtcb	100	84.121	ENSDARG00000101047	rtcb	100	84.121	Danio_rerio
ENSELUG00000009275	rtcb	71	87.328	ENSDNOG00000012425	RTCB	87	87.328	Dasypus_novemcinctus
ENSELUG00000009275	rtcb	100	82.798	ENSDORG00000010855	Rtcb	100	82.798	Dipodomys_ordii
ENSELUG00000009275	rtcb	99	73.624	FBgn0032781	RtcB	99	73.624	Drosophila_melanogaster
ENSELUG00000009275	rtcb	100	82.136	ENSETEG00000001988	RTCB	100	82.136	Echinops_telfairi
ENSELUG00000009275	rtcb	100	80.431	ENSEBUG00000014235	rtcb	100	80.431	Eptatretus_burgeri
ENSELUG00000009275	rtcb	100	82.987	ENSEASG00005019059	RTCB	100	82.987	Equus_asinus_asinus
ENSELUG00000009275	rtcb	100	82.987	ENSECAG00000023998	RTCB	100	82.987	Equus_caballus
ENSELUG00000009275	rtcb	88	73.191	ENSEEUG00000006251	RTCB	99	73.191	Erinaceus_europaeus
ENSELUG00000009275	rtcb	100	82.798	ENSFCAG00000026480	RTCB	100	82.798	Felis_catus
ENSELUG00000009275	rtcb	100	83.932	ENSFALG00000013334	RTCB	100	83.932	Ficedula_albicollis
ENSELUG00000009275	rtcb	100	82.609	ENSFDAG00000018150	RTCB	100	82.609	Fukomys_damarensis
ENSELUG00000009275	rtcb	100	82.798	ENSFHEG00000009595	rtcb	100	82.798	Fundulus_heteroclitus
ENSELUG00000009275	rtcb	100	82.609	ENSGMOG00000018882	rtcb	100	82.609	Gadus_morhua
ENSELUG00000009275	rtcb	100	83.365	ENSGALG00000012611	RTCB	100	83.365	Gallus_gallus
ENSELUG00000009275	rtcb	100	82.609	ENSGAFG00000004198	rtcb	100	82.609	Gambusia_affinis
ENSELUG00000009275	rtcb	100	83.932	ENSGACG00000000586	rtcb	100	83.932	Gasterosteus_aculeatus
ENSELUG00000009275	rtcb	93	81.174	ENSGAGG00000019133	RTCB	98	81.174	Gopherus_agassizii
ENSELUG00000009275	rtcb	100	82.798	ENSGGOG00000011402	RTCB	100	82.798	Gorilla_gorilla
ENSELUG00000009275	rtcb	100	82.420	ENSHBUG00000020571	rtcb	100	82.420	Haplochromis_burtoni
ENSELUG00000009275	rtcb	94	60.251	ENSHGLG00000001066	-	99	60.251	Heterocephalus_glaber_female
ENSELUG00000009275	rtcb	100	82.609	ENSHGLG00000004492	RTCB	100	82.609	Heterocephalus_glaber_female
ENSELUG00000009275	rtcb	100	82.609	ENSHGLG00100008965	RTCB	100	82.609	Heterocephalus_glaber_male
ENSELUG00000009275	rtcb	100	81.921	ENSHCOG00000006450	rtcb	100	81.921	Hippocampus_comes
ENSELUG00000009275	rtcb	100	83.743	ENSIPUG00000015443	rtcb	100	83.743	Ictalurus_punctatus
ENSELUG00000009275	rtcb	100	82.609	ENSSTOG00000003878	RTCB	100	82.609	Ictidomys_tridecemlineatus
ENSELUG00000009275	rtcb	100	82.987	ENSJJAG00000010667	Rtcb	100	82.987	Jaculus_jaculus
ENSELUG00000009275	rtcb	100	82.609	ENSKMAG00000013178	rtcb	100	82.609	Kryptolebias_marmoratus
ENSELUG00000009275	rtcb	100	83.554	ENSLBEG00000010566	RTCB	100	83.554	Labrus_bergylta
ENSELUG00000009275	rtcb	100	83.743	ENSLBEG00000000214	rtcb	100	83.743	Labrus_bergylta
ENSELUG00000009275	rtcb	100	82.609	ENSLACG00000013033	RTCB	100	82.609	Latimeria_chalumnae
ENSELUG00000009275	rtcb	100	84.499	ENSLOCG00000016515	rtcb	99	84.499	Lepisosteus_oculatus
ENSELUG00000009275	rtcb	100	82.609	ENSLAFG00000002082	RTCB	100	82.609	Loxodonta_africana
ENSELUG00000009275	rtcb	100	82.420	ENSMFAG00000034419	RTCB	100	82.420	Macaca_fascicularis
ENSELUG00000009275	rtcb	100	82.420	ENSMMUG00000006720	RTCB	100	82.420	Macaca_mulatta
ENSELUG00000009275	rtcb	100	82.420	ENSMNEG00000040669	RTCB	100	82.420	Macaca_nemestrina
ENSELUG00000009275	rtcb	100	82.609	ENSMLEG00000040505	RTCB	100	82.609	Mandrillus_leucophaeus
ENSELUG00000009275	rtcb	100	83.176	ENSMAMG00000020676	rtcb	100	83.176	Mastacembelus_armatus
ENSELUG00000009275	rtcb	100	82.420	ENSMZEG00005018942	rtcb	100	82.420	Maylandia_zebra
ENSELUG00000009275	rtcb	100	83.051	ENSMGAG00000012805	RTCB	100	83.051	Meleagris_gallopavo
ENSELUG00000009275	rtcb	59	98.230	ENSMAUG00000008301	Rtcb	100	98.230	Mesocricetus_auratus
ENSELUG00000009275	rtcb	100	67.311	ENSMICG00000036677	-	100	67.311	Microcebus_murinus
ENSELUG00000009275	rtcb	100	82.609	ENSMICG00000013303	-	100	82.609	Microcebus_murinus
ENSELUG00000009275	rtcb	100	83.176	ENSMOCG00000002440	Rtcb	100	83.176	Microtus_ochrogaster
ENSELUG00000009275	rtcb	100	83.743	ENSMMOG00000005987	rtcb	100	83.743	Mola_mola
ENSELUG00000009275	rtcb	100	83.554	ENSMODG00000001414	RTCB	100	83.554	Monodelphis_domestica
ENSELUG00000009275	rtcb	100	82.798	ENSMALG00000007603	rtcb	100	82.798	Monopterus_albus
ENSELUG00000009275	rtcb	100	82.798	MGP_CAROLIEiJ_G0015689	Rtcb	100	82.798	Mus_caroli
ENSELUG00000009275	rtcb	100	82.798	ENSMUSG00000001783	Rtcb	100	82.798	Mus_musculus
ENSELUG00000009275	rtcb	100	82.798	MGP_PahariEiJ_G0031396	Rtcb	100	82.798	Mus_pahari
ENSELUG00000009275	rtcb	100	82.798	MGP_SPRETEiJ_G0016507	Rtcb	100	82.798	Mus_spretus
ENSELUG00000009275	rtcb	100	82.798	ENSMPUG00000012285	RTCB	100	82.798	Mustela_putorius_furo
ENSELUG00000009275	rtcb	100	80.226	ENSMLUG00000007803	RTCB	100	80.226	Myotis_lucifugus
ENSELUG00000009275	rtcb	71	97.333	ENSNGAG00000005093	Rtcb	100	97.333	Nannospalax_galili
ENSELUG00000009275	rtcb	100	82.609	ENSNBRG00000017202	rtcb	100	82.609	Neolamprologus_brichardi
ENSELUG00000009275	rtcb	100	82.798	ENSNLEG00000004960	RTCB	100	82.798	Nomascus_leucogenys
ENSELUG00000009275	rtcb	86	98.214	ENSMEUG00000007809	-	87	98.214	Notamacropus_eugenii
ENSELUG00000009275	rtcb	71	97.500	ENSOPRG00000003488	RTCB	78	97.500	Ochotona_princeps
ENSELUG00000009275	rtcb	74	98.113	ENSODEG00000013033	-	100	98.113	Octodon_degus
ENSELUG00000009275	rtcb	100	54.631	ENSODEG00000005042	-	100	54.631	Octodon_degus
ENSELUG00000009275	rtcb	100	83.554	ENSONIG00000007474	rtcb	100	83.554	Oreochromis_niloticus
ENSELUG00000009275	rtcb	100	83.365	ENSOANG00000005524	RTCB	100	83.365	Ornithorhynchus_anatinus
ENSELUG00000009275	rtcb	93	81.781	ENSOCUG00000008270	RTCB	96	81.781	Oryctolagus_cuniculus
ENSELUG00000009275	rtcb	100	83.365	ENSORLG00000020093	rtcb	100	83.365	Oryzias_latipes
ENSELUG00000009275	rtcb	100	83.365	ENSORLG00020003706	rtcb	100	83.365	Oryzias_latipes_hni
ENSELUG00000009275	rtcb	100	83.554	ENSORLG00015002968	rtcb	100	83.554	Oryzias_latipes_hsok
ENSELUG00000009275	rtcb	100	82.798	ENSOMEG00000021278	rtcb	100	82.798	Oryzias_melastigma
ENSELUG00000009275	rtcb	100	82.042	ENSOGAG00000001425	RTCB	100	82.042	Otolemur_garnettii
ENSELUG00000009275	rtcb	100	82.798	ENSOARG00000018008	RTCB	100	82.798	Ovis_aries
ENSELUG00000009275	rtcb	100	82.798	ENSPPAG00000028667	RTCB	100	82.798	Pan_paniscus
ENSELUG00000009275	rtcb	100	82.798	ENSPPRG00000004038	RTCB	100	82.798	Panthera_pardus
ENSELUG00000009275	rtcb	94	80.762	ENSPTIG00000020499	RTCB	97	80.762	Panthera_tigris_altaica
ENSELUG00000009275	rtcb	100	82.798	ENSPTRG00000014287	RTCB	100	82.798	Pan_troglodytes
ENSELUG00000009275	rtcb	100	82.420	ENSPANG00000016035	RTCB	100	82.420	Papio_anubis
ENSELUG00000009275	rtcb	100	83.365	ENSPKIG00000001881	rtcb	100	83.365	Paramormyrops_kingsleyae
ENSELUG00000009275	rtcb	91	81.818	ENSPSIG00000011690	RTCB	100	81.818	Pelodiscus_sinensis
ENSELUG00000009275	rtcb	100	83.176	ENSPMGG00000016672	rtcb	100	83.176	Periophthalmus_magnuspinnatus
ENSELUG00000009275	rtcb	100	82.798	ENSPEMG00000019548	Rtcb	100	82.798	Peromyscus_maniculatus_bairdii
ENSELUG00000009275	rtcb	100	79.395	ENSPMAG00000005657	rtcb	100	79.395	Petromyzon_marinus
ENSELUG00000009275	rtcb	100	83.554	ENSPCIG00000009467	RTCB	100	83.554	Phascolarctos_cinereus
ENSELUG00000009275	rtcb	100	82.987	ENSPFOG00000003058	rtcb	100	82.987	Poecilia_formosa
ENSELUG00000009275	rtcb	100	83.176	ENSPLAG00000017663	rtcb	100	83.176	Poecilia_latipinna
ENSELUG00000009275	rtcb	100	82.987	ENSPMEG00000006227	rtcb	100	82.987	Poecilia_mexicana
ENSELUG00000009275	rtcb	100	82.798	ENSPREG00000018467	rtcb	100	82.798	Poecilia_reticulata
ENSELUG00000009275	rtcb	100	82.798	ENSPPYG00000011752	RTCB	100	82.798	Pongo_abelii
ENSELUG00000009275	rtcb	93	67.677	ENSPCAG00000013641	RTCB	100	67.677	Procavia_capensis
ENSELUG00000009275	rtcb	100	82.609	ENSPCOG00000017243	RTCB	100	82.609	Propithecus_coquereli
ENSELUG00000009275	rtcb	93	81.174	ENSPVAG00000002380	RTCB	100	81.174	Pteropus_vampyrus
ENSELUG00000009275	rtcb	100	82.420	ENSPNYG00000022760	rtcb	100	82.420	Pundamilia_nyererei
ENSELUG00000009275	rtcb	100	83.932	ENSPNAG00000009209	rtcb	100	83.932	Pygocentrus_nattereri
ENSELUG00000009275	rtcb	100	82.798	ENSRNOG00000004813	Rtcb	100	82.798	Rattus_norvegicus
ENSELUG00000009275	rtcb	100	74.858	ENSRBIG00000042090	RTCB	100	74.858	Rhinopithecus_bieti
ENSELUG00000009275	rtcb	100	78.352	ENSSBOG00000020085	-	100	78.352	Saimiri_boliviensis_boliviensis
ENSELUG00000009275	rtcb	94	82.530	ENSSHAG00000016277	RTCB	100	82.530	Sarcophilus_harrisii
ENSELUG00000009275	rtcb	100	84.483	ENSSFOG00015011572	RTCB	100	84.483	Scleropages_formosus
ENSELUG00000009275	rtcb	100	82.420	ENSSFOG00015000763	rtcb	100	82.420	Scleropages_formosus
ENSELUG00000009275	rtcb	100	81.096	ENSSMAG00000005096	rtcb	100	81.096	Scophthalmus_maximus
ENSELUG00000009275	rtcb	100	82.987	ENSSDUG00000012605	rtcb	100	82.987	Seriola_dumerili
ENSELUG00000009275	rtcb	100	82.987	ENSSLDG00000019458	rtcb	100	82.987	Seriola_lalandi_dorsalis
ENSELUG00000009275	rtcb	65	97.143	ENSSARG00000004799	-	70	97.143	Sorex_araneus
ENSELUG00000009275	rtcb	100	82.042	ENSSPUG00000012814	RTCB	100	82.042	Sphenodon_punctatus
ENSELUG00000009275	rtcb	100	83.554	ENSSPAG00000004623	rtcb	100	83.554	Stegastes_partitus
ENSELUG00000009275	rtcb	100	82.798	ENSSSCG00000000158	RTCB	100	82.798	Sus_scrofa
ENSELUG00000009275	rtcb	100	83.932	ENSTGUG00000010947	RTCB	99	83.932	Taeniopygia_guttata
ENSELUG00000009275	rtcb	91	82.851	ENSTRUG00000009880	rtcb	100	90.964	Takifugu_rubripes
ENSELUG00000009275	rtcb	100	82.231	ENSTNIG00000002484	rtcb	100	82.231	Tetraodon_nigroviridis
ENSELUG00000009275	rtcb	100	70.699	ENSTBEG00000004418	RTCB	100	70.699	Tupaia_belangeri
ENSELUG00000009275	rtcb	93	80.972	ENSTTRG00000006417	RTCB	100	80.972	Tursiops_truncatus
ENSELUG00000009275	rtcb	100	82.798	ENSUAMG00000022792	RTCB	100	82.798	Ursus_americanus
ENSELUG00000009275	rtcb	100	82.798	ENSUMAG00000017225	RTCB	100	82.798	Ursus_maritimus
ENSELUG00000009275	rtcb	100	82.609	ENSVPAG00000005375	RTCB	100	82.609	Vicugna_pacos
ENSELUG00000009275	rtcb	100	82.798	ENSVVUG00000023408	RTCB	100	82.798	Vulpes_vulpes
ENSELUG00000009275	rtcb	100	82.042	ENSXETG00000011523	rtcb	100	82.042	Xenopus_tropicalis
ENSELUG00000009275	rtcb	100	82.609	ENSXMAG00000002855	rtcb	100	82.609	Xiphophorus_maculatus