EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000009287 (Gene tree)
Gene ID: 105018922
Gene Symbol: rad54b
Alias: im:7137737|im:7153525
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 18138 bases
Position: chrLG20:27883336-27901473
Accession: 105018922
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000031667	ResIII	PF04851.15	6.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000005185	-	3694	XM_010884731	ENSELUP00000031667	930 (aa)	XP_010883033	UPI000576F061

Gene Model

Click here to download ENSELUG00000009287's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000009287's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000009287	rad54b	52	31.061	ENSELUG00000019154	smarcad1b	51	31.061
ENSELUG00000009287	rad54b	70	44.495	ENSELUG00000002295	rad54l	84	44.562

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000009287	rad54b	99	53.887	ENSG00000197275	RAD54B	99	53.936	Homo_sapiens
ENSELUG00000009287	rad54b	77	59.097	ENSG00000265817	FSBP	99	59.097	Homo_sapiens
ENSELUG00000009287	rad54b	99	54.025	ENSAMEG00000005834	-	99	54.025	Ailuropoda_melanoleuca
ENSELUG00000009287	rad54b	91	78.294	ENSACIG00000013005	rad54b	96	78.294	Amphilophus_citrinellus
ENSELUG00000009287	rad54b	100	72.996	ENSAOCG00000008523	rad54b	100	72.785	Amphiprion_ocellaris
ENSELUG00000009287	rad54b	100	67.769	ENSAPEG00000001673	rad54b	100	67.983	Amphiprion_percula
ENSELUG00000009287	rad54b	100	72.689	ENSATEG00000001527	rad54b	100	72.899	Anabas_testudineus
ENSELUG00000009287	rad54b	99	55.765	ENSAPLG00000014366	-	99	55.660	Anas_platyrhynchos
ENSELUG00000009287	rad54b	83	59.949	ENSACAG00000003671	-	97	59.949	Anolis_carolinensis
ENSELUG00000009287	rad54b	69	60.769	ENSANAG00000019528	-	99	60.769	Aotus_nancymaae
ENSELUG00000009287	rad54b	90	79.267	ENSACLG00000007826	rad54b	98	79.267	Astatotilapia_calliptera
ENSELUG00000009287	rad54b	84	67.170	ENSAMXG00000039985	rad54b	95	66.833	Astyanax_mexicanus
ENSELUG00000009287	rad54b	99	54.140	ENSBTAG00000000632	RAD54B	99	54.100	Bos_taurus
ENSELUG00000009287	rad54b	75	35.431	WBGene00013792	Y116A8C.13	86	34.545	Caenorhabditis_elegans
ENSELUG00000009287	rad54b	99	53.613	ENSCJAG00000000080	-	99	58.872	Callithrix_jacchus
ENSELUG00000009287	rad54b	99	54.286	ENSCAFG00000009179	RAD54B	99	54.074	Canis_familiaris
ENSELUG00000009287	rad54b	99	54.286	ENSCAFG00020012084	-	99	54.074	Canis_lupus_dingo
ENSELUG00000009287	rad54b	99	53.961	ENSCHIG00000008230	-	99	53.583	Capra_hircus
ENSELUG00000009287	rad54b	99	53.757	ENSTSYG00000013234	-	99	53.545	Carlito_syrichta
ENSELUG00000009287	rad54b	99	53.277	ENSCPOG00000011643	-	99	53.277	Cavia_porcellus
ENSELUG00000009287	rad54b	99	54.228	ENSCCAG00000011754	-	99	59.041	Cebus_capucinus
ENSELUG00000009287	rad54b	99	53.846	ENSCATG00000030661	-	99	58.985	Cercocebus_atys
ENSELUG00000009287	rad54b	99	53.098	ENSCLAG00000010476	-	99	52.766	Chinchilla_lanigera
ENSELUG00000009287	rad54b	99	53.846	ENSCSAG00000012712	-	99	53.635	Chlorocebus_sabaeus
ENSELUG00000009287	rad54b	99	54.735	ENSCPBG00000003204	-	98	56.349	Chrysemys_picta_bellii
ENSELUG00000009287	rad54b	99	53.774	ENSCANG00000017939	-	99	59.178	Colobus_angolensis_palliatus
ENSELUG00000009287	rad54b	99	52.620	ENSCGRG00001020184	Rad54b	99	52.513	Cricetulus_griseus_chok1gshd
ENSELUG00000009287	rad54b	99	51.872	ENSCGRG00000016752	Rad54b	99	51.765	Cricetulus_griseus_crigri
ENSELUG00000009287	rad54b	93	74.328	ENSCSEG00000001601	rad54b	99	74.328	Cynoglossus_semilaevis
ENSELUG00000009287	rad54b	100	70.085	ENSCVAG00000009200	rad54b	100	70.085	Cyprinodon_variegatus
ENSELUG00000009287	rad54b	99	62.724	ENSDARG00000092134	rad54b	99	67.812	Danio_rerio
ENSELUG00000009287	rad54b	99	53.985	ENSDNOG00000015535	-	99	53.879	Dasypus_novemcinctus
ENSELUG00000009287	rad54b	99	53.723	ENSDORG00000002492	Rad54b	89	59.367	Dipodomys_ordii
ENSELUG00000009287	rad54b	87	55.676	ENSETEG00000010605	-	100	56.106	Echinops_telfairi
ENSELUG00000009287	rad54b	99	46.786	ENSEBUG00000009104	rad54b	99	46.519	Eptatretus_burgeri
ENSELUG00000009287	rad54b	84	58.564	ENSEASG00005004021	-	89	58.564	Equus_asinus_asinus
ENSELUG00000009287	rad54b	99	53.207	ENSECAG00000021949	-	99	53.312	Equus_caballus
ENSELUG00000009287	rad54b	70	51.829	ENSEEUG00000008056	-	72	51.829	Erinaceus_europaeus
ENSELUG00000009287	rad54b	99	53.545	ENSFCAG00000015513	-	99	58.848	Felis_catus
ENSELUG00000009287	rad54b	99	54.478	ENSFALG00000005467	-	99	54.478	Ficedula_albicollis
ENSELUG00000009287	rad54b	99	54.216	ENSFDAG00000020541	-	99	54.216	Fukomys_damarensis
ENSELUG00000009287	rad54b	85	75.819	ENSFHEG00000014382	rad54b	87	75.819	Fundulus_heteroclitus
ENSELUG00000009287	rad54b	84	77.118	ENSGMOG00000014774	rad54b	99	77.118	Gadus_morhua
ENSELUG00000009287	rad54b	99	54.719	ENSGALG00000043597	RAD54B	99	54.719	Gallus_gallus
ENSELUG00000009287	rad54b	99	71.716	ENSGAFG00000007901	rad54b	99	77.068	Gambusia_affinis
ENSELUG00000009287	rad54b	99	71.413	ENSGACG00000009128	rad54b	99	70.913	Gasterosteus_aculeatus
ENSELUG00000009287	rad54b	99	54.745	ENSGAGG00000018747	-	99	54.688	Gopherus_agassizii
ENSELUG00000009287	rad54b	99	53.994	ENSGGOG00000023516	-	99	53.887	Gorilla_gorilla
ENSELUG00000009287	rad54b	99	72.465	ENSHBUG00000016017	rad54b	99	72.417	Haplochromis_burtoni
ENSELUG00000009287	rad54b	99	53.348	ENSHGLG00000008263	RAD54B	85	58.868	Heterocephalus_glaber_female
ENSELUG00000009287	rad54b	99	52.587	ENSHGLG00100008108	-	85	58.052	Heterocephalus_glaber_male
ENSELUG00000009287	rad54b	92	71.606	ENSHCOG00000004764	rad54b	98	69.335	Hippocampus_comes
ENSELUG00000009287	rad54b	99	62.343	ENSIPUG00000018531	rad54b	99	62.343	Ictalurus_punctatus
ENSELUG00000009287	rad54b	84	57.323	ENSSTOG00000010791	-	86	57.323	Ictidomys_tridecemlineatus
ENSELUG00000009287	rad54b	99	53.518	ENSJJAG00000010314	Rad54b	99	53.483	Jaculus_jaculus
ENSELUG00000009287	rad54b	88	75.476	ENSKMAG00000004744	rad54b	96	75.476	Kryptolebias_marmoratus
ENSELUG00000009287	rad54b	80	62.299	ENSLACG00000000859	-	100	62.299	Latimeria_chalumnae
ENSELUG00000009287	rad54b	99	60.950	ENSLOCG00000010100	rad54b	94	66.873	Lepisosteus_oculatus
ENSELUG00000009287	rad54b	84	56.997	ENSLAFG00000015315	-	96	56.997	Loxodonta_africana
ENSELUG00000009287	rad54b	99	53.846	ENSMFAG00000031629	-	99	58.985	Macaca_fascicularis
ENSELUG00000009287	rad54b	99	53.846	ENSMMUG00000005659	-	99	53.635	Macaca_mulatta
ENSELUG00000009287	rad54b	99	53.635	ENSMNEG00000016408	-	99	53.682	Macaca_nemestrina
ENSELUG00000009287	rad54b	99	53.846	ENSMLEG00000006946	-	99	53.635	Mandrillus_leucophaeus
ENSELUG00000009287	rad54b	100	70.095	ENSMAMG00000012269	rad54b	99	70.095	Mastacembelus_armatus
ENSELUG00000009287	rad54b	100	72.187	ENSMZEG00005005281	rad54b	95	79.140	Maylandia_zebra
ENSELUG00000009287	rad54b	99	54.034	ENSMGAG00000012024	-	99	54.034	Meleagris_gallopavo
ENSELUG00000009287	rad54b	99	52.285	ENSMAUG00000013586	Rad54b	89	58.207	Mesocricetus_auratus
ENSELUG00000009287	rad54b	84	59.236	ENSMICG00000000754	-	90	59.236	Microcebus_murinus
ENSELUG00000009287	rad54b	99	52.885	ENSMOCG00000020035	Rad54b	99	52.778	Microtus_ochrogaster
ENSELUG00000009287	rad54b	99	69.486	ENSMMOG00000003394	rad54b	99	69.486	Mola_mola
ENSELUG00000009287	rad54b	85	58.647	ENSMODG00000007343	-	98	58.647	Monodelphis_domestica
ENSELUG00000009287	rad54b	69	78.660	ENSMALG00000001520	rad54b	100	78.660	Monopterus_albus
ENSELUG00000009287	rad54b	99	52.598	MGP_CAROLIEiJ_G0025810	Rad54b	99	52.598	Mus_caroli
ENSELUG00000009287	rad54b	99	52.280	ENSMUSG00000078773	Rad54b	99	52.068	Mus_musculus
ENSELUG00000009287	rad54b	99	52.598	MGP_PahariEiJ_G0023933	Rad54b	99	52.386	Mus_pahari
ENSELUG00000009287	rad54b	99	52.442	MGP_SPRETEiJ_G0026758	Rad54b	99	52.229	Mus_spretus
ENSELUG00000009287	rad54b	84	58.712	ENSMPUG00000008878	-	97	58.712	Mustela_putorius_furo
ENSELUG00000009287	rad54b	99	53.284	ENSMLUG00000008953	-	99	53.178	Myotis_lucifugus
ENSELUG00000009287	rad54b	99	53.079	ENSNGAG00000017537	Rad54b	99	52.904	Nannospalax_galili
ENSELUG00000009287	rad54b	93	78.856	ENSNBRG00000013394	rad54b	99	78.856	Neolamprologus_brichardi
ENSELUG00000009287	rad54b	99	54.083	ENSNLEG00000003062	-	99	59.041	Nomascus_leucogenys
ENSELUG00000009287	rad54b	68	60.859	ENSMEUG00000012426	-	70	60.859	Notamacropus_eugenii
ENSELUG00000009287	rad54b	77	72.093	ENSODEG00000002650	-	96	72.093	Octodon_degus
ENSELUG00000009287	rad54b	99	53.454	ENSODEG00000019564	-	99	53.454	Octodon_degus
ENSELUG00000009287	rad54b	100	73.355	ENSONIG00000006067	rad54b	100	73.248	Oreochromis_niloticus
ENSELUG00000009287	rad54b	80	59.524	ENSOANG00000011348	-	99	59.524	Ornithorhynchus_anatinus
ENSELUG00000009287	rad54b	99	52.710	ENSOCUG00000016478	-	99	52.296	Oryctolagus_cuniculus
ENSELUG00000009287	rad54b	100	70.632	ENSORLG00000008918	rad54b	100	78.295	Oryzias_latipes
ENSELUG00000009287	rad54b	69	78.140	ENSORLG00020012171	rad54b	100	78.140	Oryzias_latipes_hni
ENSELUG00000009287	rad54b	100	70.495	ENSORLG00015018536	rad54b	100	70.285	Oryzias_latipes_hsok
ENSELUG00000009287	rad54b	82	76.554	ENSOMEG00000004345	rad54b	100	76.554	Oryzias_melastigma
ENSELUG00000009287	rad54b	99	52.665	ENSOGAG00000007854	-	99	52.457	Otolemur_garnettii
ENSELUG00000009287	rad54b	84	59.039	ENSOARG00000007691	-	97	59.039	Ovis_aries
ENSELUG00000009287	rad54b	99	52.503	ENSPPAG00000029572	-	99	52.660	Pan_paniscus
ENSELUG00000009287	rad54b	99	53.178	ENSPPRG00000007571	-	99	58.573	Panthera_pardus
ENSELUG00000009287	rad54b	77	58.436	ENSPTIG00000012670	-	99	58.436	Panthera_tigris_altaica
ENSELUG00000009287	rad54b	99	53.781	ENSPTRG00000020427	-	99	58.904	Pan_troglodytes
ENSELUG00000009287	rad54b	99	53.846	ENSPANG00000019566	-	99	53.635	Papio_anubis
ENSELUG00000009287	rad54b	99	63.203	ENSPKIG00000014974	rad54b	99	63.203	Paramormyrops_kingsleyae
ENSELUG00000009287	rad54b	99	54.040	ENSPSIG00000002383	-	95	60.203	Pelodiscus_sinensis
ENSELUG00000009287	rad54b	99	53.666	ENSPEMG00000012133	Rad54b	99	53.560	Peromyscus_maniculatus_bairdii
ENSELUG00000009287	rad54b	84	57.795	ENSPMAG00000002916	rad54b	98	58.048	Petromyzon_marinus
ENSELUG00000009287	rad54b	84	59.669	ENSPCIG00000020151	-	91	59.288	Phascolarctos_cinereus
ENSELUG00000009287	rad54b	99	71.158	ENSPFOG00000023411	rad54b	99	71.099	Poecilia_formosa
ENSELUG00000009287	rad54b	99	70.842	ENSPLAG00000010430	rad54b	99	70.785	Poecilia_latipinna
ENSELUG00000009287	rad54b	99	71.053	ENSPMEG00000016873	rad54b	99	75.410	Poecilia_mexicana
ENSELUG00000009287	rad54b	99	71.792	ENSPREG00000018443	rad54b	99	71.792	Poecilia_reticulata
ENSELUG00000009287	rad54b	99	54.034	ENSPPYG00000018750	-	86	59.217	Pongo_abelii
ENSELUG00000009287	rad54b	99	53.102	ENSPCOG00000026845	-	99	58.483	Propithecus_coquereli
ENSELUG00000009287	rad54b	79	57.810	ENSPVAG00000000261	-	86	57.867	Pteropus_vampyrus
ENSELUG00000009287	rad54b	85	76.884	ENSPNYG00000018303	rad54b	97	76.884	Pundamilia_nyererei
ENSELUG00000009287	rad54b	99	62.830	ENSPNAG00000000295	rad54b	99	62.830	Pygocentrus_nattereri
ENSELUG00000009287	rad54b	99	52.345	ENSRNOG00000039949	Rad54b	88	57.396	Rattus_norvegicus
ENSELUG00000009287	rad54b	99	53.669	ENSRBIG00000020419	-	99	53.459	Rhinopithecus_bieti
ENSELUG00000009287	rad54b	99	53.669	ENSRROG00000039897	-	99	53.459	Rhinopithecus_roxellana
ENSELUG00000009287	rad54b	60	41.080	YBR073W	RDH54	80	36.216	Saccharomyces_cerevisiae
ENSELUG00000009287	rad54b	99	53.927	ENSSBOG00000028501	-	99	53.717	Saimiri_boliviensis_boliviensis
ENSELUG00000009287	rad54b	99	54.307	ENSSHAG00000017038	-	99	54.097	Sarcophilus_harrisii
ENSELUG00000009287	rad54b	61	70.351	ENSSFOG00015008483	rad54b	89	70.351	Scleropages_formosus
ENSELUG00000009287	rad54b	99	72.936	ENSSMAG00000018659	rad54b	97	78.608	Scophthalmus_maximus
ENSELUG00000009287	rad54b	97	72.414	ENSSDUG00000001122	rad54b	97	72.845	Seriola_dumerili
ENSELUG00000009287	rad54b	100	72.508	ENSSLDG00000013787	rad54b	99	74.311	Seriola_lalandi_dorsalis
ENSELUG00000009287	rad54b	99	54.216	ENSSPUG00000016497	-	99	54.216	Sphenodon_punctatus
ENSELUG00000009287	rad54b	100	71.474	ENSSPAG00000012800	rad54b	100	71.902	Stegastes_partitus
ENSELUG00000009287	rad54b	99	53.625	ENSSSCG00000006101	-	98	58.333	Sus_scrofa
ENSELUG00000009287	rad54b	99	54.202	ENSTGUG00000011880	-	99	54.057	Taeniopygia_guttata
ENSELUG00000009287	rad54b	100	70.032	ENSTRUG00000010015	rad54b	99	70.811	Takifugu_rubripes
ENSELUG00000009287	rad54b	99	50.426	ENSTTRG00000006312	-	99	50.533	Tursiops_truncatus
ENSELUG00000009287	rad54b	99	53.919	ENSUMAG00000016401	-	99	53.919	Ursus_maritimus
ENSELUG00000009287	rad54b	99	53.625	ENSVPAG00000003157	-	86	59.470	Vicugna_pacos
ENSELUG00000009287	rad54b	99	46.362	ENSXETG00000025924	rad54b	98	52.055	Xenopus_tropicalis
ENSELUG00000009287	rad54b	99	69.272	ENSXMAG00000013141	rad54b	96	80.000	Xiphophorus_maculatus