EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000009321 (Gene tree)
Gene ID: 105019233
Gene Symbol: tdp2a
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 9612 bases
Position: chrLG20:14378569-14388180
Accession: 105019233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000008638	Exo_endo_phos	PF03372.23	8.2e-11	1	1
ENSELUP00000008664	Exo_endo_phos	PF03372.23	7.3e-09	1	1
ENSELUP00000008667	Exo_endo_phos	PF03372.23	7.3e-09	1	1
ENSELUP00000031682	Exo_endo_phos	PF03372.23	8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000005242	-	1134	-	ENSELUP00000008632	377 (aa)	-	-
ENSELUT00000005142	-	5296	XM_010885252	ENSELUP00000031682	432 (aa)	XP_010883554	UPI000576E883
ENSELUT00000005190	-	5106	-	ENSELUP00000008664	409 (aa)	-	UPI000576C099
ENSELUT00000005227	-	936	-	ENSELUP00000008638	311 (aa)	-	-
ENSELUT00000005178	-	5227	XM_010885253	ENSELUP00000008667	409 (aa)	XP_010883555	UPI000576C099

Gene Model

Click here to download ENSELUG00000009321's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000009321's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000009321	tdp2a	84	49.084	ENSELUG00000016449	tdp2b	82	45.141

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000009321	tdp2a	94	46.333	ENSG00000111802	TDP2	94	46.735	Homo_sapiens
ENSELUG00000009321	tdp2a	77	51.600	ENSAPOG00000018379	-	88	51.600	Acanthochromis_polyacanthus
ENSELUG00000009321	tdp2a	84	46.125	ENSAMEG00000010230	TDP2	96	46.125	Ailuropoda_melanoleuca
ENSELUG00000009321	tdp2a	57	46.809	ENSAOCG00000010081	-	79	47.340	Amphiprion_ocellaris
ENSELUG00000009321	tdp2a	83	47.955	ENSAPEG00000004208	-	90	50.198	Amphiprion_percula
ENSELUG00000009321	tdp2a	84	46.595	ENSATEG00000010663	-	99	45.161	Anabas_testudineus
ENSELUG00000009321	tdp2a	91	47.766	ENSACAG00000002332	TDP2	78	47.766	Anolis_carolinensis
ENSELUG00000009321	tdp2a	85	47.253	ENSANAG00000020033	TDP2	82	44.518	Aotus_nancymaae
ENSELUG00000009321	tdp2a	81	47.893	ENSACLG00000016148	tdp2b	93	47.893	Astatotilapia_calliptera
ENSELUG00000009321	tdp2a	83	47.778	ENSACLG00000016132	tdp2b	98	47.000	Astatotilapia_calliptera
ENSELUG00000009321	tdp2a	95	45.395	ENSACLG00000016174	tdp2b	92	49.084	Astatotilapia_calliptera
ENSELUG00000009321	tdp2a	84	44.981	ENSAMXG00000011775	tdp2b	71	44.981	Astyanax_mexicanus
ENSELUG00000009321	tdp2a	89	53.310	ENSAMXG00000036549	tdp2a	93	53.310	Astyanax_mexicanus
ENSELUG00000009321	tdp2a	85	47.985	ENSBTAG00000000365	TDP2	82	45.215	Bos_taurus
ENSELUG00000009321	tdp2a	76	32.271	WBGene00013405	tdpt-1	67	33.071	Caenorhabditis_elegans
ENSELUG00000009321	tdp2a	85	47.619	ENSCJAG00000006074	TDP2	90	47.273	Callithrix_jacchus
ENSELUG00000009321	tdp2a	85	46.886	ENSCJAG00000021963	-	85	42.271	Callithrix_jacchus
ENSELUG00000009321	tdp2a	85	46.520	ENSCAFG00000010428	TDP2	92	46.863	Canis_familiaris
ENSELUG00000009321	tdp2a	84	46.863	ENSCAFG00020009994	TDP2	92	46.863	Canis_lupus_dingo
ENSELUG00000009321	tdp2a	90	46.233	ENSCHIG00000015294	-	96	46.552	Capra_hircus
ENSELUG00000009321	tdp2a	77	47.791	ENSTSYG00000037199	TDP2	96	43.854	Carlito_syrichta
ENSELUG00000009321	tdp2a	86	45.848	ENSCPOG00000006390	TDP2	82	43.709	Cavia_porcellus
ENSELUG00000009321	tdp2a	85	47.619	ENSCCAG00000022734	TDP2	90	47.273	Cebus_capucinus
ENSELUG00000009321	tdp2a	94	44.333	ENSCATG00000022076	TDP2	90	45.818	Cercocebus_atys
ENSELUG00000009321	tdp2a	86	46.570	ENSCLAG00000002072	TDP2	77	46.570	Chinchilla_lanigera
ENSELUG00000009321	tdp2a	85	46.154	ENSCSAG00000007769	TDP2	86	42.271	Chlorocebus_sabaeus
ENSELUG00000009321	tdp2a	78	50.988	ENSCPBG00000006551	TDP2	75	45.066	Chrysemys_picta_bellii
ENSELUG00000009321	tdp2a	94	44.333	ENSCANG00000040122	TDP2	91	45.714	Colobus_angolensis_palliatus
ENSELUG00000009321	tdp2a	77	48.583	ENSCGRG00001000384	Tdp2	66	49.393	Cricetulus_griseus_chok1gshd
ENSELUG00000009321	tdp2a	77	48.996	ENSCGRG00000010250	Tdp2	72	47.410	Cricetulus_griseus_crigri
ENSELUG00000009321	tdp2a	81	47.909	ENSCVAG00000003114	tdp2b	77	48.014	Cyprinodon_variegatus
ENSELUG00000009321	tdp2a	87	53.763	ENSDARG00000069941	tdp2a	73	51.051	Danio_rerio
ENSELUG00000009321	tdp2a	79	49.213	ENSDARG00000035954	tdp2b	78	44.333	Danio_rerio
ENSELUG00000009321	tdp2a	93	43.934	ENSDNOG00000044082	TDP2	91	41.246	Dasypus_novemcinctus
ENSELUG00000009321	tdp2a	86	48.014	ENSETEG00000019096	TDP2	99	48.014	Echinops_telfairi
ENSELUG00000009321	tdp2a	77	45.783	ENSEBUG00000006535	tdp2a	58	45.783	Eptatretus_burgeri
ENSELUG00000009321	tdp2a	86	45.126	ENSEASG00005007656	TDP2	82	42.105	Equus_asinus_asinus
ENSELUG00000009321	tdp2a	86	45.126	ENSECAG00000014264	TDP2	82	42.105	Equus_caballus
ENSELUG00000009321	tdp2a	90	46.021	ENSEEUG00000010776	TDP2	81	46.021	Erinaceus_europaeus
ENSELUG00000009321	tdp2a	85	46.154	ENSFCAG00000025612	TDP2	85	41.905	Felis_catus
ENSELUG00000009321	tdp2a	84	46.840	ENSFALG00000004710	TDP2	82	41.104	Ficedula_albicollis
ENSELUG00000009321	tdp2a	86	46.763	ENSFDAG00000006512	TDP2	94	47.101	Fukomys_damarensis
ENSELUG00000009321	tdp2a	87	45.390	ENSFHEG00000013560	-	94	46.237	Fundulus_heteroclitus
ENSELUG00000009321	tdp2a	84	50.186	ENSGALG00000013637	TDP2	73	50.186	Gallus_gallus
ENSELUG00000009321	tdp2a	84	49.071	ENSGAGG00000002853	TDP2	73	46.831	Gopherus_agassizii
ENSELUG00000009321	tdp2a	94	46.000	ENSGGOG00000014237	TDP2	91	46.786	Gorilla_gorilla
ENSELUG00000009321	tdp2a	66	46.047	ENSHBUG00000005421	-	90	46.047	Haplochromis_burtoni
ENSELUG00000009321	tdp2a	82	49.624	ENSHBUG00000002714	tdp2b	73	50.943	Haplochromis_burtoni
ENSELUG00000009321	tdp2a	86	46.209	ENSHGLG00000008655	TDP2	82	43.709	Heterocephalus_glaber_female
ENSELUG00000009321	tdp2a	86	46.209	ENSHGLG00100019087	TDP2	82	43.709	Heterocephalus_glaber_male
ENSELUG00000009321	tdp2a	78	49.407	ENSIPUG00000013691	tdp2b	68	49.213	Ictalurus_punctatus
ENSELUG00000009321	tdp2a	77	45.968	ENSJJAG00000021685	Tdp2	71	45.968	Jaculus_jaculus
ENSELUG00000009321	tdp2a	79	46.718	ENSKMAG00000015485	-	84	46.947	Kryptolebias_marmoratus
ENSELUG00000009321	tdp2a	77	48.594	ENSLACG00000008852	TDP2	93	39.589	Latimeria_chalumnae
ENSELUG00000009321	tdp2a	78	52.988	ENSLOCG00000005817	tdp2b	91	52.549	Lepisosteus_oculatus
ENSELUG00000009321	tdp2a	86	46.931	ENSLAFG00000002567	TDP2	85	44.118	Loxodonta_africana
ENSELUG00000009321	tdp2a	90	44.595	ENSMFAG00000045296	TDP2	96	44.898	Macaca_fascicularis
ENSELUG00000009321	tdp2a	85	46.154	ENSMMUG00000009803	TDP2	85	42.222	Macaca_mulatta
ENSELUG00000009321	tdp2a	90	44.932	ENSMNEG00000038003	TDP2	97	44.932	Macaca_nemestrina
ENSELUG00000009321	tdp2a	94	44.667	ENSMLEG00000028883	TDP2	91	45.714	Mandrillus_leucophaeus
ENSELUG00000009321	tdp2a	87	44.595	ENSMAMG00000013654	tdp2b	81	45.890	Mastacembelus_armatus
ENSELUG00000009321	tdp2a	83	47.015	ENSMZEG00005004153	tdp2b	96	47.810	Maylandia_zebra
ENSELUG00000009321	tdp2a	86	46.316	ENSMZEG00005004126	tdp2b	97	48.070	Maylandia_zebra
ENSELUG00000009321	tdp2a	82	48.496	ENSMZEG00005003950	tdp2b	73	49.811	Maylandia_zebra
ENSELUG00000009321	tdp2a	73	46.383	ENSMZEG00005003980	-	82	46.388	Maylandia_zebra
ENSELUG00000009321	tdp2a	95	43.607	ENSMZEG00005004103	tdp2b	89	46.617	Maylandia_zebra
ENSELUG00000009321	tdp2a	77	49.799	ENSMZEG00005004055	tdp2b	83	50.602	Maylandia_zebra
ENSELUG00000009321	tdp2a	83	47.761	ENSMZEG00005004077	tdp2b	92	48.540	Maylandia_zebra
ENSELUG00000009321	tdp2a	84	48.699	ENSMGAG00000008014	TDP2	80	44.481	Meleagris_gallopavo
ENSELUG00000009321	tdp2a	77	47.773	ENSMAUG00000014451	Tdp2	80	42.157	Mesocricetus_auratus
ENSELUG00000009321	tdp2a	93	43.624	ENSMICG00000000039	TDP2	96	44.755	Microcebus_murinus
ENSELUG00000009321	tdp2a	85	47.080	ENSMOCG00000002823	Tdp2	66	49.798	Microtus_ochrogaster
ENSELUG00000009321	tdp2a	67	47.465	ENSMODG00000011653	TDP2	66	47.465	Monodelphis_domestica
ENSELUG00000009321	tdp2a	77	48.207	ENSMALG00000005368	-	85	48.207	Monopterus_albus
ENSELUG00000009321	tdp2a	89	46.667	MGP_CAROLIEiJ_G0018354	Tdp2	74	46.667	Mus_caroli
ENSELUG00000009321	tdp2a	77	48.996	ENSMUSG00000035958	Tdp2	67	49.799	Mus_musculus
ENSELUG00000009321	tdp2a	77	49.799	MGP_PahariEiJ_G0019417	Tdp2	67	49.799	Mus_pahari
ENSELUG00000009321	tdp2a	77	48.996	MGP_SPRETEiJ_G0019220	Tdp2	66	49.799	Mus_spretus
ENSELUG00000009321	tdp2a	85	46.520	ENSMPUG00000004516	TDP2	83	41.776	Mustela_putorius_furo
ENSELUG00000009321	tdp2a	84	47.426	ENSMLUG00000013506	TDP2	78	45.517	Myotis_lucifugus
ENSELUG00000009321	tdp2a	78	47.222	ENSNGAG00000001375	Tdp2	68	47.222	Nannospalax_galili
ENSELUG00000009321	tdp2a	94	46.000	ENSNLEG00000002447	TDP2	88	46.786	Nomascus_leucogenys
ENSELUG00000009321	tdp2a	85	47.985	ENSOPRG00000016299	TDP2	78	47.985	Ochotona_princeps
ENSELUG00000009321	tdp2a	91	45.051	ENSODEG00000014018	TDP2	98	45.051	Octodon_degus
ENSELUG00000009321	tdp2a	85	46.886	ENSOCUG00000013773	TDP2	76	46.545	Oryctolagus_cuniculus
ENSELUG00000009321	tdp2a	84	47.445	ENSORLG00000001661	-	100	48.014	Oryzias_latipes
ENSELUG00000009321	tdp2a	84	47.810	ENSORLG00020004634	-	100	48.375	Oryzias_latipes_hni
ENSELUG00000009321	tdp2a	84	41.544	ENSORLG00015008190	-	100	41.155	Oryzias_latipes_hsok
ENSELUG00000009321	tdp2a	77	50.813	ENSOMEG00000015899	-	94	50.198	Oryzias_melastigma
ENSELUG00000009321	tdp2a	85	46.886	ENSOGAG00000025303	TDP2	84	43.218	Otolemur_garnettii
ENSELUG00000009321	tdp2a	92	45.608	ENSPPAG00000029023	TDP2	89	47.601	Pan_paniscus
ENSELUG00000009321	tdp2a	85	46.154	ENSPPRG00000015398	TDP2	85	41.905	Panthera_pardus
ENSELUG00000009321	tdp2a	84	46.494	ENSPTIG00000018574	TDP2	98	43.686	Panthera_tigris_altaica
ENSELUG00000009321	tdp2a	94	46.000	ENSPTRG00000017778	TDP2	90	47.464	Pan_troglodytes
ENSELUG00000009321	tdp2a	81	47.692	ENSPANG00000017590	TDP2	91	45.878	Papio_anubis
ENSELUG00000009321	tdp2a	84	51.103	ENSPKIG00000006483	tdp2b	74	51.103	Paramormyrops_kingsleyae
ENSELUG00000009321	tdp2a	82	49.811	ENSPSIG00000004948	TDP2	92	49.811	Pelodiscus_sinensis
ENSELUG00000009321	tdp2a	87	45.714	ENSPEMG00000001788	Tdp2	86	41.945	Peromyscus_maniculatus_bairdii
ENSELUG00000009321	tdp2a	77	43.019	ENSPMAG00000001570	tdp2b	96	43.774	Petromyzon_marinus
ENSELUG00000009321	tdp2a	78	48.606	ENSPCIG00000007316	TDP2	68	47.674	Phascolarctos_cinereus
ENSELUG00000009321	tdp2a	82	45.318	ENSPFOG00000017990	-	96	45.318	Poecilia_formosa
ENSELUG00000009321	tdp2a	76	47.791	ENSPLAG00000019439	-	79	47.809	Poecilia_latipinna
ENSELUG00000009321	tdp2a	78	47.451	ENSPMEG00000010824	-	86	47.471	Poecilia_mexicana
ENSELUG00000009321	tdp2a	85	47.619	ENSPPYG00000016282	TDP2	79	43.533	Pongo_abelii
ENSELUG00000009321	tdp2a	85	46.520	ENSPCOG00000021415	TDP2	97	46.071	Propithecus_coquereli
ENSELUG00000009321	tdp2a	83	45.614	ENSPNYG00000011504	tdp2b	97	46.078	Pundamilia_nyererei
ENSELUG00000009321	tdp2a	59	44.271	ENSPNYG00000001944	-	81	45.312	Pundamilia_nyererei
ENSELUG00000009321	tdp2a	82	48.302	ENSPNYG00000011532	tdp2b	73	50.000	Pundamilia_nyererei
ENSELUG00000009321	tdp2a	87	55.914	ENSPNAG00000022162	tdp2a	75	55.229	Pygocentrus_nattereri
ENSELUG00000009321	tdp2a	77	50.602	ENSRNOG00000018246	Tdp2	98	39.221	Rattus_norvegicus
ENSELUG00000009321	tdp2a	86	46.043	ENSRBIG00000037119	TDP2	91	45.714	Rhinopithecus_bieti
ENSELUG00000009321	tdp2a	86	46.043	ENSRROG00000005025	TDP2	91	45.714	Rhinopithecus_roxellana
ENSELUG00000009321	tdp2a	92	45.946	ENSSBOG00000028734	TDP2	89	47.253	Saimiri_boliviensis_boliviensis
ENSELUG00000009321	tdp2a	80	48.062	ENSSHAG00000002506	TDP2	69	48.062	Sarcophilus_harrisii
ENSELUG00000009321	tdp2a	79	56.800	ENSSFOG00015011322	-	71	58.103	Scleropages_formosus
ENSELUG00000009321	tdp2a	83	45.318	ENSSARG00000013547	TDP2	96	45.318	Sorex_araneus
ENSELUG00000009321	tdp2a	77	52.209	ENSSPUG00000008288	TDP2	83	46.906	Sphenodon_punctatus
ENSELUG00000009321	tdp2a	85	47.985	ENSSSCG00000001092	TDP2	75	47.985	Sus_scrofa
ENSELUG00000009321	tdp2a	80	50.195	ENSTGUG00000009035	TDP2	98	50.195	Taeniopygia_guttata
ENSELUG00000009321	tdp2a	83	48.134	ENSTRUG00000014347	tdp2b	79	45.608	Takifugu_rubripes
ENSELUG00000009321	tdp2a	80	50.775	ENSTRUG00000012218	-	91	49.810	Takifugu_rubripes
ENSELUG00000009321	tdp2a	83	50.558	ENSTNIG00000017792	tdp2b	81	47.973	Tetraodon_nigroviridis
ENSELUG00000009321	tdp2a	80	49.808	ENSTNIG00000010260	TDP2	99	50.575	Tetraodon_nigroviridis
ENSELUG00000009321	tdp2a	77	49.799	ENSTTRG00000016376	TDP2	82	44.816	Tursiops_truncatus
ENSELUG00000009321	tdp2a	84	45.756	ENSUAMG00000025939	TDP2	80	43.816	Ursus_americanus
ENSELUG00000009321	tdp2a	87	44.876	ENSUMAG00000020111	TDP2	94	44.876	Ursus_maritimus
ENSELUG00000009321	tdp2a	77	50.996	ENSXETG00000014826	tdp2	80	42.296	Xenopus_tropicalis
ENSELUG00000009321	tdp2a	77	49.004	ENSXCOG00000010778	-	79	45.017	Xiphophorus_couchianus
ENSELUG00000009321	tdp2a	76	49.200	ENSXMAG00000022252	-	73	49.206	Xiphophorus_maculatus