EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSELUG00000009404 (Gene tree)
Gene ID: 105013459
Gene Symbol: -
Alias: -
Full Name: RNA binding protein fox-1 homolog 2
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 50983 bases
Position: chrLG11:5695540-5746522
Accession: 105013459
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000031750	Fox-1_C	PF12414.8	9.3e-36	1	1
ENSELUP00000008766	Fox-1_C	PF12414.8	4.2e-20	1	1
ENSELUP00000008766	RRM_1	PF00076.22	5.1e-18	1	1
ENSELUP00000031750	RRM_1	PF00076.22	7.9e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000004973	-	2730	XM_010875004	ENSELUP00000031750	474 (aa)	XP_010873306	UPI000661B98D
ENSELUT00000005012	-	1062	-	ENSELUP00000008766	353 (aa)	-	-

Gene Model

Click here to download ENSELUG00000009404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000009404's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSELUG00000009404	-	89	52.691	ENSELUG00000017963	rbfox3b	77	54.196
ENSELUG00000009404	-	63	53.360	ENSELUG00000015077	rbfox1l	79	49.855
ENSELUG00000009404	-	50	51.397	ENSELUG00000013096	rbfox1	66	50.206
ENSELUG00000009404	-	63	69.038	ENSELUG00000000102	rbfox2	100	70.881

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000009404	-	94	54.825	ENSG00000100320	RBFOX2	99	56.835	Homo_sapiens
ENSELUG00000009404	-	100	74.949	ENSAPOG00000021561	-	100	76.122	Acanthochromis_polyacanthus
ENSELUG00000009404	-	100	72.050	ENSAPOG00000004877	rbfox2	100	71.340	Acanthochromis_polyacanthus
ENSELUG00000009404	-	64	63.235	ENSAMEG00000007228	RBFOX2	94	65.421	Ailuropoda_melanoleuca
ENSELUG00000009404	-	58	69.683	ENSACIG00000001690	rbfox2	91	68.750	Amphilophus_citrinellus
ENSELUG00000009404	-	100	75.464	ENSAOCG00000015358	-	100	76.639	Amphiprion_ocellaris
ENSELUG00000009404	-	100	71.843	ENSAOCG00000013752	rbfox2	100	71.134	Amphiprion_ocellaris
ENSELUG00000009404	-	100	75.464	ENSAPEG00000013905	-	100	76.639	Amphiprion_percula
ENSELUG00000009404	-	100	72.050	ENSAPEG00000022359	rbfox2	100	71.340	Amphiprion_percula
ENSELUG00000009404	-	100	74.639	ENSATEG00000009959	-	100	76.531	Anabas_testudineus
ENSELUG00000009404	-	100	70.600	ENSATEG00000021951	rbfox2	100	70.103	Anabas_testudineus
ENSELUG00000009404	-	73	59.736	ENSAPLG00000007609	RBFOX2	81	62.248	Anas_platyrhynchos
ENSELUG00000009404	-	92	54.583	ENSACAG00000016535	RBFOX2	96	53.958	Anolis_carolinensis
ENSELUG00000009404	-	71	60.959	ENSANAG00000015245	RBFOX2	98	63.343	Aotus_nancymaae
ENSELUG00000009404	-	100	75.154	ENSACLG00000017380	-	100	75.714	Astatotilapia_calliptera
ENSELUG00000009404	-	100	70.103	ENSACLG00000009744	rbfox2	100	69.199	Astatotilapia_calliptera
ENSELUG00000009404	-	100	69.467	ENSAMXG00000011451	rbfox2	100	70.588	Astyanax_mexicanus
ENSELUG00000009404	-	92	53.862	ENSBTAG00000020125	RBFOX2	97	53.333	Bos_taurus
ENSELUG00000009404	-	86	56.793	ENSCJAG00000019456	-	97	54.357	Callithrix_jacchus
ENSELUG00000009404	-	75	57.556	ENSCJAG00000038886	-	79	60.278	Callithrix_jacchus
ENSELUG00000009404	-	81	56.193	ENSCAFG00000001701	RBFOX2	86	58.947	Canis_familiaris
ENSELUG00000009404	-	92	47.619	ENSCAFG00020004541	RBFOX2	97	47.119	Canis_lupus_dingo
ENSELUG00000009404	-	92	54.098	ENSCHIG00000014027	RBFOX2	97	53.564	Capra_hircus
ENSELUG00000009404	-	89	55.586	ENSTSYG00000014123	RBFOX2	100	57.309	Carlito_syrichta
ENSELUG00000009404	-	76	57.383	ENSCAPG00000014308	RBFOX2	76	64.935	Cavia_aperea
ENSELUG00000009404	-	75	59.477	ENSCPOG00000022180	RBFOX2	93	56.164	Cavia_porcellus
ENSELUG00000009404	-	92	55.208	ENSCCAG00000036584	RBFOX2	97	54.564	Cebus_capucinus
ENSELUG00000009404	-	92	53.066	ENSCATG00000038655	RBFOX2	97	54.128	Cercocebus_atys
ENSELUG00000009404	-	72	59.532	ENSCLAG00000017106	RBFOX2	82	59.270	Chinchilla_lanigera
ENSELUG00000009404	-	58	65.801	ENSCSAG00000008110	RBFOX2	87	55.988	Chlorocebus_sabaeus
ENSELUG00000009404	-	67	58.935	ENSCHOG00000002887	RBFOX2	99	55.120	Choloepus_hoffmanni
ENSELUG00000009404	-	72	60.403	ENSCPBG00000023144	RBFOX2	85	62.824	Chrysemys_picta_bellii
ENSELUG00000009404	-	82	58.005	ENSCANG00000035832	RBFOX2	100	56.845	Colobus_angolensis_palliatus
ENSELUG00000009404	-	92	55.439	ENSCGRG00001017727	Rbfox2	97	54.393	Cricetulus_griseus_chok1gshd
ENSELUG00000009404	-	75	58.842	ENSCGRG00000014237	Rbfox2	83	61.389	Cricetulus_griseus_crigri
ENSELUG00000009404	-	100	65.887	ENSCSEG00000007748	rbfox2	100	65.759	Cynoglossus_semilaevis
ENSELUG00000009404	-	100	72.655	ENSCSEG00000007360	-	99	76.907	Cynoglossus_semilaevis
ENSELUG00000009404	-	89	64.348	ENSCVAG00000016503	-	98	64.524	Cyprinodon_variegatus
ENSELUG00000009404	-	56	63.291	ENSCVAG00000004491	rbfox2	100	79.646	Cyprinodon_variegatus
ENSELUG00000009404	-	54	72.031	ENSDARG00000052182	rbfox2	100	74.060	Danio_rerio
ENSELUG00000009404	-	81	56.193	ENSDNOG00000004372	RBFOX2	82	59.474	Dasypus_novemcinctus
ENSELUG00000009404	-	72	64.706	ENSDORG00000015003	Rbfox2	81	64.706	Dipodomys_ordii
ENSELUG00000009404	-	72	68.125	ENSETEG00000005638	RBFOX2	83	64.375	Echinops_telfairi
ENSELUG00000009404	-	92	55.882	ENSEASG00005018920	RBFOX2	97	55.230	Equus_asinus_asinus
ENSELUG00000009404	-	92	55.882	ENSECAG00000018923	RBFOX2	97	55.230	Equus_caballus
ENSELUG00000009404	-	81	50.149	ENSEEUG00000004549	RBFOX2	100	52.334	Erinaceus_europaeus
ENSELUG00000009404	-	92	56.042	ENSFCAG00000010061	RBFOX2	97	55.072	Felis_catus
ENSELUG00000009404	-	73	59.736	ENSFALG00000013111	RBFOX2	93	56.198	Ficedula_albicollis
ENSELUG00000009404	-	100	71.047	ENSFHEG00000010546	rbfox2	100	70.287	Fundulus_heteroclitus
ENSELUG00000009404	-	91	55.495	ENSGMOG00000005278	rbfox2	99	56.901	Gadus_morhua
ENSELUG00000009404	-	68	60.227	ENSGALG00000012540	RBFOX2	60	65.198	Gallus_gallus
ENSELUG00000009404	-	50	61.382	ENSGAFG00000017428	-	95	61.789	Gambusia_affinis
ENSELUG00000009404	-	56	63.830	ENSGAFG00000008448	rbfox2	100	80.000	Gambusia_affinis
ENSELUG00000009404	-	90	56.640	ENSGACG00000007174	-	98	62.899	Gasterosteus_aculeatus
ENSELUG00000009404	-	91	59.358	ENSGACG00000015968	rbfox2	98	63.636	Gasterosteus_aculeatus
ENSELUG00000009404	-	72	60.403	ENSGAGG00000025884	RBFOX2	81	62.824	Gopherus_agassizii
ENSELUG00000009404	-	92	54.927	ENSGGOG00000037332	RBFOX2	97	54.451	Gorilla_gorilla
ENSELUG00000009404	-	100	75.770	ENSHBUG00000000856	-	100	76.327	Haplochromis_burtoni
ENSELUG00000009404	-	100	70.309	ENSHBUG00000004356	rbfox2	100	69.405	Haplochromis_burtoni
ENSELUG00000009404	-	92	53.556	ENSHGLG00000012907	RBFOX2	99	57.512	Heterocephalus_glaber_female
ENSELUG00000009404	-	72	60.265	ENSHGLG00100009986	RBFOX2	81	62.678	Heterocephalus_glaber_male
ENSELUG00000009404	-	100	73.824	ENSHCOG00000005662	-	100	73.022	Hippocampus_comes
ENSELUG00000009404	-	100	68.041	ENSHCOG00000016102	rbfox2	100	67.623	Hippocampus_comes
ENSELUG00000009404	-	100	64.694	ENSIPUG00000016896	rbfox2	96	73.559	Ictalurus_punctatus
ENSELUG00000009404	-	72	59.532	ENSSTOG00000014841	RBFOX2	81	59.270	Ictidomys_tridecemlineatus
ENSELUG00000009404	-	72	59.459	ENSJJAG00000014885	Rbfox2	77	62.162	Jaculus_jaculus
ENSELUG00000009404	-	100	71.575	ENSKMAG00000013354	-	100	75.202	Kryptolebias_marmoratus
ENSELUG00000009404	-	100	69.628	ENSKMAG00000021880	-	100	69.421	Kryptolebias_marmoratus
ENSELUG00000009404	-	90	49.866	ENSLACG00000003339	RBFOX2	95	50.667	Latimeria_chalumnae
ENSELUG00000009404	-	72	62.252	ENSLAFG00000027140	RBFOX2	83	61.823	Loxodonta_africana
ENSELUG00000009404	-	92	53.066	ENSMFAG00000031994	RBFOX2	96	57.143	Macaca_fascicularis
ENSELUG00000009404	-	82	56.250	ENSMMUG00000014010	RBFOX2	85	63.112	Macaca_mulatta
ENSELUG00000009404	-	92	53.249	ENSMNEG00000034388	RBFOX2	97	53.864	Macaca_nemestrina
ENSELUG00000009404	-	82	58.005	ENSMLEG00000005854	RBFOX2	100	56.845	Mandrillus_leucophaeus
ENSELUG00000009404	-	100	70.988	ENSMAMG00000008980	-	100	73.006	Mastacembelus_armatus
ENSELUG00000009404	-	100	71.193	ENSMAMG00000004293	rbfox2	100	70.082	Mastacembelus_armatus
ENSELUG00000009404	-	100	73.511	ENSMZEG00005004959	-	100	74.291	Maylandia_zebra
ENSELUG00000009404	-	100	67.418	ENSMZEG00005023838	rbfox2	100	66.937	Maylandia_zebra
ENSELUG00000009404	-	90	53.951	ENSMAUG00000018816	Rbfox2	83	58.082	Mesocricetus_auratus
ENSELUG00000009404	-	77	46.032	ENSMICG00000046341	-	65	47.464	Microcebus_murinus
ENSELUG00000009404	-	92	55.741	ENSMICG00000035417	RBFOX2	97	54.697	Microcebus_murinus
ENSELUG00000009404	-	72	59.197	ENSMOCG00000009327	Rbfox2	81	58.989	Microtus_ochrogaster
ENSELUG00000009404	-	82	57.062	ENSMMOG00000008287	rbfox2	100	63.035	Mola_mola
ENSELUG00000009404	-	71	56.646	ENSMODG00000001122	RBFOX2	86	59.128	Monodelphis_domestica
ENSELUG00000009404	-	54	77.863	ENSMALG00000000623	rbfox2	100	75.954	Monopterus_albus
ENSELUG00000009404	-	86	57.848	MGP_CAROLIEiJ_G0019957	Rbfox2	97	54.906	Mus_caroli
ENSELUG00000009404	-	86	57.556	ENSMUSG00000033565	Rbfox2	98	54.369	Mus_musculus
ENSELUG00000009404	-	86	57.848	MGP_PahariEiJ_G0019967	Rbfox2	97	54.697	Mus_pahari
ENSELUG00000009404	-	86	57.848	MGP_SPRETEiJ_G0020860	Rbfox2	97	54.906	Mus_spretus
ENSELUG00000009404	-	82	58.237	ENSMPUG00000012555	RBFOX2	97	57.077	Mustela_putorius_furo
ENSELUG00000009404	-	82	57.373	ENSMLUG00000002676	RBFOX2	98	56.682	Myotis_lucifugus
ENSELUG00000009404	-	64	62.454	ENSNGAG00000020528	Rbfox2	81	58.989	Nannospalax_galili
ENSELUG00000009404	-	100	70.455	ENSNBRG00000018155	rbfox2	100	69.547	Neolamprologus_brichardi
ENSELUG00000009404	-	80	80.051	ENSNBRG00000001568	-	89	80.256	Neolamprologus_brichardi
ENSELUG00000009404	-	86	56.570	ENSNLEG00000034979	RBFOX2	100	55.902	Nomascus_leucogenys
ENSELUG00000009404	-	82	53.828	ENSMEUG00000001547	RBFOX2	100	53.132	Notamacropus_eugenii
ENSELUG00000009404	-	84	67.257	ENSOPRG00000014878	RBFOX2	81	63.717	Ochotona_princeps
ENSELUG00000009404	-	86	57.684	ENSODEG00000009937	RBFOX2	97	54.772	Octodon_degus
ENSELUG00000009404	-	89	59.730	ENSONIG00000017998	rbfox2	99	60.690	Oreochromis_niloticus
ENSELUG00000009404	-	89	62.198	ENSONIG00000008341	-	99	65.972	Oreochromis_niloticus
ENSELUG00000009404	-	58	66.520	ENSOANG00000007489	RBFOX2	75	64.400	Ornithorhynchus_anatinus
ENSELUG00000009404	-	82	49.107	ENSOCUG00000001349	RBFOX2	97	47.630	Oryctolagus_cuniculus
ENSELUG00000009404	-	100	69.151	ENSORLG00000028082	rbfox2	100	70.103	Oryzias_latipes
ENSELUG00000009404	-	100	73.717	ENSORLG00000014948	-	100	75.967	Oryzias_latipes
ENSELUG00000009404	-	100	69.358	ENSORLG00020008976	rbfox2	100	70.309	Oryzias_latipes_hni
ENSELUG00000009404	-	100	73.511	ENSORLG00020005676	-	100	75.764	Oryzias_latipes_hni
ENSELUG00000009404	-	100	69.358	ENSORLG00015007027	rbfox2	100	70.309	Oryzias_latipes_hsok
ENSELUG00000009404	-	100	73.717	ENSORLG00015000797	-	100	75.967	Oryzias_latipes_hsok
ENSELUG00000009404	-	100	73.975	ENSOMEG00000007909	-	100	76.220	Oryzias_melastigma
ENSELUG00000009404	-	100	70.393	ENSOMEG00000015966	rbfox2	100	69.897	Oryzias_melastigma
ENSELUG00000009404	-	81	55.821	ENSOGAG00000033250	RBFOX2	88	58.594	Otolemur_garnettii
ENSELUG00000009404	-	91	50.909	ENSOARG00000018669	RBFOX2	96	52.208	Ovis_aries
ENSELUG00000009404	-	82	57.373	ENSPPAG00000035653	RBFOX2	98	56.682	Pan_paniscus
ENSELUG00000009404	-	92	55.625	ENSPPRG00000015635	RBFOX2	97	55.072	Panthera_pardus
ENSELUG00000009404	-	72	59.934	ENSPTIG00000019147	RBFOX2	82	62.963	Panthera_tigris_altaica
ENSELUG00000009404	-	92	54.927	ENSPTRG00000014305	RBFOX2	97	54.451	Pan_troglodytes
ENSELUG00000009404	-	92	54.927	ENSPANG00000007030	RBFOX2	97	54.451	Papio_anubis
ENSELUG00000009404	-	100	66.042	ENSPKIG00000006854	-	100	66.736	Paramormyrops_kingsleyae
ENSELUG00000009404	-	92	63.529	ENSPKIG00000010816	-	91	65.789	Paramormyrops_kingsleyae
ENSELUG00000009404	-	72	60.067	ENSPSIG00000017828	RBFOX2	81	62.824	Pelodiscus_sinensis
ENSELUG00000009404	-	75	71.986	ENSPMGG00000016969	-	87	77.241	Periophthalmus_magnuspinnatus
ENSELUG00000009404	-	54	72.973	ENSPMGG00000007138	rbfox2	100	73.077	Periophthalmus_magnuspinnatus
ENSELUG00000009404	-	72	59.197	ENSPEMG00000012542	Rbfox2	81	58.989	Peromyscus_maniculatus_bairdii
ENSELUG00000009404	-	84	55.111	ENSPCIG00000021550	RBFOX2	99	54.444	Phascolarctos_cinereus
ENSELUG00000009404	-	71	71.676	ENSPFOG00000001869	-	100	73.199	Poecilia_formosa
ENSELUG00000009404	-	100	70.165	ENSPFOG00000014209	rbfox2	100	69.405	Poecilia_formosa
ENSELUG00000009404	-	54	75.096	ENSPLAG00000017308	rbfox2	100	73.282	Poecilia_latipinna
ENSELUG00000009404	-	54	77.481	ENSPLAG00000002710	-	100	79.623	Poecilia_latipinna
ENSELUG00000009404	-	54	78.327	ENSPMEG00000013663	-	100	79.323	Poecilia_mexicana
ENSELUG00000009404	-	54	76.718	ENSPMEG00000007320	rbfox2	100	74.809	Poecilia_mexicana
ENSELUG00000009404	-	54	73.282	ENSPREG00000012955	rbfox2	100	73.282	Poecilia_reticulata
ENSELUG00000009404	-	92	54.927	ENSPPYG00000011766	RBFOX2	97	54.451	Pongo_abelii
ENSELUG00000009404	-	75	52.581	ENSPCOG00000016273	RBFOX2	82	56.389	Propithecus_coquereli
ENSELUG00000009404	-	54	63.668	ENSPVAG00000015844	RBFOX2	66	62.284	Pteropus_vampyrus
ENSELUG00000009404	-	100	75.615	ENSPNYG00000020595	-	100	76.578	Pundamilia_nyererei
ENSELUG00000009404	-	100	70.165	ENSPNYG00000016161	rbfox2	100	69.610	Pundamilia_nyererei
ENSELUG00000009404	-	100	63.525	ENSPNAG00000000168	rbfox2	100	64.417	Pygocentrus_nattereri
ENSELUG00000009404	-	99	58.628	ENSPNAG00000014196	-	100	58.836	Pygocentrus_nattereri
ENSELUG00000009404	-	82	56.075	ENSRNOG00000004688	Rbfox2	97	54.233	Rattus_norvegicus
ENSELUG00000009404	-	82	55.193	ENSRBIG00000033696	RBFOX2	82	60.556	Rhinopithecus_bieti
ENSELUG00000009404	-	92	54.927	ENSRROG00000035715	RBFOX2	97	54.451	Rhinopithecus_roxellana
ENSELUG00000009404	-	82	57.110	ENSSBOG00000028291	RBFOX2	98	55.963	Saimiri_boliviensis_boliviensis
ENSELUG00000009404	-	82	56.776	ENSSHAG00000006835	RBFOX2	97	56.075	Sarcophilus_harrisii
ENSELUG00000009404	-	100	65.574	ENSSFOG00015010482	-	99	71.287	Scleropages_formosus
ENSELUG00000009404	-	66	70.204	ENSSFOG00015013291	-	76	81.034	Scleropages_formosus
ENSELUG00000009404	-	100	70.332	ENSSMAG00000013662	rbfox2	100	69.628	Scophthalmus_maximus
ENSELUG00000009404	-	100	71.084	ENSSMAG00000004317	-	100	72.311	Scophthalmus_maximus
ENSELUG00000009404	-	100	74.280	ENSSDUG00000009511	-	100	75.460	Seriola_dumerili
ENSELUG00000009404	-	100	72.314	ENSSDUG00000004292	rbfox2	100	71.193	Seriola_dumerili
ENSELUG00000009404	-	100	74.280	ENSSLDG00000018052	-	100	75.460	Seriola_lalandi_dorsalis
ENSELUG00000009404	-	82	73.367	ENSSLDG00000023983	rbfox2	83	74.169	Seriola_lalandi_dorsalis
ENSELUG00000009404	-	67	60.385	ENSSPUG00000011797	RBFOX2	68	60.385	Sphenodon_punctatus
ENSELUG00000009404	-	100	72.050	ENSSPAG00000013681	rbfox2	100	71.340	Stegastes_partitus
ENSELUG00000009404	-	100	74.538	ENSSPAG00000016272	-	100	75.714	Stegastes_partitus
ENSELUG00000009404	-	82	57.845	ENSSSCG00000000152	RBFOX2	96	57.143	Sus_scrofa
ENSELUG00000009404	-	73	59.736	ENSTGUG00000010808	RBFOX2	84	62.216	Taeniopygia_guttata
ENSELUG00000009404	-	91	62.963	ENSTRUG00000007739	-	94	62.536	Takifugu_rubripes
ENSELUG00000009404	-	56	88.119	ENSTBEG00000003297	-	59	88.119	Tupaia_belangeri
ENSELUG00000009404	-	82	57.773	ENSTTRG00000006922	RBFOX2	100	57.077	Tursiops_truncatus
ENSELUG00000009404	-	73	60.131	ENSUAMG00000010612	RBFOX2	78	65.517	Ursus_americanus
ENSELUG00000009404	-	58	66.520	ENSUMAG00000016785	RBFOX2	61	66.520	Ursus_maritimus
ENSELUG00000009404	-	82	53.364	ENSVPAG00000002824	RBFOX2	100	50.116	Vicugna_pacos
ENSELUG00000009404	-	83	55.310	ENSVVUG00000023561	RBFOX2	99	54.646	Vulpes_vulpes
ENSELUG00000009404	-	80	59.816	ENSXETG00000000231	rbfox2	96	50.900	Xenopus_tropicalis
ENSELUG00000009404	-	60	71.556	ENSXCOG00000015905	-	95	64.134	Xiphophorus_couchianus
ENSELUG00000009404	-	51	69.652	ENSXCOG00000013643	rbfox2	100	68.443	Xiphophorus_couchianus
ENSELUG00000009404	-	90	60.656	ENSXMAG00000029498	rbfox2	93	68.090	Xiphophorus_maculatus
ENSELUG00000009404	-	100	71.516	ENSXMAG00000026769	-	100	72.188	Xiphophorus_maculatus