EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000009464 (Gene tree)
Gene ID: 105028211
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Plus strand
Length: 4355 bases
Position: chrLG23:6595549-6599903
Accession: 105028211
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000008880	tRNA_Me_trans	PF03054.16	3.3e-134	1	1
ENSELUP00000008855	tRNA_Me_trans	PF03054.16	5.5e-125	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000004823	-	2279	XM_010900785	ENSELUP00000008880	416 (aa)	XP_010899087	UPI0005760798
ENSELUT00000004839	-	1110	-	ENSELUP00000008855	369 (aa)	-	-

Gene Model

Click here to download ENSELUG00000009464's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000009464's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000009464	trmu	99	67.663	ENSG00000100416	TRMU	99	78.571	Homo_sapiens
ENSELUG00000009464	trmu	99	81.793	ENSAPOG00000014458	trmu	100	79.714	Acanthochromis_polyacanthus
ENSELUG00000009464	trmu	99	68.306	ENSAMEG00000003319	TRMU	96	67.742	Ailuropoda_melanoleuca
ENSELUG00000009464	trmu	99	80.707	ENSACIG00000002101	trmu	100	77.938	Amphilophus_citrinellus
ENSELUG00000009464	trmu	99	82.065	ENSAOCG00000013155	trmu	99	79.952	Amphiprion_ocellaris
ENSELUG00000009464	trmu	99	81.793	ENSAPEG00000013350	trmu	99	79.710	Amphiprion_percula
ENSELUG00000009464	trmu	99	81.793	ENSATEG00000007814	trmu	100	79.327	Anabas_testudineus
ENSELUG00000009464	trmu	94	68.380	ENSAPLG00000016380	TRMU	99	68.380	Anas_platyrhynchos
ENSELUG00000009464	trmu	99	70.959	ENSACAG00000007720	TRMU	99	69.157	Anolis_carolinensis
ENSELUG00000009464	trmu	99	68.207	ENSANAG00000038053	TRMU	98	67.070	Aotus_nancymaae
ENSELUG00000009464	trmu	99	81.793	ENSACLG00000005395	trmu	98	81.402	Astatotilapia_calliptera
ENSELUG00000009464	trmu	99	79.348	ENSAMXG00000005282	trmu	99	77.240	Astyanax_mexicanus
ENSELUG00000009464	trmu	99	67.663	ENSBTAG00000005595	TRMU	97	67.482	Bos_taurus
ENSELUG00000009464	trmu	98	41.463	WBGene00007114	mttu-1	99	41.327	Caenorhabditis_elegans
ENSELUG00000009464	trmu	99	66.576	ENSCJAG00000000198	TRMU	94	67.085	Callithrix_jacchus
ENSELUG00000009464	trmu	99	68.207	ENSCAFG00000000779	TRMU	97	66.748	Canis_familiaris
ENSELUG00000009464	trmu	99	68.207	ENSCAFG00020009184	TRMU	97	66.748	Canis_lupus_dingo
ENSELUG00000009464	trmu	99	67.120	ENSCHIG00000017074	TRMU	98	66.667	Capra_hircus
ENSELUG00000009464	trmu	99	69.293	ENSTSYG00000003853	TRMU	98	67.961	Carlito_syrichta
ENSELUG00000009464	trmu	96	62.903	ENSCAPG00000013034	TRMU	97	62.500	Cavia_aperea
ENSELUG00000009464	trmu	99	67.391	ENSCPOG00000020780	TRMU	98	66.505	Cavia_porcellus
ENSELUG00000009464	trmu	99	67.935	ENSCCAG00000021641	TRMU	96	67.482	Cebus_capucinus
ENSELUG00000009464	trmu	99	67.935	ENSCATG00000032800	TRMU	94	68.593	Cercocebus_atys
ENSELUG00000009464	trmu	99	68.750	ENSCLAG00000017269	TRMU	97	68.215	Chinchilla_lanigera
ENSELUG00000009464	trmu	99	67.663	ENSCSAG00000005279	TRMU	94	68.342	Chlorocebus_sabaeus
ENSELUG00000009464	trmu	92	69.501	ENSCPBG00000011621	TRMU	93	70.350	Chrysemys_picta_bellii
ENSELUG00000009464	trmu	98	45.856	ENSCING00000019371	-	95	46.015	Ciona_intestinalis
ENSELUG00000009464	trmu	99	67.391	ENSCANG00000041645	TRMU	94	68.342	Colobus_angolensis_palliatus
ENSELUG00000009464	trmu	99	67.120	ENSCGRG00001001739	Trmu	98	65.777	Cricetulus_griseus_chok1gshd
ENSELUG00000009464	trmu	99	61.957	ENSCGRG00000002781	Trmu	98	61.165	Cricetulus_griseus_crigri
ENSELUG00000009464	trmu	99	75.815	ENSCSEG00000012382	trmu	98	74.390	Cynoglossus_semilaevis
ENSELUG00000009464	trmu	99	80.978	ENSCVAG00000001366	trmu	100	78.657	Cyprinodon_variegatus
ENSELUG00000009464	trmu	99	77.989	ENSDARG00000043734	trmu	100	75.300	Danio_rerio
ENSELUG00000009464	trmu	64	54.478	ENSDNOG00000047245	-	97	53.237	Dasypus_novemcinctus
ENSELUG00000009464	trmu	99	68.478	ENSDORG00000007455	Trmu	97	69.095	Dipodomys_ordii
ENSELUG00000009464	trmu	99	43.443	FBgn0040337	CG3021	95	43.411	Drosophila_melanogaster
ENSELUG00000009464	trmu	52	72.034	ENSETEG00000009394	-	66	72.034	Echinops_telfairi
ENSELUG00000009464	trmu	99	54.472	ENSEBUG00000007454	trmu	100	54.179	Eptatretus_burgeri
ENSELUG00000009464	trmu	99	69.022	ENSEASG00005021725	TRMU	98	67.961	Equus_asinus_asinus
ENSELUG00000009464	trmu	99	69.022	ENSECAG00000000467	TRMU	97	67.961	Equus_caballus
ENSELUG00000009464	trmu	69	50.000	ENSEEUG00000000074	-	66	81.481	Erinaceus_europaeus
ENSELUG00000009464	trmu	99	68.478	ENSFCAG00000006533	TRMU	94	68.844	Felis_catus
ENSELUG00000009464	trmu	92	69.341	ENSFALG00000010035	TRMU	96	69.737	Ficedula_albicollis
ENSELUG00000009464	trmu	92	67.059	ENSFDAG00000017472	TRMU	97	66.146	Fukomys_damarensis
ENSELUG00000009464	trmu	99	80.435	ENSFHEG00000003162	trmu	100	78.657	Fundulus_heteroclitus
ENSELUG00000009464	trmu	99	73.118	ENSGMOG00000001323	trmu	100	72.549	Gadus_morhua
ENSELUG00000009464	trmu	99	69.681	ENSGALG00000031922	TRMU	99	68.571	Gallus_gallus
ENSELUG00000009464	trmu	99	82.880	ENSGAFG00000013331	trmu	98	80.779	Gambusia_affinis
ENSELUG00000009464	trmu	99	78.933	ENSGACG00000019024	trmu	100	77.358	Gasterosteus_aculeatus
ENSELUG00000009464	trmu	99	68.207	ENSGGOG00000000203	TRMU	98	66.828	Gorilla_gorilla
ENSELUG00000009464	trmu	99	81.250	ENSHBUG00000023421	trmu	98	81.081	Haplochromis_burtoni
ENSELUG00000009464	trmu	99	67.391	ENSHGLG00000009278	TRMU	94	68.262	Heterocephalus_glaber_female
ENSELUG00000009464	trmu	99	67.391	ENSHGLG00100018863	TRMU	94	68.262	Heterocephalus_glaber_male
ENSELUG00000009464	trmu	99	82.065	ENSHCOG00000013459	trmu	99	79.036	Hippocampus_comes
ENSELUG00000009464	trmu	99	80.707	ENSIPUG00000009785	trmu	98	81.407	Ictalurus_punctatus
ENSELUG00000009464	trmu	99	67.663	ENSSTOG00000010993	TRMU	99	66.507	Ictidomys_tridecemlineatus
ENSELUG00000009464	trmu	99	67.391	ENSJJAG00000000667	Trmu	99	66.019	Jaculus_jaculus
ENSELUG00000009464	trmu	99	80.435	ENSKMAG00000008516	trmu	100	78.177	Kryptolebias_marmoratus
ENSELUG00000009464	trmu	99	80.978	ENSLBEG00000018831	trmu	100	79.137	Labrus_bergylta
ENSELUG00000009464	trmu	99	75.683	ENSLACG00000013713	TRMU	99	73.381	Latimeria_chalumnae
ENSELUG00000009464	trmu	99	81.793	ENSLOCG00000016066	trmu	95	81.955	Lepisosteus_oculatus
ENSELUG00000009464	trmu	99	58.760	ENSLAFG00000005129	TRMU	97	59.804	Loxodonta_africana
ENSELUG00000009464	trmu	99	67.663	ENSMFAG00000039767	TRMU	94	68.342	Macaca_fascicularis
ENSELUG00000009464	trmu	99	67.663	ENSMMUG00000000807	TRMU	94	68.342	Macaca_mulatta
ENSELUG00000009464	trmu	99	67.663	ENSMNEG00000028164	TRMU	94	68.342	Macaca_nemestrina
ENSELUG00000009464	trmu	99	67.935	ENSMLEG00000033884	TRMU	94	68.593	Mandrillus_leucophaeus
ENSELUG00000009464	trmu	99	82.065	ENSMAMG00000004717	trmu	100	79.475	Mastacembelus_armatus
ENSELUG00000009464	trmu	99	81.793	ENSMZEG00005015797	trmu	100	79.616	Maylandia_zebra
ENSELUG00000009464	trmu	81	66.181	ENSMGAG00000007550	TRMU	100	66.181	Meleagris_gallopavo
ENSELUG00000009464	trmu	99	67.120	ENSMAUG00000022282	Trmu	99	65.291	Mesocricetus_auratus
ENSELUG00000009464	trmu	99	68.478	ENSMICG00000029046	TRMU	99	67.470	Microcebus_murinus
ENSELUG00000009464	trmu	99	66.848	ENSMOCG00000014641	Trmu	97	66.832	Microtus_ochrogaster
ENSELUG00000009464	trmu	97	81.232	ENSMMOG00000007229	trmu	98	78.049	Mola_mola
ENSELUG00000009464	trmu	99	64.420	ENSMODG00000007433	TRMU	96	64.165	Monodelphis_domestica
ENSELUG00000009464	trmu	99	80.978	ENSMALG00000007721	trmu	100	78.657	Monopterus_albus
ENSELUG00000009464	trmu	99	66.576	MGP_CAROLIEiJ_G0020134	Trmu	83	80.488	Mus_caroli
ENSELUG00000009464	trmu	99	66.848	ENSMUSG00000022386	Trmu	99	65.777	Mus_musculus
ENSELUG00000009464	trmu	99	66.304	MGP_PahariEiJ_G0020139	Trmu	99	65.291	Mus_pahari
ENSELUG00000009464	trmu	99	66.848	MGP_SPRETEiJ_G0021031	Trmu	99	65.777	Mus_spretus
ENSELUG00000009464	trmu	99	67.935	ENSMPUG00000002523	TRMU	98	66.262	Mustela_putorius_furo
ENSELUG00000009464	trmu	99	68.207	ENSNGAG00000005132	Trmu	99	66.908	Nannospalax_galili
ENSELUG00000009464	trmu	99	80.978	ENSNBRG00000022690	trmu	99	80.000	Neolamprologus_brichardi
ENSELUG00000009464	trmu	99	68.207	ENSNLEG00000015773	TRMU	98	66.586	Nomascus_leucogenys
ENSELUG00000009464	trmu	89	55.623	ENSMEUG00000000216	TRMU	99	56.535	Notamacropus_eugenii
ENSELUG00000009464	trmu	99	67.663	ENSODEG00000014745	TRMU	96	68.250	Octodon_degus
ENSELUG00000009464	trmu	99	80.978	ENSONIG00000009821	trmu	100	78.657	Oreochromis_niloticus
ENSELUG00000009464	trmu	92	65.889	ENSOANG00000001891	TRMU	97	65.625	Ornithorhynchus_anatinus
ENSELUG00000009464	trmu	92	66.862	ENSOCUG00000003664	TRMU	93	66.581	Oryctolagus_cuniculus
ENSELUG00000009464	trmu	99	77.446	ENSORLG00000019015	trmu	99	76.087	Oryzias_latipes
ENSELUG00000009464	trmu	99	77.989	ENSORLG00020006830	trmu	99	76.570	Oryzias_latipes_hni
ENSELUG00000009464	trmu	99	77.989	ENSORLG00015003907	trmu	99	76.570	Oryzias_latipes_hsok
ENSELUG00000009464	trmu	57	77.966	ENSOMEG00000015541	trmu	85	77.966	Oryzias_melastigma
ENSELUG00000009464	trmu	99	67.120	ENSOGAG00000008096	TRMU	97	66.667	Otolemur_garnettii
ENSELUG00000009464	trmu	100	65.583	ENSOARG00000019475	TRMU	93	64.398	Ovis_aries
ENSELUG00000009464	trmu	99	67.935	ENSPPAG00000033944	TRMU	98	66.586	Pan_paniscus
ENSELUG00000009464	trmu	99	68.478	ENSPPRG00000004197	TRMU	94	68.844	Panthera_pardus
ENSELUG00000009464	trmu	75	67.626	ENSPTIG00000014122	TRMU	97	69.318	Panthera_tigris_altaica
ENSELUG00000009464	trmu	99	67.935	ENSPTRG00000014510	TRMU	98	66.586	Pan_troglodytes
ENSELUG00000009464	trmu	99	67.935	ENSPANG00000023074	TRMU	97	65.847	Papio_anubis
ENSELUG00000009464	trmu	99	79.348	ENSPKIG00000002849	trmu	100	77.404	Paramormyrops_kingsleyae
ENSELUG00000009464	trmu	90	70.571	ENSPSIG00000013020	TRMU	95	71.350	Pelodiscus_sinensis
ENSELUG00000009464	trmu	99	81.793	ENSPMGG00000004083	trmu	100	79.327	Periophthalmus_magnuspinnatus
ENSELUG00000009464	trmu	99	66.576	ENSPEMG00000014007	Trmu	99	65.291	Peromyscus_maniculatus_bairdii
ENSELUG00000009464	trmu	98	65.278	ENSPCIG00000009923	TRMU	95	64.865	Phascolarctos_cinereus
ENSELUG00000009464	trmu	95	79.155	ENSPFOG00000008197	trmu	90	77.419	Poecilia_formosa
ENSELUG00000009464	trmu	99	81.793	ENSPLAG00000008414	trmu	99	79.808	Poecilia_latipinna
ENSELUG00000009464	trmu	99	82.065	ENSPMEG00000004326	trmu	100	80.096	Poecilia_mexicana
ENSELUG00000009464	trmu	99	81.522	ENSPREG00000007980	trmu	99	79.327	Poecilia_reticulata
ENSELUG00000009464	trmu	99	67.663	ENSPPYG00000011949	TRMU	98	66.344	Pongo_abelii
ENSELUG00000009464	trmu	93	60.881	ENSPCAG00000013462	TRMU	99	60.881	Procavia_capensis
ENSELUG00000009464	trmu	99	68.478	ENSPCOG00000016539	TRMU	98	67.633	Propithecus_coquereli
ENSELUG00000009464	trmu	99	62.500	ENSPVAG00000013202	TRMU	99	61.650	Pteropus_vampyrus
ENSELUG00000009464	trmu	99	81.793	ENSPNYG00000005629	trmu	100	79.376	Pundamilia_nyererei
ENSELUG00000009464	trmu	99	82.065	ENSPNAG00000006339	trmu	93	82.828	Pygocentrus_nattereri
ENSELUG00000009464	trmu	99	66.304	ENSRNOG00000016465	Trmu	99	65.049	Rattus_norvegicus
ENSELUG00000009464	trmu	99	67.120	ENSRBIG00000038973	TRMU	94	67.588	Rhinopithecus_bieti
ENSELUG00000009464	trmu	99	67.391	ENSRROG00000004267	TRMU	94	67.839	Rhinopithecus_roxellana
ENSELUG00000009464	trmu	99	33.505	YDL033C	SLM3	91	34.243	Saccharomyces_cerevisiae
ENSELUG00000009464	trmu	99	67.663	ENSSBOG00000030184	TRMU	98	66.344	Saimiri_boliviensis_boliviensis
ENSELUG00000009464	trmu	90	76.877	ENSSFOG00015020664	trmu	99	75.853	Scleropages_formosus
ENSELUG00000009464	trmu	99	81.522	ENSSMAG00000019450	trmu	100	79.376	Scophthalmus_maximus
ENSELUG00000009464	trmu	99	82.065	ENSSDUG00000011913	trmu	100	79.616	Seriola_dumerili
ENSELUG00000009464	trmu	99	81.793	ENSSLDG00000011684	trmu	100	79.376	Seriola_lalandi_dorsalis
ENSELUG00000009464	trmu	99	60.165	ENSSPUG00000017123	TRMU	97	60.732	Sphenodon_punctatus
ENSELUG00000009464	trmu	100	76.739	ENSSPAG00000021875	trmu	100	76.739	Stegastes_partitus
ENSELUG00000009464	trmu	99	66.576	ENSSSCG00000000007	TRMU	99	65.311	Sus_scrofa
ENSELUG00000009464	trmu	92	70.760	ENSTGUG00000003663	-	99	71.314	Taeniopygia_guttata
ENSELUG00000009464	trmu	99	80.435	ENSTRUG00000001231	trmu	99	78.293	Takifugu_rubripes
ENSELUG00000009464	trmu	99	79.245	ENSTNIG00000010484	trmu	97	77.482	Tetraodon_nigroviridis
ENSELUG00000009464	trmu	74	56.034	ENSTBEG00000011276	-	78	56.034	Tupaia_belangeri
ENSELUG00000009464	trmu	99	67.935	ENSTTRG00000004160	TRMU	99	66.587	Tursiops_truncatus
ENSELUG00000009464	trmu	79	69.521	ENSUAMG00000024825	TRMU	97	69.521	Ursus_americanus
ENSELUG00000009464	trmu	95	55.919	ENSUMAG00000019079	TRMU	97	68.482	Ursus_maritimus
ENSELUG00000009464	trmu	60	60.909	ENSVPAG00000000685	-	100	60.909	Vicugna_pacos
ENSELUG00000009464	trmu	99	67.391	ENSVVUG00000024963	TRMU	98	66.019	Vulpes_vulpes
ENSELUG00000009464	trmu	99	75.339	ENSXETG00000023304	trmu	96	73.966	Xenopus_tropicalis
ENSELUG00000009464	trmu	99	79.784	ENSXCOG00000015105	trmu	99	78.043	Xiphophorus_couchianus
ENSELUG00000009464	trmu	99	81.793	ENSXMAG00000006697	trmu	99	79.808	Xiphophorus_maculatus