EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000009612 (Gene tree)
Gene ID: 105022256
Gene Symbol: RPAB5
Alias: zgc:112305
Full Name: RNA polymerase II subunit L
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 897 bases
Position: chrLG02:17976857-17977753
Accession: 105022256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000008972	RNA_pol_N	PF01194.17	3.2e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000004647	-	390	XM_010890500	ENSELUP00000008972	67 (aa)	XP_010888802	C1BZA7

Gene Model

Click here to download ENSELUG00000009612's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03020	RNA polymerase	KEGG
els04623	Cytosolic DNA-sensing pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000009612's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000009612	RPAB5	100	100.000	ENSG00000177700	POLR2L	100	100.000	Homo_sapiens
ENSELUG00000009612	RPAB5	100	98.507	ENSAPOG00000011116	polr2l	100	98.507	Acanthochromis_polyacanthus
ENSELUG00000009612	RPAB5	100	98.507	ENSACIG00000005514	polr2l	100	98.507	Amphilophus_citrinellus
ENSELUG00000009612	RPAB5	100	98.507	ENSAOCG00000012342	polr2l	100	98.507	Amphiprion_ocellaris
ENSELUG00000009612	RPAB5	100	98.507	ENSAPEG00000015365	polr2l	100	98.507	Amphiprion_percula
ENSELUG00000009612	RPAB5	100	98.507	ENSATEG00000007953	polr2l	100	98.507	Anabas_testudineus
ENSELUG00000009612	RPAB5	100	100.000	ENSACAG00000015509	POLR2L	100	100.000	Anolis_carolinensis
ENSELUG00000009612	RPAB5	100	100.000	ENSANAG00000022996	POLR2L	100	100.000	Aotus_nancymaae
ENSELUG00000009612	RPAB5	100	98.507	ENSACLG00000026685	polr2l	100	98.507	Astatotilapia_calliptera
ENSELUG00000009612	RPAB5	100	98.507	ENSAMXG00000037735	polr2l	100	98.507	Astyanax_mexicanus
ENSELUG00000009612	RPAB5	100	100.000	ENSBTAG00000031061	POLR2L	100	100.000	Bos_taurus
ENSELUG00000009612	RPAB5	100	85.075	WBGene00021347	rpb-10	100	85.075	Caenorhabditis_elegans
ENSELUG00000009612	RPAB5	100	100.000	ENSCJAG00000041101	POLR2L	100	100.000	Callithrix_jacchus
ENSELUG00000009612	RPAB5	100	100.000	ENSCAFG00020017621	POLR2L	100	100.000	Canis_lupus_dingo
ENSELUG00000009612	RPAB5	100	100.000	ENSCHIG00000023006	POLR2L	100	100.000	Capra_hircus
ENSELUG00000009612	RPAB5	100	71.642	ENSTSYG00000027353	-	100	71.642	Carlito_syrichta
ENSELUG00000009612	RPAB5	100	100.000	ENSCPOG00000033252	POLR2L	100	100.000	Cavia_porcellus
ENSELUG00000009612	RPAB5	100	100.000	ENSCCAG00000035630	POLR2L	100	100.000	Cebus_capucinus
ENSELUG00000009612	RPAB5	100	100.000	ENSCATG00000041490	POLR2L	100	100.000	Cercocebus_atys
ENSELUG00000009612	RPAB5	100	68.493	ENSCATG00000034571	-	100	68.493	Cercocebus_atys
ENSELUG00000009612	RPAB5	100	100.000	ENSCLAG00000002071	POLR2L	100	100.000	Chinchilla_lanigera
ENSELUG00000009612	RPAB5	100	100.000	ENSCSAG00000010528	POLR2L	100	100.000	Chlorocebus_sabaeus
ENSELUG00000009612	RPAB5	100	100.000	ENSCPBG00000007106	POLR2L	100	100.000	Chrysemys_picta_bellii
ENSELUG00000009612	RPAB5	100	89.552	ENSCSAVG00000006078	-	100	89.552	Ciona_savignyi
ENSELUG00000009612	RPAB5	100	100.000	ENSCANG00000043116	POLR2L	100	100.000	Colobus_angolensis_palliatus
ENSELUG00000009612	RPAB5	100	100.000	ENSCGRG00001023078	-	100	100.000	Cricetulus_griseus_chok1gshd
ENSELUG00000009612	RPAB5	100	95.522	ENSCGRG00001003398	-	87	95.522	Cricetulus_griseus_chok1gshd
ENSELUG00000009612	RPAB5	100	100.000	ENSCGRG00000018042	-	100	100.000	Cricetulus_griseus_crigri
ENSELUG00000009612	RPAB5	100	95.522	ENSCGRG00000019284	-	87	95.522	Cricetulus_griseus_crigri
ENSELUG00000009612	RPAB5	100	98.507	ENSCSEG00000001959	polr2l	100	98.507	Cynoglossus_semilaevis
ENSELUG00000009612	RPAB5	100	98.507	ENSCVAG00000007386	polr2l	100	98.507	Cyprinodon_variegatus
ENSELUG00000009612	RPAB5	100	98.507	ENSDARG00000058349	polr2l	100	98.507	Danio_rerio
ENSELUG00000009612	RPAB5	96	76.562	ENSDNOG00000049434	-	100	76.562	Dasypus_novemcinctus
ENSELUG00000009612	RPAB5	100	92.537	FBgn0039218	Rpb10	100	92.537	Drosophila_melanogaster
ENSELUG00000009612	RPAB5	100	100.000	ENSETEG00000012556	POLR2L	100	100.000	Echinops_telfairi
ENSELUG00000009612	RPAB5	100	95.522	ENSEBUG00000000392	-	100	95.522	Eptatretus_burgeri
ENSELUG00000009612	RPAB5	100	95.522	ENSEBUG00000010353	-	100	95.522	Eptatretus_burgeri
ENSELUG00000009612	RPAB5	100	70.149	ENSEASG00005017228	-	85	70.149	Equus_asinus_asinus
ENSELUG00000009612	RPAB5	100	100.000	ENSEASG00005007478	POLR2L	100	100.000	Equus_asinus_asinus
ENSELUG00000009612	RPAB5	100	70.149	ENSECAG00000001180	POLR2L	85	70.149	Equus_caballus
ENSELUG00000009612	RPAB5	100	100.000	ENSECAG00000031030	POLR2L	100	100.000	Equus_caballus
ENSELUG00000009612	RPAB5	100	74.627	ENSEEUG00000015795	-	100	74.627	Erinaceus_europaeus
ENSELUG00000009612	RPAB5	100	100.000	ENSFCAG00000043112	POLR2L	100	100.000	Felis_catus
ENSELUG00000009612	RPAB5	100	100.000	ENSFALG00000012058	POLR2L	100	100.000	Ficedula_albicollis
ENSELUG00000009612	RPAB5	100	100.000	ENSFDAG00000021533	POLR2L	100	100.000	Fukomys_damarensis
ENSELUG00000009612	RPAB5	100	98.507	ENSFHEG00000019804	polr2l	100	98.507	Fundulus_heteroclitus
ENSELUG00000009612	RPAB5	100	100.000	ENSGMOG00000001279	polr2l	100	100.000	Gadus_morhua
ENSELUG00000009612	RPAB5	100	100.000	ENSGALG00000006841	POLR2L	100	100.000	Gallus_gallus
ENSELUG00000009612	RPAB5	100	98.507	ENSGAFG00000013789	polr2l	100	98.507	Gambusia_affinis
ENSELUG00000009612	RPAB5	100	100.000	ENSGAGG00000017751	-	51	100.000	Gopherus_agassizii
ENSELUG00000009612	RPAB5	100	97.015	ENSGAGG00000006577	POLR2L	100	97.015	Gopherus_agassizii
ENSELUG00000009612	RPAB5	100	100.000	ENSGGOG00000010821	POLR2L	100	100.000	Gorilla_gorilla
ENSELUG00000009612	RPAB5	99	69.697	ENSGGOG00000040273	-	100	69.697	Gorilla_gorilla
ENSELUG00000009612	RPAB5	100	98.507	ENSHBUG00000013767	polr2l	100	98.507	Haplochromis_burtoni
ENSELUG00000009612	RPAB5	100	100.000	ENSHGLG00000007095	POLR2L	100	100.000	Heterocephalus_glaber_female
ENSELUG00000009612	RPAB5	100	100.000	ENSHGLG00100010399	POLR2L	100	100.000	Heterocephalus_glaber_male
ENSELUG00000009612	RPAB5	100	97.015	ENSHCOG00000008730	polr2l	100	97.015	Hippocampus_comes
ENSELUG00000009612	RPAB5	100	97.015	ENSIPUG00000017431	polr2l	100	97.015	Ictalurus_punctatus
ENSELUG00000009612	RPAB5	99	71.642	ENSSTOG00000022797	-	81	71.642	Ictidomys_tridecemlineatus
ENSELUG00000009612	RPAB5	100	86.567	ENSJJAG00000011334	-	100	86.567	Jaculus_jaculus
ENSELUG00000009612	RPAB5	100	100.000	ENSJJAG00000011194	-	100	100.000	Jaculus_jaculus
ENSELUG00000009612	RPAB5	100	98.507	ENSKMAG00000003267	polr2l	100	98.507	Kryptolebias_marmoratus
ENSELUG00000009612	RPAB5	100	97.015	ENSLBEG00000000928	polr2l	100	97.015	Labrus_bergylta
ENSELUG00000009612	RPAB5	100	97.015	ENSLACG00000017570	POLR2L	100	97.015	Latimeria_chalumnae
ENSELUG00000009612	RPAB5	100	100.000	ENSMFAG00000001554	POLR2L	100	100.000	Macaca_fascicularis
ENSELUG00000009612	RPAB5	100	100.000	ENSMNEG00000026729	POLR2L	100	100.000	Macaca_nemestrina
ENSELUG00000009612	RPAB5	100	69.863	ENSMLEG00000042017	-	100	69.863	Mandrillus_leucophaeus
ENSELUG00000009612	RPAB5	100	97.015	ENSMAMG00000021937	polr2l	100	97.015	Mastacembelus_armatus
ENSELUG00000009612	RPAB5	100	98.507	ENSMZEG00005000960	polr2l	100	98.507	Maylandia_zebra
ENSELUG00000009612	RPAB5	100	100.000	ENSMGAG00000011610	POLR2L	100	100.000	Meleagris_gallopavo
ENSELUG00000009612	RPAB5	100	100.000	ENSMAUG00000019023	Polr2l	100	100.000	Mesocricetus_auratus
ENSELUG00000009612	RPAB5	100	100.000	ENSMICG00000047069	POLR2L	100	100.000	Microcebus_murinus
ENSELUG00000009612	RPAB5	100	100.000	ENSMOCG00000021062	Polr2l	100	100.000	Microtus_ochrogaster
ENSELUG00000009612	RPAB5	100	98.507	ENSMMOG00000017276	polr2l	100	98.507	Mola_mola
ENSELUG00000009612	RPAB5	100	97.015	ENSMALG00000018890	polr2l	100	97.015	Monopterus_albus
ENSELUG00000009612	RPAB5	100	100.000	MGP_CAROLIEiJ_G0030702	Polr2l	100	100.000	Mus_caroli
ENSELUG00000009612	RPAB5	100	100.000	ENSMUSG00000038489	Polr2l	100	100.000	Mus_musculus
ENSELUG00000009612	RPAB5	100	100.000	MGP_PahariEiJ_G0013901	Polr2l	100	100.000	Mus_pahari
ENSELUG00000009612	RPAB5	100	98.507	ENSMLUG00000005362	POLR2L	100	98.507	Myotis_lucifugus
ENSELUG00000009612	RPAB5	100	86.567	ENSNGAG00000014203	-	100	86.567	Nannospalax_galili
ENSELUG00000009612	RPAB5	100	100.000	ENSNGAG00000015204	-	100	100.000	Nannospalax_galili
ENSELUG00000009612	RPAB5	100	98.507	ENSNBRG00000013837	polr2l	100	98.507	Neolamprologus_brichardi
ENSELUG00000009612	RPAB5	100	100.000	ENSNLEG00000008683	POLR2L	100	100.000	Nomascus_leucogenys
ENSELUG00000009612	RPAB5	100	100.000	ENSMEUG00000003938	POLR2L	100	100.000	Notamacropus_eugenii
ENSELUG00000009612	RPAB5	100	97.015	ENSOPRG00000001702	-	100	97.015	Ochotona_princeps
ENSELUG00000009612	RPAB5	100	98.507	ENSOPRG00000009675	-	100	98.507	Ochotona_princeps
ENSELUG00000009612	RPAB5	100	88.060	ENSODEG00000014372	-	100	88.060	Octodon_degus
ENSELUG00000009612	RPAB5	100	100.000	ENSODEG00000016905	-	100	100.000	Octodon_degus
ENSELUG00000009612	RPAB5	100	98.507	ENSORLG00000027182	polr2l	99	98.507	Oryzias_latipes
ENSELUG00000009612	RPAB5	100	98.507	ENSORLG00020012637	polr2l	99	98.507	Oryzias_latipes_hni
ENSELUG00000009612	RPAB5	100	98.507	ENSORLG00015011064	polr2l	99	98.507	Oryzias_latipes_hsok
ENSELUG00000009612	RPAB5	100	98.507	ENSOMEG00000020485	polr2l	99	98.507	Oryzias_melastigma
ENSELUG00000009612	RPAB5	100	100.000	ENSOGAG00000024166	POLR2L	100	100.000	Otolemur_garnettii
ENSELUG00000009612	RPAB5	52	100.000	ENSPTIG00000012764	POLR2L	52	100.000	Panthera_tigris_altaica
ENSELUG00000009612	RPAB5	100	100.000	ENSPTRG00000052712	POLR2L	100	100.000	Pan_troglodytes
ENSELUG00000009612	RPAB5	100	100.000	ENSPANG00000032375	POLR2L	100	100.000	Papio_anubis
ENSELUG00000009612	RPAB5	100	98.507	ENSPKIG00000017973	polr2l	84	98.507	Paramormyrops_kingsleyae
ENSELUG00000009612	RPAB5	100	100.000	ENSPSIG00000013867	POLR2L	100	100.000	Pelodiscus_sinensis
ENSELUG00000009612	RPAB5	100	94.030	ENSPMGG00000004854	polr2l	100	94.030	Periophthalmus_magnuspinnatus
ENSELUG00000009612	RPAB5	100	86.567	ENSPEMG00000014839	-	100	86.567	Peromyscus_maniculatus_bairdii
ENSELUG00000009612	RPAB5	100	70.149	ENSPCIG00000011752	-	100	70.149	Phascolarctos_cinereus
ENSELUG00000009612	RPAB5	100	100.000	ENSPCIG00000008250	-	100	100.000	Phascolarctos_cinereus
ENSELUG00000009612	RPAB5	100	98.507	ENSPFOG00000004650	polr2l	100	98.507	Poecilia_formosa
ENSELUG00000009612	RPAB5	100	98.507	ENSPLAG00000010698	polr2l	100	98.507	Poecilia_latipinna
ENSELUG00000009612	RPAB5	100	98.507	ENSPMEG00000015438	polr2l	100	98.507	Poecilia_mexicana
ENSELUG00000009612	RPAB5	100	98.507	ENSPREG00000022948	polr2l	100	98.507	Poecilia_reticulata
ENSELUG00000009612	RPAB5	100	94.030	ENSPPYG00000029850	POLR2L	100	94.030	Pongo_abelii
ENSELUG00000009612	RPAB5	100	100.000	ENSPCAG00000011644	POLR2L	100	100.000	Procavia_capensis
ENSELUG00000009612	RPAB5	100	100.000	ENSPVAG00000014859	POLR2L	100	100.000	Pteropus_vampyrus
ENSELUG00000009612	RPAB5	100	98.507	ENSPNYG00000007348	polr2l	100	98.507	Pundamilia_nyererei
ENSELUG00000009612	RPAB5	100	98.507	ENSPNAG00000015066	polr2l	100	98.507	Pygocentrus_nattereri
ENSELUG00000009612	RPAB5	100	95.522	ENSRNOG00000023805	AABR07042789.1	100	95.522	Rattus_norvegicus
ENSELUG00000009612	RPAB5	100	100.000	ENSRBIG00000033751	POLR2L	100	100.000	Rhinopithecus_bieti
ENSELUG00000009612	RPAB5	100	100.000	ENSRROG00000045437	-	100	100.000	Rhinopithecus_roxellana
ENSELUG00000009612	RPAB5	100	100.000	ENSRROG00000001154	-	100	100.000	Rhinopithecus_roxellana
ENSELUG00000009612	RPAB5	100	73.529	YOR210W	RPB10	97	73.529	Saccharomyces_cerevisiae
ENSELUG00000009612	RPAB5	100	67.164	ENSSBOG00000026975	-	100	67.164	Saimiri_boliviensis_boliviensis
ENSELUG00000009612	RPAB5	100	95.522	ENSSFOG00015010252	polr2l	100	95.522	Scleropages_formosus
ENSELUG00000009612	RPAB5	100	98.507	ENSSMAG00000021392	polr2l	100	98.507	Scophthalmus_maximus
ENSELUG00000009612	RPAB5	100	97.015	ENSSDUG00000008725	polr2l	100	97.015	Seriola_dumerili
ENSELUG00000009612	RPAB5	100	97.015	ENSSLDG00000024029	polr2l	100	97.015	Seriola_lalandi_dorsalis
ENSELUG00000009612	RPAB5	100	100.000	ENSSARG00000007627	POLR2L	100	100.000	Sorex_araneus
ENSELUG00000009612	RPAB5	100	89.552	ENSSPUG00000005252	POLR2L	69	89.552	Sphenodon_punctatus
ENSELUG00000009612	RPAB5	100	98.507	ENSSPAG00000019322	polr2l	100	98.507	Stegastes_partitus
ENSELUG00000009612	RPAB5	100	71.642	ENSSSCG00000012839	-	100	71.642	Sus_scrofa
ENSELUG00000009612	RPAB5	100	83.582	ENSSSCG00000000461	-	100	83.582	Sus_scrofa
ENSELUG00000009612	RPAB5	100	100.000	ENSSSCG00000033068	-	100	100.000	Sus_scrofa
ENSELUG00000009612	RPAB5	100	86.567	ENSTGUG00000009757	POLR2L	100	86.567	Taeniopygia_guttata
ENSELUG00000009612	RPAB5	100	97.015	ENSTRUG00000017292	polr2l	100	97.015	Takifugu_rubripes
ENSELUG00000009612	RPAB5	100	97.015	ENSTTRG00000012496	POLR2L	100	97.015	Tursiops_truncatus
ENSELUG00000009612	RPAB5	100	100.000	ENSUAMG00000024755	-	100	100.000	Ursus_americanus
ENSELUG00000009612	RPAB5	100	65.672	ENSUAMG00000016335	-	63	65.672	Ursus_americanus
ENSELUG00000009612	RPAB5	100	100.000	ENSVVUG00000000205	POLR2L	100	100.000	Vulpes_vulpes
ENSELUG00000009612	RPAB5	100	100.000	ENSXETG00000025768	polr2l.1	100	100.000	Xenopus_tropicalis
ENSELUG00000009612	RPAB5	100	97.015	ENSXETG00000002878	polr2l.2	100	97.015	Xenopus_tropicalis
ENSELUG00000009612	RPAB5	100	98.507	ENSXMAG00000007260	polr2l	100	98.507	Xiphophorus_maculatus