EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSELUG00000009740 (Gene tree)
Gene ID: 105007881
Gene Symbol: srprb
Alias: wu:fk57h10|zgc:111820|zgc:92746
Full Name: SRP receptor subunit beta
Gene Type: protein_coding
Species: Esox_lucius
Status: putative
Strand: Minus strand
Length: 3574 bases
Position: chrLG01:35413177-35416750
Accession: 105007881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSELUP00000031991	MMR_HSR1	PF01926.23	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSELUT00000004331	-	816	XM_010866980	ENSELUP00000031991	271 (aa)	XP_010865282	UPI0005768AF1

Gene Model

Click here to download ENSELUG00000009740's gene model file

Pathways

Pathway ID	Pathway Name	Source
els03060	Protein export	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSELUG00000009740's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSELUG00000009740	srprb	96	81.538	ENSAPOG00000021219	srprb	94	81.538	Acanthochromis_polyacanthus
ENSELUG00000009740	srprb	93	83.004	ENSACIG00000014621	srprb	95	83.004	Amphilophus_citrinellus
ENSELUG00000009740	srprb	96	81.538	ENSAOCG00000017265	srprb	94	81.538	Amphiprion_ocellaris
ENSELUG00000009740	srprb	96	81.538	ENSAPEG00000024541	srprb	83	81.538	Amphiprion_percula
ENSELUG00000009740	srprb	93	80.876	ENSATEG00000014016	srprb	91	80.876	Anabas_testudineus
ENSELUG00000009740	srprb	98	79.775	ENSACLG00000016748	srprb	97	79.775	Astatotilapia_calliptera
ENSELUG00000009740	srprb	93	73.307	ENSAMXG00000044118	srprb	94	73.307	Astyanax_mexicanus
ENSELUG00000009740	srprb	98	76.404	ENSCSEG00000017194	srprb	97	76.404	Cynoglossus_semilaevis
ENSELUG00000009740	srprb	96	81.467	ENSCVAG00000004221	srprb	97	81.467	Cyprinodon_variegatus
ENSELUG00000009740	srprb	97	67.293	ENSDARG00000030949	srprb	100	67.293	Danio_rerio
ENSELUG00000009740	srprb	96	81.081	ENSFHEG00000006004	srprb	97	81.081	Fundulus_heteroclitus
ENSELUG00000009740	srprb	93	82.072	ENSGMOG00000002081	srprb	93	82.072	Gadus_morhua
ENSELUG00000009740	srprb	97	78.707	ENSGAFG00000012593	srprb	99	78.707	Gambusia_affinis
ENSELUG00000009740	srprb	97	79.848	ENSGACG00000009891	srprb	97	79.848	Gasterosteus_aculeatus
ENSELUG00000009740	srprb	98	79.775	ENSHBUG00000002145	srprb	97	79.775	Haplochromis_burtoni
ENSELUG00000009740	srprb	98	77.736	ENSHCOG00000007732	srprb	99	77.736	Hippocampus_comes
ENSELUG00000009740	srprb	93	68.127	ENSIPUG00000004177	srprb	94	68.127	Ictalurus_punctatus
ENSELUG00000009740	srprb	96	80.309	ENSKMAG00000020736	srprb	97	80.309	Kryptolebias_marmoratus
ENSELUG00000009740	srprb	98	78.652	ENSLBEG00000021483	srprb	97	78.652	Labrus_bergylta
ENSELUG00000009740	srprb	93	72.047	ENSLOCG00000009740	srprb	85	72.441	Lepisosteus_oculatus
ENSELUG00000009740	srprb	97	80.608	ENSMAMG00000011876	srprb	96	80.608	Mastacembelus_armatus
ENSELUG00000009740	srprb	93	82.677	ENSMZEG00005016621	srprb	98	82.677	Maylandia_zebra
ENSELUG00000009740	srprb	97	80.608	ENSMMOG00000012550	srprb	97	80.608	Mola_mola
ENSELUG00000009740	srprb	92	82.731	ENSMALG00000012595	srprb	92	82.731	Monopterus_albus
ENSELUG00000009740	srprb	73	79.188	ENSNBRG00000004699	srprb	91	73.733	Neolamprologus_brichardi
ENSELUG00000009740	srprb	98	79.699	ENSONIG00000003788	srprb	79	79.699	Oreochromis_niloticus
ENSELUG00000009740	srprb	97	75.665	ENSORLG00000006430	srprb	96	75.665	Oryzias_latipes
ENSELUG00000009740	srprb	94	76.562	ENSORLG00020003413	srprb	93	76.562	Oryzias_latipes_hni
ENSELUG00000009740	srprb	97	75.285	ENSORLG00015000166	srprb	96	75.285	Oryzias_latipes_hsok
ENSELUG00000009740	srprb	92	79.200	ENSOMEG00000012735	srprb	91	79.200	Oryzias_melastigma
ENSELUG00000009740	srprb	92	69.323	ENSPKIG00000013147	srprb	95	69.323	Paramormyrops_kingsleyae
ENSELUG00000009740	srprb	99	73.704	ENSPMGG00000014061	srprb	99	73.704	Periophthalmus_magnuspinnatus
ENSELUG00000009740	srprb	93	81.028	ENSPFOG00000011347	srprb	95	78.707	Poecilia_formosa
ENSELUG00000009740	srprb	94	80.469	ENSPLAG00000001156	srprb	99	80.469	Poecilia_latipinna
ENSELUG00000009740	srprb	93	80.632	ENSPMEG00000012169	srprb	98	80.632	Poecilia_mexicana
ENSELUG00000009740	srprb	92	80.800	ENSPREG00000001449	srprb	97	80.800	Poecilia_reticulata
ENSELUG00000009740	srprb	98	79.775	ENSPNYG00000005911	srprb	97	79.775	Pundamilia_nyererei
ENSELUG00000009740	srprb	93	74.104	ENSPNAG00000009983	srprb	94	74.104	Pygocentrus_nattereri
ENSELUG00000009740	srprb	97	70.722	ENSSFOG00015019355	srprb	98	70.722	Scleropages_formosus
ENSELUG00000009740	srprb	97	79.468	ENSSMAG00000013202	srprb	96	79.468	Scophthalmus_maximus
ENSELUG00000009740	srprb	97	81.369	ENSSDUG00000018746	srprb	90	81.369	Seriola_dumerili
ENSELUG00000009740	srprb	97	81.749	ENSSLDG00000020560	srprb	96	81.749	Seriola_lalandi_dorsalis
ENSELUG00000009740	srprb	100	79.061	ENSSPAG00000008898	srprb	100	79.061	Stegastes_partitus
ENSELUG00000009740	srprb	97	77.947	ENSTRUG00000022463	srprb	96	77.947	Takifugu_rubripes
ENSELUG00000009740	srprb	99	74.254	ENSTNIG00000007725	srprb	100	74.254	Tetraodon_nigroviridis
ENSELUG00000009740	srprb	94	80.859	ENSXCOG00000012585	srprb	99	80.859	Xiphophorus_couchianus
ENSELUG00000009740	srprb	94	80.469	ENSXMAG00000028725	srprb	99	80.469	Xiphophorus_maculatus